RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 ETFBKMTQ8IXQ9 262 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 FAM126BQ8IXS8 530 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 FAM26EQ8N5C1 309 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 USHBP1Q8N6Y0 703 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF655Q8N720 491 aaPredicted RBP-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 NAT16Q8N8M0 369 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 DAGLBQ8NCG7 672 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 DNAJB8Q8NHS0 232 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 MAFAQ8NHW3 353 aaPredicted RBP-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 GPBAR1Q8TDU6 330 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 SNX29Q8TEQ0 813 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 XAGE3Q8WTP9 111 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 RNF141Q8WVD5 230 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 JARID2Q92833 1246 aaPredicted RBP-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 ELMO3Q96BJ8 720 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 SARAFQ96BY9 339 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 MIEF2Q96C03 454 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 RNF31Q96EP0 1072 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 MYEOVQ96EZ4 313 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 TCTN2Q96GX1 697 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 VCPIP1Q96JH7 1222 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 ZSWIM3Q96MP5 696 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 UROC1Q96N76 676 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 FAM193BQ96PV7 902 aaPredicted RBP-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 UHRF1Q96T88 793 aaPredicted RBP-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 CTRCQ99895 268 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 HEPHQ9BQS7 1158 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 TMEM204Q9BSN7 226 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 YIPF4Q9BSR8 244 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 CDADC1Q9BWV3 514 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 CARD11Q9BXL7 1154 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 MOV10L1Q9BXT6 1211 aaKnown RBP-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 EMILIN2Q9BXX0 1053 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 SLC46A2Q9BY10 475 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 GPR87Q9BY21 358 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 HDAC8Q9BY41 377 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 WDR11Q9BZH6 1224 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 GFRA4Q9GZZ7 299 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 MKRN2Q9H000 416 aaKnown RBP-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 VPS16Q9H269 839 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 KLK15Q9H2R5 256 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 CHRDQ9H2X0 955 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 FBRSQ9HAH7 460 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 LIN7BQ9HAP6 207 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 GPBP1L1Q9HC44 474 aaPredicted RBP-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 CCDC177Q9NQR7 707 aaPredicted RBP-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 POLR3EQ9NVU0 708 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 FAM120CQ9NX05 1096 aaKnown RBP-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 ANKFY1Q9P2R3 1169 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 ARPP21Q9UBL0 812 aaPredicted RBP-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 ADAMTS1Q9UHI8 967 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 PUF60Q9UHX1 559 aaKnown RBP-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 PCDHB5Q9Y5E4 795 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 NDUFB9Q9Y6M9 179 aa-0.07□□□□□ -2.42
TRAJ28-201ENST00000390509 MUC12Q9UKN1 5478 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 MAST3O60307 1309 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 ATXN2Q99700 1313 aaKnown RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF318Q5VUA4 2279 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 IGKV3D-15A0A087WSY6 115 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 GAGE12BA1L429 117 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 PIPSLA2A3N6 862 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 KLRG2A4D1S0 409 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 PALM3A6NDB9 673 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 GAGE12HA6NDE8 117 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 PRR23AA6NEV1 266 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 ARID3CA6NKF2 412 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 TMEM200CA6NKL6 621 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 GRXCR1A8MXD5 290 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 B4E1Z4 1266 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 MATN2O00339 956 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 EREGO14944 169 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 SLC28A2O43868 658 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 EXTL3O43909 919 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF500O60304 480 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 CUTAO60888 179 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 KLHL18O94889 574 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 FBXO21O94952 628 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 KNG1P01042 644 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 CRYABP02511 175 aaKnown RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 CKMP06732 381 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF883P0CG24 379 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF888P0CJ79 500 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 DUX4L4P0CJ87 422 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 PCSK2P16519 638 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 DRD4P21917 467 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 ITPKAP23677 461 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 BRD2P25440 801 aaKnown RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 MPLP40238 635 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 STAT5AP42229 794 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 ZAP70P43403 619 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 GRIA4P48058 902 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 RARRES1P49788 294 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 MLLT10P55197 1068 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 RRP1P56182 461 aaKnown RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 CHMP4BP1P59074 171 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 RNF4P78317 190 aa-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 IRX6P78412 446 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 SIM1P81133 766 aaPredicted RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 MRPS35P82673 323 aaKnown RBP-0.08□□□□□ -2.42
TRAJ28-201ENST00000390509 HTRA4P83105 476 aaPredicted RBP-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms