RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 HAS3O00219 553 aa17.39■□□□□ 0.37
PDGFB-202ENST00000381551 BACH1O14867 736 aa17.39■□□□□ 0.37
PDGFB-202ENST00000381551 SPTLC2O15270 562 aa17.39■□□□□ 0.37
PDGFB-202ENST00000381551 PPP6R2O75170 966 aa17.39■□□□□ 0.37
PDGFB-202ENST00000381551 SLITRK3O94933 977 aa17.39■□□□□ 0.37
PDGFB-202ENST00000381551 F2P00734 622 aa17.39■□□□□ 0.37
PDGFB-202ENST00000381551 ZNF286BP0CG31 522 aa17.39■□□□□ 0.37
PDGFB-202ENST00000381551 SOX10P56693 466 aa17.39■□□□□ 0.37
PDGFB-202ENST00000381551 KRT85P78386 507 aa17.39■□□□□ 0.37
PDGFB-202ENST00000381551 TRIM50Q86XT4 487 aa17.39■□□□□ 0.37
PDGFB-202ENST00000381551 GLT1D1Q96MS3 346 aa17.39■□□□□ 0.37
PDGFB-202ENST00000381551 SENP6Q9GZR1 1112 aaPredicted RBP17.39■□□□□ 0.37
PDGFB-202ENST00000381551 AZI2Q9H6S1 392 aa17.39■□□□□ 0.37
PDGFB-202ENST00000381551 ZNF302Q9NR11 478 aa17.39■□□□□ 0.37
PDGFB-202ENST00000381551 GABBR1Q9UBS5 961 aa17.39■□□□□ 0.37
PDGFB-202ENST00000381551 FBXO2Q9UK22 296 aaPredicted RBP17.39■□□□□ 0.37
PDGFB-202ENST00000381551 GRIN2DO15399 1336 aa17.39■□□□□ 0.37
PDGFB-202ENST00000381551 EMSYQ7Z589 1322 aa17.39■□□□□ 0.37
PDGFB-202ENST00000381551 P4HBP07237 508 aaKnown RBP17.38■□□□□ 0.37
PDGFB-202ENST00000381551 ATP4AP20648 1035 aa17.38■□□□□ 0.37
PDGFB-202ENST00000381551 PSEN2P49810 448 aa17.38■□□□□ 0.37
PDGFB-202ENST00000381551 PSMC6P62333 389 aa17.38■□□□□ 0.37
PDGFB-202ENST00000381551 GRIN1Q05586 938 aa17.38■□□□□ 0.37
PDGFB-202ENST00000381551 FAM160B1Q5W0V3 765 aa17.38■□□□□ 0.37
PDGFB-202ENST00000381551 NECAB2Q7Z6G3 386 aa17.38■□□□□ 0.37
PDGFB-202ENST00000381551 TNPO1Q92973 898 aaKnown RBP17.38■□□□□ 0.37
PDGFB-202ENST00000381551 VTI1AQ96AJ9 217 aa17.38■□□□□ 0.37
PDGFB-202ENST00000381551 EIF2AK1Q9BQI3 630 aaKnown RBP17.38■□□□□ 0.37
PDGFB-202ENST00000381551 RAB34Q9BZG1 259 aa17.38■□□□□ 0.37
PDGFB-202ENST00000381551 RNPEPQ9H4A4 650 aa17.38■□□□□ 0.37
PDGFB-202ENST00000381551 C11orf49Q9H6J7 331 aa17.38■□□□□ 0.37
PDGFB-202ENST00000381551 ERAP1Q9NZ08 941 aa17.38■□□□□ 0.37
PDGFB-202ENST00000381551 RGL1Q9NZL6 768 aa17.38■□□□□ 0.37
PDGFB-202ENST00000381551 NCLP19338 710 aaKnown RBP17.37■□□□□ 0.37
PDGFB-202ENST00000381551 QARSP47897 775 aaKnown RBP17.37■□□□□ 0.37
PDGFB-202ENST00000381551 SLC26A2P50443 739 aa17.37■□□□□ 0.37
PDGFB-202ENST00000381551 MFSD10Q14728 455 aa17.37■□□□□ 0.37
PDGFB-202ENST00000381551 UGCGQ16739 394 aa17.37■□□□□ 0.37
PDGFB-202ENST00000381551 KIAA0753Q2KHM9 967 aa17.37■□□□□ 0.37
PDGFB-202ENST00000381551 PDXDC2PQ6P474 469 aa17.37■□□□□ 0.37
PDGFB-202ENST00000381551 KRI1Q8N9T8 703 aaKnown RBP17.37■□□□□ 0.37
PDGFB-202ENST00000381551 BANK1Q8NDB2 785 aa17.37■□□□□ 0.37
PDGFB-202ENST00000381551 KCNG4Q8TDN1 519 aa17.37■□□□□ 0.37
PDGFB-202ENST00000381551 AK8Q96MA6 479 aa17.37■□□□□ 0.37
PDGFB-202ENST00000381551 CLIC6Q96NY7 704 aa17.37■□□□□ 0.37
PDGFB-202ENST00000381551 SCAND2PQ9GZW5 306 aaPredicted RBP17.37■□□□□ 0.37
PDGFB-202ENST00000381551 STARD7Q9NQZ5 370 aa17.37■□□□□ 0.37
PDGFB-202ENST00000381551 ZNF215Q9UL58 517 aaPredicted RBP17.37■□□□□ 0.37
PDGFB-202ENST00000381551 PP2D1A8MPX8 630 aa17.36■□□□□ 0.37
PDGFB-202ENST00000381551 ZNF862O60290 1169 aa17.36■□□□□ 0.37
PDGFB-202ENST00000381551 STBD1O95210 358 aa17.36■□□□□ 0.37
PDGFB-202ENST00000381551 SPATA31C1P0DKV0 1188 aa17.36■□□□□ 0.37
PDGFB-202ENST00000381551 CDC25AP30304 524 aa17.36■□□□□ 0.37
PDGFB-202ENST00000381551 LONP1P36776 959 aaKnown RBP17.36■□□□□ 0.37
PDGFB-202ENST00000381551 PSMC5P62195 406 aa17.36■□□□□ 0.37
PDGFB-202ENST00000381551 ITGA7Q13683 1181 aa17.36■□□□□ 0.37
PDGFB-202ENST00000381551 PLCB4Q15147 1175 aa17.36■□□□□ 0.37
PDGFB-202ENST00000381551 NBPF20Q3BBV1 942 aa17.36■□□□□ 0.37
PDGFB-202ENST00000381551 CATSPER3Q86XQ3 398 aa17.36■□□□□ 0.37
PDGFB-202ENST00000381551 SLC43A3Q8NBI5 491 aa17.36■□□□□ 0.37
PDGFB-202ENST00000381551 ERMNQ8TAM6 284 aa17.36■□□□□ 0.37
PDGFB-202ENST00000381551 LEO1Q8WVC0 666 aaPredicted RBP17.36■□□□□ 0.37
PDGFB-202ENST00000381551 ATP6V0A1Q93050 837 aa17.36■□□□□ 0.37
PDGFB-202ENST00000381551 DYDC2Q96IM9 177 aa17.36■□□□□ 0.37
PDGFB-202ENST00000381551 SPATA32Q96LK8 384 aa17.36■□□□□ 0.37
PDGFB-202ENST00000381551 POLR3CQ9BUI4 534 aaPredicted RBP17.36■□□□□ 0.37
PDGFB-202ENST00000381551 KATNAL1Q9BW62 490 aa17.36■□□□□ 0.37
PDGFB-202ENST00000381551 CSRNP2Q9H175 543 aa17.36■□□□□ 0.37
PDGFB-202ENST00000381551 STK24Q9Y6E0 443 aa17.36■□□□□ 0.37
PDGFB-202ENST00000381551 MARK3P27448 753 aa17.35■□□□□ 0.37
PDGFB-202ENST00000381551 RPA1P27694 616 aa17.35■□□□□ 0.37
PDGFB-202ENST00000381551 CDK7P50613 346 aa17.35■□□□□ 0.37
PDGFB-202ENST00000381551 CHMP4BP1P59074 171 aa17.35■□□□□ 0.37
PDGFB-202ENST00000381551 CYP4A11Q02928 519 aa17.35■□□□□ 0.37
PDGFB-202ENST00000381551 MLLT1Q03111 559 aaPredicted RBP17.35■□□□□ 0.37
PDGFB-202ENST00000381551 CTTNQ14247 550 aaKnown RBP17.35■□□□□ 0.37
PDGFB-202ENST00000381551 AXDND1Q5T1B0 1012 aaPredicted RBP17.35■□□□□ 0.37
PDGFB-202ENST00000381551 SLC39A5Q6ZMH5 540 aa17.35■□□□□ 0.37
PDGFB-202ENST00000381551 TPH2Q8IWU9 490 aa17.35■□□□□ 0.37
PDGFB-202ENST00000381551 NEK9Q8TD19 979 aa17.35■□□□□ 0.37
PDGFB-202ENST00000381551 MMTAG2Q9BU76 263 aaKnown RBP17.35■□□□□ 0.37
PDGFB-202ENST00000381551 SEZ6LQ9BYH1 1024 aa17.35■□□□□ 0.37
PDGFB-202ENST00000381551 ZSWIM4Q9H7M6 989 aa17.35■□□□□ 0.37
PDGFB-202ENST00000381551 TUFT1Q9NNX1 390 aa17.35■□□□□ 0.37
PDGFB-202ENST00000381551 WRAP73Q9P2S5 460 aaPredicted RBP17.35■□□□□ 0.37
PDGFB-202ENST00000381551 PCDHA7Q9UN72 937 aa17.35■□□□□ 0.37
PDGFB-202ENST00000381551 IGSF9BQ9UPX0 1349 aa17.35■□□□□ 0.37
PDGFB-202ENST00000381551 TCHHQ07283 1943 aa17.35■□□□□ 0.37
PDGFB-202ENST00000381551 SCN10AQ9Y5Y9 1956 aa17.35■□□□□ 0.37
PDGFB-202ENST00000381551 POTEB3A0JP26 581 aa17.34■□□□□ 0.37
PDGFB-202ENST00000381551 ARVCFO00192 962 aa17.34■□□□□ 0.37
PDGFB-202ENST00000381551 DKC1O60832 514 aaKnown RBP eCLIP17.34■□□□□ 0.37
PDGFB-202ENST00000381551 CUTAO60888 179 aa17.34■□□□□ 0.37
PDGFB-202ENST00000381551 MED24O75448 989 aa17.34■□□□□ 0.37
PDGFB-202ENST00000381551 LYPLA2O95372 231 aa17.34■□□□□ 0.37
PDGFB-202ENST00000381551 ME1P48163 572 aa17.34■□□□□ 0.37
PDGFB-202ENST00000381551 C1orf53Q5VUE5 145 aa17.34■□□□□ 0.37
PDGFB-202ENST00000381551 KRT79Q5XKE5 535 aa17.34■□□□□ 0.37
PDGFB-202ENST00000381551 NFRKBQ6P4R8 1299 aa17.34■□□□□ 0.37
PDGFB-202ENST00000381551 POTEBQ6S5H4 581 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms