RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 THEGQ9P2T0 379 aa14.15□□□□□ -0.14
LCA5-202ENST00000392959 ROBO2Q9HCK4 1378 aa14.15□□□□□ -0.14
LCA5-202ENST00000392959 WDR17Q8IZU2 1322 aa14.15□□□□□ -0.14
LCA5-202ENST00000392959 WDR91A4D1P6 747 aa14.15□□□□□ -0.14
LCA5-202ENST00000392959 CDK8P49336 464 aa14.15□□□□□ -0.14
LCA5-202ENST00000392959 PRPSAP1Q14558 356 aa14.15□□□□□ -0.14
LCA5-202ENST00000392959 DARS2Q6PI48 645 aaKnown RBP14.15□□□□□ -0.14
LCA5-202ENST00000392959 PROM2Q8N271 834 aa14.15□□□□□ -0.14
LCA5-202ENST00000392959 CCNYQ8ND76 341 aa14.15□□□□□ -0.14
LCA5-202ENST00000392959 FLAD1Q8NFF5 587 aa14.15□□□□□ -0.14
LCA5-202ENST00000392959 LRRC53A6NM62 1247 aa14.15□□□□□ -0.15
LCA5-202ENST00000392959 MMEP08473 750 aa14.15□□□□□ -0.15
LCA5-202ENST00000392959 IFRD2Q12894 506 aaPredicted RBP14.15□□□□□ -0.15
LCA5-202ENST00000392959 NCAPG2Q86XI2 1143 aa14.15□□□□□ -0.15
LCA5-202ENST00000392959 MB21D2Q8IYB1 491 aaPredicted RBP14.15□□□□□ -0.15
LCA5-202ENST00000392959 NLGN1Q8N2Q7 840 aa14.15□□□□□ -0.15
LCA5-202ENST00000392959 DNAAF3Q8N9W5 541 aa14.15□□□□□ -0.15
LCA5-202ENST00000392959 SPDL1Q96EA4 605 aa14.15□□□□□ -0.15
LCA5-202ENST00000392959 NXF1Q9UBU9 619 aaKnown RBP14.15□□□□□ -0.15
LCA5-202ENST00000392959 IPO11Q9UI26 975 aaKnown RBP14.15□□□□□ -0.15
LCA5-202ENST00000392959 UGGT1Q9NYU2 1555 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 STAT2P52630 851 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 STX1BP61266 288 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 SYDE2Q5VT97 1194 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 CENPUQ71F23 418 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 CYB5R4Q7L1T6 521 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 TMC4Q7Z404 712 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 PCGF5Q86SE9 256 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 PYROXD1Q8WU10 500 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 ARHGAP31Q2M1Z3 1444 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 PRDM15P57071 1507 aaPredicted RBP14.14□□□□□ -0.15
LCA5-202ENST00000392959 MAPK13O15264 365 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 TEX33O43247 280 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 XPOTO43592 962 aaKnown RBP14.14□□□□□ -0.15
LCA5-202ENST00000392959 APBA3O96018 575 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 MX2P20592 715 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 ALCAMQ13740 583 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 PFKFB3Q16875 520 aaPredicted RBP14.14□□□□□ -0.15
LCA5-202ENST00000392959 CDHR1Q96JP9 859 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 HAUS8Q9BT25 410 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 MTA3Q9BTC8 594 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 PITPNM3Q9BZ71 974 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 DIS3Q9Y2L1 958 aaKnown RBP14.14□□□□□ -0.15
LCA5-202ENST00000392959 PVALEFA0A1B0GWK0 134 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 CLRN2A0PK11 232 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 CHUKO15111 745 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 ABL1P00519 1130 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 CYP2E1P05181 493 aaPredicted RBP14.14□□□□□ -0.15
LCA5-202ENST00000392959 ABCD1P33897 745 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 ZNF526Q8TF50 670 aaPredicted RBP14.14□□□□□ -0.15
LCA5-202ENST00000392959 EPC1Q9H2F5 836 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 SLC5A4Q9NY91 659 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 DNAJC12Q9UKB3 198 aa14.14□□□□□ -0.15
LCA5-202ENST00000392959 MORC2Q9Y6X9 1032 aaPredicted RBP14.14□□□□□ -0.15
LCA5-202ENST00000392959 TTC26A0AVF1 554 aa14.13□□□□□ -0.15
LCA5-202ENST00000392959 SPDYE16A6NNV3 312 aaPredicted RBP14.13□□□□□ -0.15
LCA5-202ENST00000392959 IPO5O00410 1097 aaKnown RBP14.13□□□□□ -0.15
LCA5-202ENST00000392959 OATP04181 439 aa14.13□□□□□ -0.15
LCA5-202ENST00000392959 RCAN1P53805 252 aa14.13□□□□□ -0.15
LCA5-202ENST00000392959 SPDYE2Q495Y8 402 aa14.13□□□□□ -0.15
LCA5-202ENST00000392959 FAM47CQ5HY64 1035 aa14.13□□□□□ -0.15
LCA5-202ENST00000392959 OXER1Q8TDS5 423 aa14.13□□□□□ -0.15
LCA5-202ENST00000392959 N4BP2L2Q92802 583 aaPredicted RBP14.13□□□□□ -0.15
LCA5-202ENST00000392959 TSPYL2Q9H2G4 693 aaPredicted RBP14.13□□□□□ -0.15
LCA5-202ENST00000392959 TLK1Q9UKI8 766 aa14.13□□□□□ -0.15
LCA5-202ENST00000392959 TOM1L1O75674 476 aa14.13□□□□□ -0.15
LCA5-202ENST00000392959 ARL4AP40617 200 aa14.13□□□□□ -0.15
LCA5-202ENST00000392959 PLCB4Q15147 1175 aa14.13□□□□□ -0.15
LCA5-202ENST00000392959 EFHD1Q9BUP0 239 aa14.13□□□□□ -0.15
LCA5-202ENST00000392959 SPC25Q9HBM1 224 aa14.13□□□□□ -0.15
LCA5-202ENST00000392959 PI4KBQ9UBF8 816 aa14.13□□□□□ -0.15
LCA5-202ENST00000392959 NEDD4P46934 1319 aa14.13□□□□□ -0.15
LCA5-202ENST00000392959 SYNGAP1Q96PV0 1343 aa14.13□□□□□ -0.15
LCA5-202ENST00000392959 MED7O43513 233 aa14.13□□□□□ -0.15
LCA5-202ENST00000392959 ANKRD20A4Q4UJ75 823 aa14.13□□□□□ -0.15
LCA5-202ENST00000392959 ANKRD20A8PQ5CZ79 823 aa14.13□□□□□ -0.15
LCA5-202ENST00000392959 ANKRD20A2Q5SQ80 823 aa14.13□□□□□ -0.15
LCA5-202ENST00000392959 ANKRD20A1Q5TYW2 823 aa14.13□□□□□ -0.15
LCA5-202ENST00000392959 NOP53Q9NZM5 478 aaKnown RBP14.13□□□□□ -0.15
LCA5-202ENST00000392959 KCTD6Q8NC69 237 aa14.13□□□□□ -0.15
LCA5-202ENST00000392959 KIF2CQ99661 725 aa14.13□□□□□ -0.15
LCA5-202ENST00000392959 NUB1Q9Y5A7 615 aa14.13□□□□□ -0.15
LCA5-202ENST00000392959 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.13□□□□□ -0.15
LCA5-202ENST00000392959 POTEMA6NI47 508 aa14.12□□□□□ -0.15
LCA5-202ENST00000392959 PPEF1O14829 653 aaPredicted RBP14.12□□□□□ -0.15
LCA5-202ENST00000392959 SRGAP2BP0DMP2 458 aa14.12□□□□□ -0.15
LCA5-202ENST00000392959 CTTNQ14247 550 aaKnown RBP14.12□□□□□ -0.15
LCA5-202ENST00000392959 DHX40Q8IX18 779 aaKnown RBP14.12□□□□□ -0.15
LCA5-202ENST00000392959 ALDH8A1Q9H2A2 487 aaPredicted RBP14.12□□□□□ -0.15
LCA5-202ENST00000392959 EFCAB6Q5THR3 1501 aa14.12□□□□□ -0.15
LCA5-202ENST00000392959 RFX7Q2KHR2 1363 aa14.12□□□□□ -0.15
LCA5-202ENST00000392959 MAP3K7O43318 606 aa14.12□□□□□ -0.15
LCA5-202ENST00000392959 PRR29P0C7W0 189 aa14.12□□□□□ -0.15
LCA5-202ENST00000392959 CD58P19256 250 aa14.12□□□□□ -0.15
LCA5-202ENST00000392959 ESRRGP62508 458 aa14.12□□□□□ -0.15
LCA5-202ENST00000392959 SPARCL1Q14515 664 aa14.12□□□□□ -0.15
LCA5-202ENST00000392959 FAM83BQ5T0W9 1011 aa14.12□□□□□ -0.15
LCA5-202ENST00000392959 GSPT2Q8IYD1 628 aaKnown RBP14.12□□□□□ -0.15
LCA5-202ENST00000392959 OSBPL9Q96SU4 736 aa14.12□□□□□ -0.15
LCA5-202ENST00000392959 GOLGA8IPA6NC78 632 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms