RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 COG2Q14746 738 aa20.94■□□□□ 0.94
CCDC50-202ENST00000392456 SH3D19Q5HYK7 790 aa20.94■□□□□ 0.94
CCDC50-202ENST00000392456 CDCA2Q69YH5 1023 aaPredicted RBP20.94■□□□□ 0.94
CCDC50-202ENST00000392456 PNMA8AQ86V59 439 aaPredicted RBP20.94■□□□□ 0.94
CCDC50-202ENST00000392456 ELOA2Q8IYF1 753 aaPredicted RBP20.94■□□□□ 0.94
CCDC50-202ENST00000392456 PURBQ96QR8 312 aaKnown RBP20.94■□□□□ 0.94
CCDC50-202ENST00000392456 CCSER1Q9C0I3 900 aa20.94■□□□□ 0.94
CCDC50-202ENST00000392456 RRAGCQ9HB90 399 aa20.94■□□□□ 0.94
CCDC50-202ENST00000392456 KCNMB3Q9NPA1 279 aa20.94■□□□□ 0.94
CCDC50-202ENST00000392456 SCN4AP35499 1836 aa20.94■□□□□ 0.94
CCDC50-202ENST00000392456 SARSP49591 514 aaKnown RBP20.94■□□□□ 0.94
CCDC50-202ENST00000392456 RAB27AP51159 221 aa20.94■□□□□ 0.94
CCDC50-202ENST00000392456 NLRP12P59046 1061 aa20.94■□□□□ 0.94
CCDC50-202ENST00000392456 CABP7Q86V35 215 aa20.94■□□□□ 0.94
CCDC50-202ENST00000392456 CEP57L1Q8IYX8 460 aa20.94■□□□□ 0.94
CCDC50-202ENST00000392456 ZNF408Q9H9D4 720 aa20.94■□□□□ 0.94
CCDC50-202ENST00000392456 MYO1FO00160 1098 aa20.93■□□□□ 0.94
CCDC50-202ENST00000392456 ZBED4O75132 1171 aa20.93■□□□□ 0.94
CCDC50-202ENST00000392456 CCT5P48643 541 aa20.93■□□□□ 0.94
CCDC50-202ENST00000392456 FXR2P51116 673 aaKnown RBP eCLIP20.93■□□□□ 0.94
CCDC50-202ENST00000392456 TMEM132BQ14DG7 1078 aa20.93■□□□□ 0.94
CCDC50-202ENST00000392456 ARMC3Q5W041 872 aa20.93■□□□□ 0.94
CCDC50-202ENST00000392456 ANKRD13AQ8IZ07 590 aa20.93■□□□□ 0.94
CCDC50-202ENST00000392456 RPUSD2Q8IZ73 545 aaKnown RBP20.93■□□□□ 0.94
CCDC50-202ENST00000392456 LRWD1Q9UFC0 647 aa20.93■□□□□ 0.94
CCDC50-202ENST00000392456 MAN1B1Q9UKM7 699 aa20.93■□□□□ 0.94
CCDC50-202ENST00000392456 ADAMTS5Q9UNA0 930 aa20.93■□□□□ 0.94
CCDC50-202ENST00000392456 PARP14Q460N5 1801 aa20.93■□□□□ 0.94
CCDC50-202ENST00000392456 PLCG1P19174 1290 aa20.93■□□□□ 0.94
CCDC50-202ENST00000392456 PPP2R3AQ06190 1150 aa20.93■□□□□ 0.94
CCDC50-202ENST00000392456 DHX40Q8IX18 779 aaKnown RBP20.93■□□□□ 0.94
CCDC50-202ENST00000392456 SPATA20Q8TB22 786 aa20.93■□□□□ 0.94
CCDC50-202ENST00000392456 AK8Q96MA6 479 aa20.93■□□□□ 0.94
CCDC50-202ENST00000392456 ZNF214Q9UL59 606 aaPredicted RBP20.93■□□□□ 0.94
CCDC50-202ENST00000392456 L1RE1Q9UN81 338 aa20.93■□□□□ 0.94
CCDC50-202ENST00000392456 STAT6P42226 847 aa20.92■□□□□ 0.94
CCDC50-202ENST00000392456 MAGEA8P43361 318 aa20.92■□□□□ 0.94
CCDC50-202ENST00000392456 HSD17B4P51659 736 aa20.92■□□□□ 0.94
CCDC50-202ENST00000392456 ECM1Q16610 540 aa20.92■□□□□ 0.94
CCDC50-202ENST00000392456 HSP90B2PQ58FF3 399 aa20.92■□□□□ 0.94
CCDC50-202ENST00000392456 NT5DC1Q5TFE4 455 aa20.92■□□□□ 0.94
CCDC50-202ENST00000392456 RRAGBQ5VZM2 374 aa20.92■□□□□ 0.94
CCDC50-202ENST00000392456 RASSF8Q8NHQ8 419 aa20.92■□□□□ 0.94
CCDC50-202ENST00000392456 ETNPPLQ8TBG4 499 aa20.92■□□□□ 0.94
CCDC50-202ENST00000392456 GOLGA1Q92805 767 aa20.92■□□□□ 0.94
CCDC50-202ENST00000392456 KDM4CQ9H3R0 1056 aa20.92■□□□□ 0.94
CCDC50-202ENST00000392456 IMPACTQ9P2X3 320 aa20.92■□□□□ 0.94
CCDC50-202ENST00000392456 PCDHA12Q9UN75 941 aa20.92■□□□□ 0.94
CCDC50-202ENST00000392456 SPDYE16A6NNV3 312 aaPredicted RBP20.92■□□□□ 0.94
CCDC50-202ENST00000392456 SKAP2O75563 359 aaPredicted RBP20.92■□□□□ 0.94
CCDC50-202ENST00000392456 STAT3P40763 770 aa20.92■□□□□ 0.94
CCDC50-202ENST00000392456 DPYDQ12882 1025 aa20.92■□□□□ 0.94
CCDC50-202ENST00000392456 CUL4BQ13620 913 aa20.92■□□□□ 0.94
CCDC50-202ENST00000392456 TLDC1Q6P9B6 456 aa20.92■□□□□ 0.94
CCDC50-202ENST00000392456 RBM46Q8TBY0 533 aaKnown RBP20.92■□□□□ 0.94
CCDC50-202ENST00000392456 ZBTB10Q96DT7 871 aa20.92■□□□□ 0.94
CCDC50-202ENST00000392456 IGLV3-22A0A075B6J6 115 aa20.91■□□□□ 0.94
CCDC50-202ENST00000392456 BECN2A8MW95 431 aa20.91■□□□□ 0.94
CCDC50-202ENST00000392456 CCP110O43303 1012 aa20.91■□□□□ 0.94
CCDC50-202ENST00000392456 MARCH6O60337 910 aa20.91■□□□□ 0.94
CCDC50-202ENST00000392456 FSBPO95073 299 aa20.91■□□□□ 0.94
CCDC50-202ENST00000392456 CIITAP33076 1130 aa20.91■□□□□ 0.94
CCDC50-202ENST00000392456 KANK3Q6NY19 840 aa20.91■□□□□ 0.94
CCDC50-202ENST00000392456 IL31RAQ8NI17 732 aa20.91■□□□□ 0.94
CCDC50-202ENST00000392456 CTDP1Q9Y5B0 961 aaPredicted RBP20.91■□□□□ 0.94
CCDC50-202ENST00000392456 CYP3A4P08684 503 aa20.9■□□□□ 0.94
CCDC50-202ENST00000392456 SKIDA1Q1XH10 827 aa20.9■□□□□ 0.94
CCDC50-202ENST00000392456 ERO1BQ86YB8 467 aa20.9■□□□□ 0.94
CCDC50-202ENST00000392456 CCDC150Q8NCX0 1101 aa20.9■□□□□ 0.94
CCDC50-202ENST00000392456 AFAP1L1Q8TED9 768 aa20.9■□□□□ 0.94
CCDC50-202ENST00000392456 PTPRFP10586 1907 aa20.9■□□□□ 0.94
CCDC50-202ENST00000392456 WDR90Q96KV7 1748 aa20.9■□□□□ 0.94
CCDC50-202ENST00000392456 MSH4O15457 936 aa20.9■□□□□ 0.94
CCDC50-202ENST00000392456 RPS6P62753 249 aaKnown RBP20.9■□□□□ 0.94
CCDC50-202ENST00000392456 PPATQ06203 517 aa20.9■□□□□ 0.94
CCDC50-202ENST00000392456 GRB10Q13322 594 aa20.9■□□□□ 0.94
CCDC50-202ENST00000392456 Q4G0T1 1027 aa20.9■□□□□ 0.94
CCDC50-202ENST00000392456 SNRNP48Q6IEG0 339 aaKnown RBP20.9■□□□□ 0.94
CCDC50-202ENST00000392456 MOXD1Q6UVY6 613 aa20.9■□□□□ 0.94
CCDC50-202ENST00000392456 GADL1Q6ZQY3 521 aa20.9■□□□□ 0.94
CCDC50-202ENST00000392456 AOPEPQ8N6M6 819 aa20.9■□□□□ 0.94
CCDC50-202ENST00000392456 PNMA5Q96PV4 448 aa20.9■□□□□ 0.94
CCDC50-202ENST00000392456 CHCHD3Q9NX63 227 aaKnown RBP20.9■□□□□ 0.94
CCDC50-202ENST00000392456 COL11A1P12107 1806 aaPredicted RBP20.9■□□□□ 0.94
CCDC50-202ENST00000392456 FRMD3A2A2Y4 597 aa20.89■□□□□ 0.94
CCDC50-202ENST00000392456 SPDYE5A6NIY4 337 aa20.89■□□□□ 0.94
CCDC50-202ENST00000392456 SHOX2O60902 331 aaPredicted RBP20.89■□□□□ 0.94
CCDC50-202ENST00000392456 PHACTR2O75167 634 aa20.89■□□□□ 0.94
CCDC50-202ENST00000392456 ABCD1P33897 745 aa20.89■□□□□ 0.94
CCDC50-202ENST00000392456 GJA5P36382 358 aa20.89■□□□□ 0.94
CCDC50-202ENST00000392456 ZNF76P36508 570 aa20.89■□□□□ 0.94
CCDC50-202ENST00000392456 PDIA5Q14554 519 aa20.89■□□□□ 0.94
CCDC50-202ENST00000392456 C3orf20Q8ND61 904 aa20.89■□□□□ 0.94
CCDC50-202ENST00000392456 SYTL5Q8TDW5 730 aaPredicted RBP20.89■□□□□ 0.94
CCDC50-202ENST00000392456 OPTNQ96CV9 577 aa20.89■□□□□ 0.94
CCDC50-202ENST00000392456 HOOK1Q9UJC3 728 aaKnown RBP20.89■□□□□ 0.94
CCDC50-202ENST00000392456 MRFAP1Q9Y605 127 aa20.89■□□□□ 0.94
CCDC50-202ENST00000392456 TMEM266Q2M3C6 531 aa20.89■□□□□ 0.93
CCDC50-202ENST00000392456 KCNK18Q7Z418 384 aa20.89■□□□□ 0.93
CCDC50-202ENST00000392456 CEP112Q8N8E3 955 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms