RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 PTGDRQ13258 359 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 DOK7Q18PE1 504 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 C6orf118Q5T5N4 469 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 ENAHQ8N8S7 591 aaPredicted RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 FAM133AQ8N9E0 248 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 ZNF577Q9BSK1 485 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 APOBEC2Q9Y235 224 aaKnown RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 BCS1LQ9Y276 419 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 NFKBIAP25963 317 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 POU5F1BQ06416 359 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 ARL13BQ3SXY8 428 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 FSCBQ5H9T9 825 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 RFX8Q6ZV50 586 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 CENPUQ71F23 418 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 ZNF513Q8N8E2 541 aaPredicted RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 VPS39Q96JC1 886 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 FMO2Q99518 471 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 YIPF2Q9BWQ6 316 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 CDC23Q9UJX2 597 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 CAB39Q9Y376 341 aaPredicted RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 SCAF11Q99590 1463 aaKnown RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 POTEB3A0JP26 581 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 SEC24DO94855 1032 aaPredicted RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 BRD1O95696 1058 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 SLC9A1P19634 815 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 NDUFA8P51970 172 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 CACNB1Q02641 598 aaPredicted RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 TBL3Q12788 808 aaKnown RBP6.3□□□□□ -1.4
RFX3-204ENST00000382004 TNFAIP1Q13829 316 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 LRRC41Q15345 812 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 LVRNQ6Q4G3 990 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 POTEBQ6S5H4 581 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 G2E3Q7L622 706 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 RNF135Q8IUD6 432 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 CCHCR1Q8TD31 782 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 FSD1LQ9BXM9 530 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 FTOQ9C0B1 505 aaKnown RBP eCLIP6.3□□□□□ -1.4
RFX3-204ENST00000382004 LMBRD1Q9NUN5 540 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 GCNT4Q9P109 453 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 STK17AQ9UEE5 414 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 CLCA2Q9UQC9 943 aa6.3□□□□□ -1.4
RFX3-204ENST00000382004 ADCY3O60266 1144 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 VAMP4O75379 141 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 DCTN3O75935 186 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 GSNP06396 782 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 IMPDH2P12268 514 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 CEP78Q5JTW2 689 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 MIS18BP1Q6P0N0 1132 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 TTLL7Q6ZT98 887 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 PNMA1Q8ND90 353 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 RABGGTAQ92696 567 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 SH3KBP1Q96B97 665 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 ACCSQ96QU6 501 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 NACC1Q96RE7 527 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 SYNDIG1Q9H7V2 258 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 PRDM5Q9NQX1 630 aaPredicted RBP6.29□□□□□ -1.4
RFX3-204ENST00000382004 BTG4Q9NY30 223 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 NOP53Q9NZM5 478 aaKnown RBP6.29□□□□□ -1.4
RFX3-204ENST00000382004 MROH5Q6ZUA9 1318 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 E5RI56 91 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 COPEO14579 308 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 HSPA1AP0DMV8 641 aaKnown RBP6.29□□□□□ -1.4
RFX3-204ENST00000382004 HSPA1BP0DMV9 641 aaKnown RBP6.29□□□□□ -1.4
RFX3-204ENST00000382004 MYO1EQ12965 1108 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 ME3Q16798 604 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 DCAF4L1Q3SXM0 396 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 MCTP2Q6DN12 878 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 DSTYKQ6XUX3 929 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 PITPNM3Q9BZ71 974 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 ZBTB40Q9NUA8 1239 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 TMEM63CQ9P1W3 806 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 DIAPH2O60879 1101 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 NR1D1P20393 614 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 RBL2Q08999 1139 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 ALS2CLQ60I27 953 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 DCAF15Q66K64 600 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 ARHGAP27Q6ZUM4 889 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 ZNF507Q8TCN5 953 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 TBC1D22AQ8WUA7 517 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 CFAP69A5D8W1 941 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 TMEM232C9JQI7 657 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 GOLGA8MH3BSY2 632 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 SMAD1Q15797 465 aaKnown RBP6.29□□□□□ -1.4
RFX3-204ENST00000382004 DPY19L2Q6NUT2 758 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 WDR75Q8IWA0 830 aaKnown RBP6.29□□□□□ -1.4
RFX3-204ENST00000382004 SPICE1Q8N0Z3 855 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 STMN3Q9NZ72 180 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 CLIC4Q9Y696 253 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 A0A087WUV0 522 aaPredicted RBP6.29□□□□□ -1.4
RFX3-204ENST00000382004 SGSM2O43147 1006 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 KRT7P08729 469 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 ALDH1B1P30837 517 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 CEP55Q53EZ4 464 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 BTNL9Q6UXG8 535 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 KIAA0825Q8IV33 1275 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 EXOC8Q8IYI6 725 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 SMYD4Q8IYR2 804 aaPredicted RBP6.29□□□□□ -1.4
RFX3-204ENST00000382004 ICA1LQ8NDH6 482 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 SLC7A3Q8WY07 619 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 EGFL8Q99944 293 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms