RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 CCDC140Q96MF4 163 aa3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 CLIC6Q96NY7 704 aa3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 L2HGDHQ9H9P8 463 aa3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 ARHGEF4Q9NR80 690 aa3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 GPR27Q9NS67 375 aa3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 TMA7Q9Y2S6 64 aaKnown RBP3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 FAM90A27PA6NNH2 459 aa3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 ZNF839A8K0R7 811 aa3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 NPIPB8E9PQR5 432 aa3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 MPIG6BO95866 241 aa3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 AMY2AP04746 511 aa3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 CYP1A1P04798 512 aaPredicted RBP3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 CHGBP05060 677 aa3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 AMY2BP19961 511 aa3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 GJA4P35212 333 aa3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 GDF5P43026 501 aa3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 PFKPQ01813 784 aa3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 TUSC3Q13454 348 aa3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 TOP3AQ13472 1001 aaPredicted RBP3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 SERINC3Q13530 473 aa3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 SEC23AQ15436 765 aa3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 SMAD2Q15796 467 aaKnown RBP3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 SKIDA1Q1XH10 827 aa3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 PAN2Q504Q3 1202 aaKnown RBP3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 YOD1Q5VVQ6 348 aaPredicted RBP3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 TRMT10BQ6PF06 316 aaKnown RBP3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 LBX2Q6XYB7 198 aa3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 LARP4Q71RC2 724 aaKnown RBP eCLIP3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 FAM124AQ86V42 546 aa3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 IL17DQ8TAD2 202 aa3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 RNPC3Q96LT9 517 aaKnown RBP3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 CCSER2Q9H7U1 834 aa3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 DLL4Q9NR61 685 aa3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 IFT57Q9NWB7 429 aa3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 PRKAG3Q9UGI9 489 aa3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 ZFP69BQ9UJL9 534 aa3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 STRIP2Q9ULQ0 834 aa3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 ZFR2Q9UPR6 939 aaKnown RBP3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 ZDHHC9Q9Y397 364 aa3.05□□□□□ -1.92
SNORA40.19-201ENST00000390846 BLACEA4D250 179 aa3.04□□□□□ -1.92
SNORA40.19-201ENST00000390846 MUSKO15146 869 aa3.04□□□□□ -1.92
SNORA40.19-201ENST00000390846 KLF4O43474 513 aa3.04□□□□□ -1.92
SNORA40.19-201ENST00000390846 C1SP09871 688 aa3.04□□□□□ -1.92
SNORA40.19-201ENST00000390846 AMPD3Q01432 767 aa3.04□□□□□ -1.92
SNORA40.19-201ENST00000390846 PLEKHG6Q3KR16 790 aa3.04□□□□□ -1.92
SNORA40.19-201ENST00000390846 SV2CQ496J9 727 aa3.04□□□□□ -1.92
SNORA40.19-201ENST00000390846 TM4SF20Q53R12 229 aa3.04□□□□□ -1.92
SNORA40.19-201ENST00000390846 FSTL4Q6MZW2 842 aa3.04□□□□□ -1.92
SNORA40.19-201ENST00000390846 PLEKHH3Q7Z736 793 aa3.04□□□□□ -1.92
SNORA40.19-201ENST00000390846 TAX1BP1Q86VP1 789 aa3.04□□□□□ -1.92
SNORA40.19-201ENST00000390846 RAVER1Q8IY67 606 aaKnown RBP3.04□□□□□ -1.92
SNORA40.19-201ENST00000390846 BCL6BQ8N143 479 aaPredicted RBP3.04□□□□□ -1.92
SNORA40.19-201ENST00000390846 CRACR2BQ8N4Y2 399 aaPredicted RBP3.04□□□□□ -1.92
SNORA40.19-201ENST00000390846 CACTINQ8WUQ7 758 aaKnown RBP3.04□□□□□ -1.92
SNORA40.19-201ENST00000390846 ARMC5Q96C12 935 aa3.04□□□□□ -1.92
SNORA40.19-201ENST00000390846 NEIL1Q96FI4 390 aaPredicted RBP3.04□□□□□ -1.92
SNORA40.19-201ENST00000390846 IER2Q9BTL4 223 aa3.04□□□□□ -1.92
SNORA40.19-201ENST00000390846 OSBPL2Q9H1P3 480 aa3.04□□□□□ -1.92
SNORA40.19-201ENST00000390846 IKZF4Q9H2S9 585 aa3.04□□□□□ -1.92
SNORA40.19-201ENST00000390846 ZNF408Q9H9D4 720 aa3.04□□□□□ -1.92
SNORA40.19-201ENST00000390846 PCDH12Q9NPG4 1184 aa3.04□□□□□ -1.92
SNORA40.19-201ENST00000390846 GABBR1Q9UBS5 961 aa3.04□□□□□ -1.92
SNORA40.19-201ENST00000390846 FAM221BA6H8Z2 402 aa3.03□□□□□ -1.92
SNORA40.19-201ENST00000390846 TPD52L2O43399 206 aaKnown RBP3.03□□□□□ -1.92
SNORA40.19-201ENST00000390846 PEX14O75381 377 aa3.03□□□□□ -1.92
SNORA40.19-201ENST00000390846 DGKIO75912 1065 aa3.03□□□□□ -1.92
SNORA40.19-201ENST00000390846 C6orf222P0C671 652 aaPredicted RBP3.03□□□□□ -1.92
SNORA40.19-201ENST00000390846 GLRBP48167 497 aa3.03□□□□□ -1.92
SNORA40.19-201ENST00000390846 IGBP1P78318 339 aa3.03□□□□□ -1.92
SNORA40.19-201ENST00000390846 ARID5AQ03989 594 aa3.03□□□□□ -1.92
SNORA40.19-201ENST00000390846 CHRNA2Q15822 529 aa3.03□□□□□ -1.92
SNORA40.19-201ENST00000390846 SPTY2D1Q68D10 685 aaPredicted RBP3.03□□□□□ -1.92
SNORA40.19-201ENST00000390846 RSPO2Q6UXX9 243 aaPredicted RBP3.03□□□□□ -1.92
SNORA40.19-201ENST00000390846 LDLRAD3Q86YD5 345 aa3.03□□□□□ -1.92
SNORA40.19-201ENST00000390846 AMER2Q8N7J2 671 aa3.03□□□□□ -1.92
SNORA40.19-201ENST00000390846 CDK5RAP1Q96SZ6 601 aaKnown RBP3.03□□□□□ -1.92
SNORA40.19-201ENST00000390846 PHF20Q9BVI0 1012 aa3.03□□□□□ -1.92
SNORA40.19-201ENST00000390846 FAM126AQ9BYI3 521 aaPredicted RBP3.03□□□□□ -1.92
SNORA40.19-201ENST00000390846 AGO3Q9H9G7 860 aaKnown RBP3.03□□□□□ -1.92
SNORA40.19-201ENST00000390846 ACTR10Q9NZ32 417 aa3.03□□□□□ -1.92
SNORA40.19-201ENST00000390846 BTBD7Q9P203 1132 aa3.03□□□□□ -1.92
SNORA40.19-201ENST00000390846 CHPF2Q9P2E5 772 aa3.03□□□□□ -1.92
SNORA40.19-201ENST00000390846 COA3Q9Y2R0 106 aaPredicted RBP3.03□□□□□ -1.92
SNORA40.19-201ENST00000390846 COL4A3BPQ9Y5P4 624 aa3.03□□□□□ -1.92
SNORA40.19-201ENST00000390846 SLC30A1Q9Y6M5 507 aa3.03□□□□□ -1.92
SNORA40.19-201ENST00000390846 WNT9AO14904 365 aa3.02□□□□□ -1.93
SNORA40.19-201ENST00000390846 U2SURPO15042 1029 aaKnown RBP3.02□□□□□ -1.93
SNORA40.19-201ENST00000390846 ADCY3O60266 1144 aa3.02□□□□□ -1.93
SNORA40.19-201ENST00000390846 RAD17O75943 681 aa3.02□□□□□ -1.93
SNORA40.19-201ENST00000390846 DBPQ10586 325 aaPredicted RBP3.02□□□□□ -1.93
SNORA40.19-201ENST00000390846 NFYCQ13952 458 aa3.02□□□□□ -1.93
SNORA40.19-201ENST00000390846 STILQ15468 1287 aa3.02□□□□□ -1.93
SNORA40.19-201ENST00000390846 FOXB2Q5VYV0 432 aa3.02□□□□□ -1.93
SNORA40.19-201ENST00000390846 LARP1BQ659C4 914 aaKnown RBP3.02□□□□□ -1.93
SNORA40.19-201ENST00000390846 TRIM68Q6AZZ1 485 aa3.02□□□□□ -1.93
SNORA40.19-201ENST00000390846 STYK1Q6J9G0 422 aa3.02□□□□□ -1.93
SNORA40.19-201ENST00000390846 ZNF627Q7L945 461 aa3.02□□□□□ -1.93
SNORA40.19-201ENST00000390846 ZNF575Q86XF7 245 aa3.02□□□□□ -1.93
SNORA40.19-201ENST00000390846 GPR135Q8IZ08 494 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms