RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 TCERG1LQ5VWI1 586 aa11.92□□□□□ -0.5
BRF1-204ENST00000392557 CC2D2BQ6DHV5 1058 aa11.92□□□□□ -0.5
BRF1-204ENST00000392557 TSEN2Q8NCE0 465 aaKnown RBP11.92□□□□□ -0.5
BRF1-204ENST00000392557 DPEP1P16444 411 aa11.91□□□□□ -0.5
BRF1-204ENST00000392557 HOXA13P31271 388 aaPredicted RBP11.91□□□□□ -0.5
BRF1-204ENST00000392557 JAG1P78504 1218 aa11.91□□□□□ -0.5
BRF1-204ENST00000392557 MEA1Q16626 185 aa11.91□□□□□ -0.5
BRF1-204ENST00000392557 KIAA0753Q2KHM9 967 aa11.91□□□□□ -0.5
BRF1-204ENST00000392557 CEP85LQ5SZL2 805 aa11.91□□□□□ -0.5
BRF1-204ENST00000392557 TBC1D5Q92609 795 aa11.91□□□□□ -0.5
BRF1-204ENST00000392557 NUDT12Q9BQG2 462 aa11.91□□□□□ -0.5
BRF1-204ENST00000392557 LSM14BQ9BX40 385 aaKnown RBP11.91□□□□□ -0.5
BRF1-204ENST00000392557 CCSER1Q9C0I3 900 aa11.91□□□□□ -0.5
BRF1-204ENST00000392557 SERPINA10Q9UK55 444 aa11.91□□□□□ -0.5
BRF1-204ENST00000392557 SCN9AQ15858 1988 aa11.91□□□□□ -0.5
BRF1-204ENST00000392557 ZBTB7AO95365 584 aa11.91□□□□□ -0.5
BRF1-204ENST00000392557 SNHG28P0DPA3 235 aa11.91□□□□□ -0.5
BRF1-204ENST00000392557 ECE1P42892 770 aa11.91□□□□□ -0.5
BRF1-204ENST00000392557 APBA1Q02410 837 aa11.91□□□□□ -0.5
BRF1-204ENST00000392557 MAN2A1Q16706 1144 aa11.91□□□□□ -0.5
BRF1-204ENST00000392557 CDAN1Q8IWY9 1227 aa11.91□□□□□ -0.5
BRF1-204ENST00000392557 ZIM3Q96PE6 472 aa11.91□□□□□ -0.5
BRF1-204ENST00000392557 SPAG5Q96R06 1193 aa11.91□□□□□ -0.5
BRF1-204ENST00000392557 RAB34Q9BZG1 259 aa11.91□□□□□ -0.5
BRF1-204ENST00000392557 SEMA6BQ9H3T3 888 aa11.91□□□□□ -0.5
BRF1-204ENST00000392557 ADAMTS1Q9UHI8 967 aa11.91□□□□□ -0.5
BRF1-204ENST00000392557 PALMO75781 387 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 NDUFB10O96000 172 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 SFMBT2Q5VUG0 894 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 LARP4BQ92615 738 aaKnown RBP11.9□□□□□ -0.5
BRF1-204ENST00000392557 RIC8AQ9NPQ8 531 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 E7EVH7 732 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 KCNK3O14649 394 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 EIF3HO15372 352 aaKnown RBP eCLIP11.9□□□□□ -0.5
BRF1-204ENST00000392557 SMARCA1P28370 1054 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 PRPHP41219 470 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 SLC30A10Q6XR72 485 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 TMEM179Q6ZVK1 233 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 DNAAF5Q86Y56 855 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 KIAA0895Q8NCT3 520 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 PLAGL2Q9UPG8 496 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 ATF5Q9Y2D1 282 aaPredicted RBP11.9□□□□□ -0.5
BRF1-204ENST00000392557 MYH10P35580 1976 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 CEP104O60308 925 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 RPS6KA5O75582 802 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 MYL1P05976 194 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 KLHL30Q0D2K2 578 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 PAK2Q13177 524 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 PRPF4BQ13523 1007 aaKnown RBP11.9□□□□□ -0.5
BRF1-204ENST00000392557 CCDC174Q6PII3 467 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 SUPT20HQ8NEM7 779 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 MTMR8Q96EF0 704 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 AK8Q96MA6 479 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 CAMKK2Q96RR4 588 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 TRIM31Q9BZY9 425 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 GOLPH3Q9H4A6 298 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 PCDHA12Q9UN75 941 aa11.9□□□□□ -0.5
BRF1-204ENST00000392557 PLIN4Q96Q06 1357 aa11.9□□□□□ -0.51
BRF1-204ENST00000392557 ESYT2A0FGR8 921 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 RRP1BQ14684 758 aaKnown RBP11.89□□□□□ -0.51
BRF1-204ENST00000392557 PRR16Q569H4 304 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 MIIPQ5JXC2 388 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 EMBQ6PCB8 327 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 MSL3Q8N5Y2 521 aaKnown RBP11.89□□□□□ -0.51
BRF1-204ENST00000392557 FAM133AQ8N9E0 248 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 GLIS3Q8NEA6 775 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 AENQ8WTP8 325 aaKnown RBP11.89□□□□□ -0.51
BRF1-204ENST00000392557 MMTAG2Q9BU76 263 aaKnown RBP11.89□□□□□ -0.51
BRF1-204ENST00000392557 IDI2Q9BXS1 227 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 MYMKA6NI61 221 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 RASSF10A6NK89 507 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 STAT3P40763 770 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 UBXN2AP68543 259 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 ACER1Q8TDN7 264 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 UBLCP1Q8WVY7 318 aaPredicted RBP11.89□□□□□ -0.51
BRF1-204ENST00000392557 TMEM39BQ9GZU3 492 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 HDAC9Q9UKV0 1011 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.89□□□□□ -0.51
BRF1-204ENST00000392557 LRRC37AA6NMS7 1700 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 hCG_1984214I3L0E3 225 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 GLI1P08151 1106 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 FAM153BP0C7A2 387 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 RDXP35241 583 aaKnown RBP11.89□□□□□ -0.51
BRF1-204ENST00000392557 ZNF76P36508 570 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 USP8P40818 1118 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 SEC24CP53992 1094 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 FAM153CQ494X1 144 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 HERC4Q5GLZ8 1057 aaPredicted RBP11.89□□□□□ -0.51
BRF1-204ENST00000392557 HAUS3Q68CZ6 603 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 GBP6Q6ZN66 633 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 MMGT1Q8N4V1 131 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 ZNF713Q8N859 430 aaPredicted RBP11.89□□□□□ -0.51
BRF1-204ENST00000392557 DDX12PQ92771 950 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 CUEDC2Q9H467 287 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 SEPT11Q9NVA2 429 aaKnown RBP11.89□□□□□ -0.51
BRF1-204ENST00000392557 RGS17Q9UGC6 210 aaPredicted RBP11.89□□□□□ -0.51
BRF1-204ENST00000392557 FAM153AQ9UHL3 310 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 SALL4Q9UJQ4 1053 aa11.89□□□□□ -0.51
BRF1-204ENST00000392557 A0A1W2PRG0 241 aa11.88□□□□□ -0.51
BRF1-204ENST00000392557 SPDYE3A6NKU9 549 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms