RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 IFIH1Q9BYX4 1025 aaKnown RBP9.84□□□□□ -0.83
GPNMB-202ENST00000381990 MEFVO15553 781 aaPredicted RBP9.84□□□□□ -0.83
GPNMB-202ENST00000381990 TDP2O95551 362 aa9.84□□□□□ -0.83
GPNMB-202ENST00000381990 FXR2P51116 673 aaKnown RBP eCLIP9.84□□□□□ -0.83
GPNMB-202ENST00000381990 MAP3K10Q02779 954 aa9.84□□□□□ -0.83
GPNMB-202ENST00000381990 CCDC181Q5TID7 509 aa9.84□□□□□ -0.83
GPNMB-202ENST00000381990 KDM7AQ6ZMT4 941 aa9.84□□□□□ -0.83
GPNMB-202ENST00000381990 FBXO11Q86XK2 927 aa9.84□□□□□ -0.83
GPNMB-202ENST00000381990 OSBPL9Q96SU4 736 aa9.84□□□□□ -0.83
GPNMB-202ENST00000381990 GOPCQ9HD26 462 aa9.84□□□□□ -0.83
GPNMB-202ENST00000381990 PGAP2Q9UHJ9 254 aa9.84□□□□□ -0.83
GPNMB-202ENST00000381990 MAPK8IP1Q9UQF2 711 aa9.84□□□□□ -0.83
GPNMB-202ENST00000381990 BCS1LQ9Y276 419 aa9.84□□□□□ -0.83
GPNMB-202ENST00000381990 SLC37A4O43826 429 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 TECP42680 631 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 TXKP42681 527 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 PLCB4Q15147 1175 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 SKIDA1Q1XH10 827 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 TMEM266Q2M3C6 531 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 FKBP15Q5T1M5 1219 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 IFT20Q8IY31 132 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 MREGQ8N565 214 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 OTUD6BQ8N6M0 293 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 ACER1Q8TDN7 264 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.83□□□□□ -0.84
GPNMB-202ENST00000381990 RAB34Q9BZG1 259 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 KBTBD4Q9NVX7 518 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 DMGDHQ9UI17 866 aaKnown RBP9.83□□□□□ -0.84
GPNMB-202ENST00000381990 TFR2Q9UP52 801 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 KLRC4O43908 158 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 PLCG1P19174 1290 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 CCNE1P24864 410 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 MAP2K2P36507 400 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 CAP2P40123 477 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 ECE1P42892 770 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 PMS1P54277 932 aaKnown RBP9.83□□□□□ -0.84
GPNMB-202ENST00000381990 AP3B2Q13367 1082 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 PDIA5Q14554 519 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 COBLL1Q53SF7 1204 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 C8orf74Q6P047 294 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 ARHGAP27Q6ZUM4 889 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 CDAN1Q8IWY9 1227 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 CD302Q8IX05 232 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 RNF10Q8N5U6 811 aaKnown RBP9.83□□□□□ -0.84
GPNMB-202ENST00000381990 EPN3Q9H201 632 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 PCDHA13Q9Y5I0 950 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 DUSP10Q9Y6W6 482 aa9.83□□□□□ -0.84
GPNMB-202ENST00000381990 ABCB11O95342 1321 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 GOLGB1Q14789 3259 aaKnown RBP9.82□□□□□ -0.84
GPNMB-202ENST00000381990 RASSF10A6NK89 507 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 USP17L15C9J2P7 530 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 USP17L13C9JLJ4 530 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 USP17L11C9JVI0 530 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 USP17L18D6R9N7 530 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 USP17L22D6RA61 530 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 USP17L17D6RBQ6 530 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 USP17L19D6RCP7 530 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 USP17L20D6RJB6 530 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 STAT2P52630 851 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 USP17L24Q0WX57 530 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 TRAF1Q13077 416 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 DRP2Q13474 957 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 TNFAIP1Q13829 316 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 TTMPQ5BVD1 217 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 HAUS3Q68CZ6 603 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 KCNV1Q6PIU1 500 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 USP17L6PQ6QN14 398 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 MIGA2Q7L4E1 593 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 CCDC84Q86UT8 332 aaPredicted RBP9.82□□□□□ -0.84
GPNMB-202ENST00000381990 SPICE1Q8N0Z3 855 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 P2RX5Q93086 422 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 CALML4Q96GE6 196 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 LRWD1Q9UFC0 647 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 DDX25Q9UHL0 483 aaKnown RBP9.82□□□□□ -0.84
GPNMB-202ENST00000381990 PRR12Q9ULL5 1215 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 H0YHG0 523 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 MEIS2O14770 477 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 PJA2O43164 708 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 ASNSP08243 561 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 USP11P51784 963 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 CYP27A1Q02318 531 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 CFAP221Q4G0U5 840 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 TEX2Q8IWB9 1127 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 CNOT6LQ96LI5 555 aaKnown RBP9.82□□□□□ -0.84
GPNMB-202ENST00000381990 PCMTD1Q96MG8 357 aaPredicted RBP9.82□□□□□ -0.84
GPNMB-202ENST00000381990 PLIN2Q99541 437 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 MMTAG2Q9BU76 263 aaKnown RBP9.82□□□□□ -0.84
GPNMB-202ENST00000381990 NOC4LQ9BVI4 516 aaKnown RBP9.82□□□□□ -0.84
GPNMB-202ENST00000381990 ANO3Q9BYT9 981 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 CAPN6Q9Y6Q1 641 aa9.82□□□□□ -0.84
GPNMB-202ENST00000381990 ZNF263O14978 683 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 HOXA7P31268 230 aaPredicted RBP9.81□□□□□ -0.84
GPNMB-202ENST00000381990 FNTAP49354 379 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 SNAP25P60880 206 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 PAK2Q13177 524 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 RASA3Q14644 834 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 KIAA1755Q5JYT7 1200 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 FBXW10Q5XX13 1052 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 MOXD1Q6UVY6 613 aa9.81□□□□□ -0.84
GPNMB-202ENST00000381990 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms