RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 VAMP4O75379 141 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 CSTBP04080 98 aaKnown RBP7.53□□□□□ -1.2
TRAV35-201ENST00000390462 SLFN14P0C7P3 912 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 ELF1P32519 619 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 DNM2P50570 870 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 ERVK-24P63145 666 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 PTSQ03393 145 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 PDCD1Q15116 288 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 CCDC92Q53HC0 331 aaPredicted RBP7.53□□□□□ -1.2
TRAV35-201ENST00000390462 FAM47CQ5HY64 1035 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 PGBD2Q6P3X8 592 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 SPOCD1Q6ZMY3 1216 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 FASTKD5Q7L8L6 764 aaKnown RBP7.53□□□□□ -1.2
TRAV35-201ENST00000390462 PPIL6Q8IXY8 311 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 PRR18Q8N4B5 295 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 ZNF610Q8N9Z0 462 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 SLC30A5Q8TAD4 765 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 LRTOMTQ8WZ04 291 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 PHKBQ93100 1093 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 PAWRQ96IZ0 340 aaKnown RBP7.53□□□□□ -1.2
TRAV35-201ENST00000390462 AP1M1Q9BXS5 423 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 PRKRIP1Q9H875 184 aaPredicted RBP7.53□□□□□ -1.2
TRAV35-201ENST00000390462 STARD7Q9NQZ5 370 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 ZNF277Q9NRM2 450 aaPredicted RBP7.53□□□□□ -1.2
TRAV35-201ENST00000390462 IFT80Q9P2H3 777 aaPredicted RBP7.53□□□□□ -1.2
TRAV35-201ENST00000390462 CCDC39Q9UFE4 941 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 TMEM98Q9Y2Y6 226 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 PCDHGC5Q9Y5F6 944 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 NPFFR2Q9Y5X5 522 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 GPR45Q9Y5Y3 372 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 ADGRL1O94910 1474 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 ABCC10Q5T3U5 1492 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 ABCA5Q8WWZ7 1642 aa7.52□□□□□ -1.2
TRAV35-201ENST00000390462 CCDC66A2RUB6 948 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 H7C1W4 665 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 EIF3FO00303 357 aaPredicted RBP7.52□□□□□ -1.21
TRAV35-201ENST00000390462 ADAMTS3O15072 1205 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 KPNA5O15131 536 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 GFRA3O60609 400 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 TGFB3P10600 412 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 RPS6KB1P23443 525 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 ADD2P35612 726 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 SMAD3P84022 425 aaKnown RBP7.52□□□□□ -1.21
TRAV35-201ENST00000390462 KIF23Q02241 960 aaPredicted RBP7.52□□□□□ -1.21
TRAV35-201ENST00000390462 ALDH6A1Q02252 535 aaKnown RBP7.52□□□□□ -1.21
TRAV35-201ENST00000390462 CNN3Q15417 329 aaKnown RBP7.52□□□□□ -1.21
TRAV35-201ENST00000390462 SMAD2Q15796 467 aaKnown RBP7.52□□□□□ -1.21
TRAV35-201ENST00000390462 TAF12Q16514 161 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 NKG7Q16617 165 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 ANO6Q4KMQ2 910 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 FKBP15Q5T1M5 1219 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 ELMSAN1Q6PJG2 1045 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 LBX2Q6XYB7 198 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 OTOP1Q7RTM1 612 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 GALNT5Q7Z7M9 940 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 FIBCD1Q8N539 461 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 TRAPPC12Q8WVT3 735 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 TMEM41AQ96HV5 264 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 ZSCAN31Q96LW9 406 aaPredicted RBP7.52□□□□□ -1.21
TRAV35-201ENST00000390462 LRFN3Q9BTN0 628 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 TTLL2Q9BWV7 592 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 PLEKHA5Q9HAU0 1116 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 HELLSQ9NRZ9 838 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 SERPINB13Q9UIV8 391 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 FBXL21Q9UKT6 434 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 PADI4Q9UM07 663 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 PCDHB12Q9Y5F1 795 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 SPO11Q9Y5K1 396 aa7.52□□□□□ -1.21
TRAV35-201ENST00000390462 ANKRD18BA2A2Z9 1011 aa7.51□□□□□ -1.21
TRAV35-201ENST00000390462 H7C1D1 291 aa7.51□□□□□ -1.21
TRAV35-201ENST00000390462 WNT9AO14904 365 aa7.51□□□□□ -1.21
TRAV35-201ENST00000390462 GSTA4O15217 222 aa7.51□□□□□ -1.21
TRAV35-201ENST00000390462 ST8SIA5O15466 376 aa7.51□□□□□ -1.21
TRAV35-201ENST00000390462 NDUFS2O75306 463 aa7.51□□□□□ -1.21
TRAV35-201ENST00000390462 ZBTB48P10074 688 aaPredicted RBP7.51□□□□□ -1.21
TRAV35-201ENST00000390462 ITIH2P19823 946 aa7.51□□□□□ -1.21
TRAV35-201ENST00000390462 HTR1BP28222 390 aa7.51□□□□□ -1.21
TRAV35-201ENST00000390462 CDC25BP30305 580 aa7.51□□□□□ -1.21
TRAV35-201ENST00000390462 AGFG1P52594 562 aaKnown RBP7.51□□□□□ -1.21
TRAV35-201ENST00000390462 MAPK10P53779 464 aa7.51□□□□□ -1.21
TRAV35-201ENST00000390462 RNF4P78317 190 aa7.51□□□□□ -1.21
TRAV35-201ENST00000390462 SCRN1Q12765 414 aa7.51□□□□□ -1.21
TRAV35-201ENST00000390462 KIF22Q14807 665 aa7.51□□□□□ -1.21
TRAV35-201ENST00000390462 PGS1Q32NB8 556 aa7.51□□□□□ -1.21
TRAV35-201ENST00000390462 HSF5Q4G112 596 aaPredicted RBP7.51□□□□□ -1.21
TRAV35-201ENST00000390462 GPATCH4Q5T3I0 446 aaKnown RBP7.51□□□□□ -1.21
TRAV35-201ENST00000390462 ITPRIPL1Q6GPH6 555 aa7.51□□□□□ -1.21
TRAV35-201ENST00000390462 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.51□□□□□ -1.21
TRAV35-201ENST00000390462 CHCHD4Q8N4Q1 142 aa7.51□□□□□ -1.21
TRAV35-201ENST00000390462 CISD2Q8N5K1 135 aaKnown RBP7.51□□□□□ -1.21
TRAV35-201ENST00000390462 FBXW5Q969U6 566 aa7.51□□□□□ -1.21
TRAV35-201ENST00000390462 FERMT2Q96AC1 680 aa7.51□□□□□ -1.21
TRAV35-201ENST00000390462 LTV1Q96GA3 475 aaPredicted RBP7.51□□□□□ -1.21
TRAV35-201ENST00000390462 ABHD17AQ96GS6 310 aa7.51□□□□□ -1.21
TRAV35-201ENST00000390462 ZDHHC15Q96MV8 337 aa7.51□□□□□ -1.21
TRAV35-201ENST00000390462 BARD1Q99728 777 aaKnown RBP7.51□□□□□ -1.21
TRAV35-201ENST00000390462 TMEM120AQ9BXJ8 343 aa7.51□□□□□ -1.21
TRAV35-201ENST00000390462 TRIT1Q9H3H1 467 aaKnown RBP7.51□□□□□ -1.21
TRAV35-201ENST00000390462 MS4A5Q9H3V2 200 aa7.51□□□□□ -1.21
TRAV35-201ENST00000390462 PCDHGB2Q9Y5G2 931 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms