RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 SEC23AQ15436 765 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 STILQ15468 1287 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 TMEM177Q53S58 311 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 BTBD8Q5XKL5 378 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 VASNQ6EMK4 673 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 KIF18BQ86Y91 864 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 ZC3H7AQ8IWR0 971 aaKnown RBP3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 RBM12BQ8IXT5 1001 aaKnown RBP3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 ADGRG2Q8IZP9 1017 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 CXorf38Q8TB03 319 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 APPBP2Q92624 585 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 NINJ1Q92982 152 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 TEPSINQ96N21 525 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 CLIC6Q96NY7 704 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 SPATA25Q9BR10 227 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 YIPF4Q9BSR8 244 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 CD244Q9BZW8 370 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 CATSPERZQ9NTU4 200 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 MAGEC2Q9UBF1 373 aaPredicted RBP3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 CNOT11Q9UKZ1 510 aaKnown RBP3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 ATP23Q9Y6H3 246 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 SLC12A8A0AV02 714 aa3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 TLDC2A0PJX2 215 aa3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 TRAF5O00463 557 aa3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 PPP1R12AO14974 1030 aaPredicted RBP3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 ASMTLO95671 621 aa3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 MPIG6BO95866 241 aa3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 IL18BPO95998 194 aa3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 SRGAP2CP0DJJ0 459 aa3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 SDSP20132 328 aa3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 IL13P35225 146 aa3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 MLLT6P55198 1093 aaPredicted RBP3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 PFKPQ01813 784 aa3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 SMAD2Q15796 467 aaKnown RBP3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 TKFCQ3LXA3 575 aa3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 CREB3L3Q68CJ9 461 aa3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 CC2D1AQ6P1N0 951 aaPredicted RBP3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 CXXC5Q7LFL8 322 aaKnown RBP3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 PTRH1Q86Y79 214 aaKnown RBP3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 IGSF22Q8N9C0 903 aa3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 TXNDC5Q8NBS9 432 aaKnown RBP3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 AJUBAQ96IF1 538 aa3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 WNK4Q96J92 1243 aa3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 FEZ1Q99689 392 aa3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 KATNBL1Q9H079 304 aa3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 ZCCHC4Q9H5U6 513 aa3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 KCNH7Q9NS40 1196 aa3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 FANCLQ9NW38 375 aa3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 RBPJLQ9UBG7 517 aa3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 B4GALT6Q9UBX8 382 aa3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 PLAAQ9Y263 795 aa3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 COQ6Q9Y2Z9 468 aa3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 ASB1Q9Y576 335 aa3.47□□□□□ -1.85
RNU6-541P-201ENST00000384709 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.46□□□□□ -1.86
RNU6-541P-201ENST00000384709 MROH6A6NGR9 719 aa3.46□□□□□ -1.86
RNU6-541P-201ENST00000384709 GOLGA6L22H0YM25 854 aa3.46□□□□□ -1.86
RNU6-541P-201ENST00000384709 CBX4O00257 560 aa3.46□□□□□ -1.86
RNU6-541P-201ENST00000384709 GLRX3O76003 335 aaKnown RBP3.46□□□□□ -1.86
RNU6-541P-201ENST00000384709 APPP05067 770 aa3.46□□□□□ -1.86
RNU6-541P-201ENST00000384709 FNTBP49356 437 aa3.46□□□□□ -1.86
RNU6-541P-201ENST00000384709 DNM2P50570 870 aa3.46□□□□□ -1.86
RNU6-541P-201ENST00000384709 KIAA2012Q0VF49 1180 aa3.46□□□□□ -1.86
RNU6-541P-201ENST00000384709 SKIDA1Q1XH10 827 aa3.46□□□□□ -1.86
RNU6-541P-201ENST00000384709 TM4SF20Q53R12 229 aa3.46□□□□□ -1.86
RNU6-541P-201ENST00000384709 DALRD3Q5D0E6 543 aaKnown RBP3.46□□□□□ -1.86
RNU6-541P-201ENST00000384709 FSTL4Q6MZW2 842 aa3.46□□□□□ -1.86
RNU6-541P-201ENST00000384709 DDX53Q86TM3 631 aaKnown RBP3.46□□□□□ -1.86
RNU6-541P-201ENST00000384709 STK32CQ86UX6 486 aa3.46□□□□□ -1.86
RNU6-541P-201ENST00000384709 REXO1L1PQ8IX06 675 aa3.46□□□□□ -1.86
RNU6-541P-201ENST00000384709 KLHL36Q8N4N3 616 aa3.46□□□□□ -1.86
RNU6-541P-201ENST00000384709 SYT8Q8NBV8 401 aa3.46□□□□□ -1.86
RNU6-541P-201ENST00000384709 RBM15Q96T37 977 aaKnown RBP eCLIP3.46□□□□□ -1.86
RNU6-541P-201ENST00000384709 BOCQ9BWV1 1114 aa3.46□□□□□ -1.86
RNU6-541P-201ENST00000384709 MTFR1LQ9H019 292 aa3.46□□□□□ -1.86
RNU6-541P-201ENST00000384709 GALNT8Q9NY28 637 aa3.46□□□□□ -1.86
RNU6-541P-201ENST00000384709 ADAM29Q9UKF5 820 aa3.46□□□□□ -1.86
RNU6-541P-201ENST00000384709 TNPO3Q9Y5L0 923 aaKnown RBP3.46□□□□□ -1.86
RNU6-541P-201ENST00000384709 MRPL42Q9Y6G3 142 aaKnown RBP3.46□□□□□ -1.86
RNU6-541P-201ENST00000384709 RASSF10A6NK89 507 aa3.45□□□□□ -1.86
RNU6-541P-201ENST00000384709 DDX3XO00571 662 aaKnown RBP eCLIP3.45□□□□□ -1.86
RNU6-541P-201ENST00000384709 DVL2O14641 736 aa3.45□□□□□ -1.86
RNU6-541P-201ENST00000384709 PTGS1P23219 599 aa3.45□□□□□ -1.86
RNU6-541P-201ENST00000384709 ZNF460Q14592 562 aa3.45□□□□□ -1.86
RNU6-541P-201ENST00000384709 RGL3Q3MIN7 710 aa3.45□□□□□ -1.86
RNU6-541P-201ENST00000384709 CATSPEREQ5SY80 951 aa3.45□□□□□ -1.86
RNU6-541P-201ENST00000384709 NT5DC1Q5TFE4 455 aa3.45□□□□□ -1.86
RNU6-541P-201ENST00000384709 KANK2Q63ZY3 851 aa3.45□□□□□ -1.86
RNU6-541P-201ENST00000384709 CDCA2Q69YH5 1023 aaPredicted RBP3.45□□□□□ -1.86
RNU6-541P-201ENST00000384709 TMC5Q6UXY8 1006 aa3.45□□□□□ -1.86
RNU6-541P-201ENST00000384709 RTN4RL1Q86UN2 441 aaPredicted RBP3.45□□□□□ -1.86
RNU6-541P-201ENST00000384709 CISD2Q8N5K1 135 aaKnown RBP3.45□□□□□ -1.86
RNU6-541P-201ENST00000384709 CHST14Q8NCH0 376 aa3.45□□□□□ -1.86
RNU6-541P-201ENST00000384709 FEZF2Q8TBJ5 459 aa3.45□□□□□ -1.86
RNU6-541P-201ENST00000384709 DDX1Q92499 740 aaKnown RBP3.45□□□□□ -1.86
RNU6-541P-201ENST00000384709 FOXRED1Q96CU9 486 aaPredicted RBP3.45□□□□□ -1.86
RNU6-541P-201ENST00000384709 LCORQ96JN0 433 aaPredicted RBP3.45□□□□□ -1.86
RNU6-541P-201ENST00000384709 SSBP3Q9BWW4 388 aaPredicted RBP3.45□□□□□ -1.86
RNU6-541P-201ENST00000384709 BTBD2Q9BX70 525 aa3.45□□□□□ -1.86
RNU6-541P-201ENST00000384709 AMNQ9BXJ7 453 aa3.45□□□□□ -1.86
RNU6-541P-201ENST00000384709 RIC8BQ9NVN3 520 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms