RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 FSTL4Q6MZW2 842 aa7.2□□□□□ -1.26
RNU6-40P-201ENST00000384254 FLAD1Q8NFF5 587 aa7.2□□□□□ -1.26
RNU6-40P-201ENST00000384254 SHISA4Q96DD7 197 aa7.2□□□□□ -1.26
RNU6-40P-201ENST00000384254 DDX11Q96FC9 970 aa7.2□□□□□ -1.26
RNU6-40P-201ENST00000384254 MRFAP1Q9Y605 127 aa7.2□□□□□ -1.26
RNU6-40P-201ENST00000384254 SCO2A0A1W2PP80 73 aa7.19□□□□□ -1.26
RNU6-40P-201ENST00000384254 ABLIM1O14639 778 aa7.19□□□□□ -1.26
RNU6-40P-201ENST00000384254 DVL2O14641 736 aa7.19□□□□□ -1.26
RNU6-40P-201ENST00000384254 KDM1AO60341 852 aa7.19□□□□□ -1.26
RNU6-40P-201ENST00000384254 SNUPNO95149 360 aaKnown RBP7.19□□□□□ -1.26
RNU6-40P-201ENST00000384254 EFEMP2O95967 443 aa7.19□□□□□ -1.26
RNU6-40P-201ENST00000384254 MT-CO1P00395 513 aa7.19□□□□□ -1.26
RNU6-40P-201ENST00000384254 LTFP02788 710 aa7.19□□□□□ -1.26
RNU6-40P-201ENST00000384254 CT47B1P0C2W7 299 aaPredicted RBP7.19□□□□□ -1.26
RNU6-40P-201ENST00000384254 PTX3P26022 381 aaPredicted RBP7.19□□□□□ -1.26
RNU6-40P-201ENST00000384254 SDHAP31040 664 aa7.19□□□□□ -1.26
RNU6-40P-201ENST00000384254 PIN1Q13526 163 aaPredicted RBP7.19□□□□□ -1.26
RNU6-40P-201ENST00000384254 EPHA7Q15375 998 aa7.19□□□□□ -1.26
RNU6-40P-201ENST00000384254 NFE2Q16621 373 aaPredicted RBP7.19□□□□□ -1.26
RNU6-40P-201ENST00000384254 ZMYM1Q5SVZ6 1142 aa7.19□□□□□ -1.26
RNU6-40P-201ENST00000384254 PNMA8AQ86V59 439 aaPredicted RBP7.19□□□□□ -1.26
RNU6-40P-201ENST00000384254 WDR75Q8IWA0 830 aaKnown RBP7.19□□□□□ -1.26
RNU6-40P-201ENST00000384254 C7orf31Q8N865 590 aa7.19□□□□□ -1.26
RNU6-40P-201ENST00000384254 HIPK4Q8NE63 616 aa7.19□□□□□ -1.26
RNU6-40P-201ENST00000384254 TTLL11Q8NHH1 800 aa7.19□□□□□ -1.26
RNU6-40P-201ENST00000384254 E2F7Q96AV8 911 aa7.19□□□□□ -1.26
RNU6-40P-201ENST00000384254 USP36Q9P275 1121 aaKnown RBP7.19□□□□□ -1.26
RNU6-40P-201ENST00000384254 OR14I1A6ND48 311 aa7.18□□□□□ -1.26
RNU6-40P-201ENST00000384254 FAM90A27PA6NNH2 459 aa7.18□□□□□ -1.26
RNU6-40P-201ENST00000384254 GOLGA8AA7E2F4 631 aa7.18□□□□□ -1.26
RNU6-40P-201ENST00000384254 GOLGA8BA8MQT2 603 aa7.18□□□□□ -1.26
RNU6-40P-201ENST00000384254 C4BPAP04003 597 aaKnown RBP7.18□□□□□ -1.26
RNU6-40P-201ENST00000384254 IARSP41252 1262 aaKnown RBP7.18□□□□□ -1.26
RNU6-40P-201ENST00000384254 RAB27AP51159 221 aa7.18□□□□□ -1.26
RNU6-40P-201ENST00000384254 SCAND1P57086 179 aa7.18□□□□□ -1.26
RNU6-40P-201ENST00000384254 ERVK-21P61565 698 aa7.18□□□□□ -1.26
RNU6-40P-201ENST00000384254 HERVK_113P62684 666 aa7.18□□□□□ -1.26
RNU6-40P-201ENST00000384254 PAN2Q504Q3 1202 aaKnown RBP7.18□□□□□ -1.26
RNU6-40P-201ENST00000384254 PGM2L1Q6PCE3 622 aa7.18□□□□□ -1.26
RNU6-40P-201ENST00000384254 ZC3H14Q6PJT7 736 aaKnown RBP7.18□□□□□ -1.26
RNU6-40P-201ENST00000384254 RPTNQ6XPR3 784 aa7.18□□□□□ -1.26
RNU6-40P-201ENST00000384254 CLEC4DQ8WXI8 215 aa7.18□□□□□ -1.26
RNU6-40P-201ENST00000384254 ERCC4Q92889 916 aaPredicted RBP7.18□□□□□ -1.26
RNU6-40P-201ENST00000384254 HOOK2Q96ED9 719 aa7.18□□□□□ -1.26
RNU6-40P-201ENST00000384254 TSPAN17Q96FV3 270 aa7.18□□□□□ -1.26
RNU6-40P-201ENST00000384254 INTS4Q96HW7 963 aaKnown RBP7.18□□□□□ -1.26
RNU6-40P-201ENST00000384254 ZDHHC5Q9C0B5 715 aa7.18□□□□□ -1.26
RNU6-40P-201ENST00000384254 VTA1Q9NP79 307 aa7.18□□□□□ -1.26
RNU6-40P-201ENST00000384254 LUC7LQ9NQ29 371 aaKnown RBP7.18□□□□□ -1.26
RNU6-40P-201ENST00000384254 MKS1Q9NXB0 559 aa7.18□□□□□ -1.26
RNU6-40P-201ENST00000384254 ZIM2Q9NZV7 527 aa7.18□□□□□ -1.26
RNU6-40P-201ENST00000384254 TELO2Q9Y4R8 837 aa7.18□□□□□ -1.26
RNU6-40P-201ENST00000384254 AKAP10O43572 662 aa7.17□□□□□ -1.26
RNU6-40P-201ENST00000384254 SDHBP21912 280 aa7.17□□□□□ -1.26
RNU6-40P-201ENST00000384254 MAPKAPK2P49137 400 aa7.17□□□□□ -1.26
RNU6-40P-201ENST00000384254 PRR5P85299 388 aa7.17□□□□□ -1.26
RNU6-40P-201ENST00000384254 SEC23AQ15436 765 aa7.17□□□□□ -1.26
RNU6-40P-201ENST00000384254 TIGD7Q6NT04 549 aaPredicted RBP7.17□□□□□ -1.26
RNU6-40P-201ENST00000384254 RAVER1Q8IY67 606 aaKnown RBP7.17□□□□□ -1.26
RNU6-40P-201ENST00000384254 CHPFQ8IZ52 775 aa7.17□□□□□ -1.26
RNU6-40P-201ENST00000384254 ARRDC4Q8NCT1 418 aa7.17□□□□□ -1.26
RNU6-40P-201ENST00000384254 ALG3Q92685 438 aa7.17□□□□□ -1.26
RNU6-40P-201ENST00000384254 TOE1Q96GM8 510 aaKnown RBP7.17□□□□□ -1.26
RNU6-40P-201ENST00000384254 FUBP3Q96I24 572 aaKnown RBP eCLIP7.17□□□□□ -1.26
RNU6-40P-201ENST00000384254 ACAP3Q96P50 834 aa7.17□□□□□ -1.26
RNU6-40P-201ENST00000384254 ZMAT4Q9H898 229 aa7.17□□□□□ -1.26
RNU6-40P-201ENST00000384254 ARHGAP28Q9P2N2 729 aa7.17□□□□□ -1.26
RNU6-40P-201ENST00000384254 MSRAQ9UJ68 235 aa7.17□□□□□ -1.26
RNU6-40P-201ENST00000384254 TNKSO95271 1327 aa7.17□□□□□ -1.26
RNU6-40P-201ENST00000384254 UBA6A0AVT1 1052 aaPredicted RBP7.16□□□□□ -1.26
RNU6-40P-201ENST00000384254 BIN1O00499 593 aa7.16□□□□□ -1.26
RNU6-40P-201ENST00000384254 TSPAN6O43657 245 aa7.16□□□□□ -1.26
RNU6-40P-201ENST00000384254 ADAM23O75077 832 aa7.16□□□□□ -1.26
RNU6-40P-201ENST00000384254 ADAMTS4O75173 837 aa7.16□□□□□ -1.26
RNU6-40P-201ENST00000384254 FAHP16930 419 aa7.16□□□□□ -1.26
RNU6-40P-201ENST00000384254 CLUL1Q15846 466 aa7.16□□□□□ -1.26
RNU6-40P-201ENST00000384254 CATSPEREQ5SY80 951 aa7.16□□□□□ -1.26
RNU6-40P-201ENST00000384254 ESRP1Q6NXG1 681 aaKnown RBP7.16□□□□□ -1.26
RNU6-40P-201ENST00000384254 TTLL7Q6ZT98 887 aa7.16□□□□□ -1.26
RNU6-40P-201ENST00000384254 ESPNLQ6ZVH7 1005 aa7.16□□□□□ -1.26
RNU6-40P-201ENST00000384254 PHYKPLQ8IUZ5 450 aa7.16□□□□□ -1.26
RNU6-40P-201ENST00000384254 ABI1Q8IZP0 508 aa7.16□□□□□ -1.26
RNU6-40P-201ENST00000384254 RTF1Q92541 710 aaKnown RBP7.16□□□□□ -1.26
RNU6-40P-201ENST00000384254 FERMT2Q96AC1 680 aa7.16□□□□□ -1.26
RNU6-40P-201ENST00000384254 GBP4Q96PP9 640 aa7.16□□□□□ -1.26
RNU6-40P-201ENST00000384254 PDGFDQ9GZP0 370 aaPredicted RBP7.16□□□□□ -1.26
RNU6-40P-201ENST00000384254 NGRNQ9NPE2 291 aaKnown RBP7.16□□□□□ -1.26
RNU6-40P-201ENST00000384254 TOPORSQ9NS56 1045 aaPredicted RBP7.16□□□□□ -1.26
RNU6-40P-201ENST00000384254 DTLQ9NZJ0 730 aa7.16□□□□□ -1.26
RNU6-40P-201ENST00000384254 ZNF180Q9UJW8 692 aa7.16□□□□□ -1.26
RNU6-40P-201ENST00000384254 LUC7L2Q9Y383 392 aaKnown RBP7.16□□□□□ -1.26
RNU6-40P-201ENST00000384254 SCGB1D2O95969 90 aa7.15□□□□□ -1.26
RNU6-40P-201ENST00000384254 MMEP08473 750 aa7.15□□□□□ -1.26
RNU6-40P-201ENST00000384254 GP2P55259 537 aaKnown RBP7.15□□□□□ -1.26
RNU6-40P-201ENST00000384254 PLEKHN1Q494U1 663 aaPredicted RBP7.15□□□□□ -1.26
RNU6-40P-201ENST00000384254 ETV3LQ6ZN32 361 aa7.15□□□□□ -1.26
RNU6-40P-201ENST00000384254 ATG4DQ86TL0 474 aaPredicted RBP7.15□□□□□ -1.26
RNU6-40P-201ENST00000384254 ZC3H18Q86VM9 953 aaKnown RBP7.15□□□□□ -1.26
RNU6-40P-201ENST00000384254 FAM126BQ8IXS8 530 aa7.15□□□□□ -1.26
RNU6-40P-201ENST00000384254 CBARPQ8N350 705 aaPredicted RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms