RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 MTRQ99707 1265 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 RNF146Q9NTX7 359 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 RSPH10B2B2RC85 870 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 HSF2BPO75031 334 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 RSPH10BP0C881 870 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 BCRP11274 1271 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 LRP6O75581 1613 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 GOLGA6L10A0A0M3HER8 536 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 A0A1W2PQC6 194 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 SHTN1A0MZ66 631 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 MSH4O15457 936 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 TRIM49P0CI25 452 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 TRIM49CP0CI26 452 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 PSMC6P62333 389 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 TUBB4BP68371 445 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 ZC2HC1CQ53FD0 456 aaPredicted RBP13.69□□□□□ -0.22
CDX2-201ENST00000381020 GLIS3Q8NEA6 775 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 SEMA6BQ9H3T3 888 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 RABEP2Q9H5N1 569 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 MYOZ2Q9NPC6 264 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 HYOU1Q9Y4L1 999 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 PKD1L3Q7Z443 1732 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 GSTTP1A0A1W2PQM5 241 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 PLEKP08567 350 aaPredicted RBP13.69□□□□□ -0.22
CDX2-201ENST00000381020 MYBP10242 640 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 CAPN2P17655 700 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 USP14P54578 494 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 ERVK-24P63145 666 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 DMP1Q13316 513 aaPredicted RBP13.69□□□□□ -0.22
CDX2-201ENST00000381020 MTERF2Q49AM1 385 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 PNMA5Q96PV4 448 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 MPHOSPH6Q99547 160 aaKnown RBP13.69□□□□□ -0.22
CDX2-201ENST00000381020 MYH2Q9UKX2 1941 aa13.68□□□□□ -0.22
CDX2-201ENST00000381020 TNNC1P63316 161 aa13.68□□□□□ -0.22
CDX2-201ENST00000381020 C2orf54Q08AI8 447 aa13.68□□□□□ -0.22
CDX2-201ENST00000381020 ZNF710Q8N1W2 664 aa13.68□□□□□ -0.22
CDX2-201ENST00000381020 KIAA0895Q8NCT3 520 aa13.68□□□□□ -0.22
CDX2-201ENST00000381020 EHD4Q9H223 541 aa13.68□□□□□ -0.22
CDX2-201ENST00000381020 RPAP3Q9H6T3 665 aaPredicted RBP13.68□□□□□ -0.22
CDX2-201ENST00000381020 ACTN1P12814 892 aa13.68□□□□□ -0.22
CDX2-201ENST00000381020 LONRF2Q1L5Z9 754 aa13.68□□□□□ -0.22
CDX2-201ENST00000381020 WDR44Q5JSH3 913 aa13.68□□□□□ -0.22
CDX2-201ENST00000381020 DCPSQ96C86 337 aaKnown RBP13.68□□□□□ -0.22
CDX2-201ENST00000381020 POLGP54098 1239 aaPredicted RBP13.68□□□□□ -0.22
CDX2-201ENST00000381020 MYL7Q01449 175 aa13.68□□□□□ -0.22
CDX2-201ENST00000381020 PDGFDQ9GZP0 370 aaPredicted RBP13.68□□□□□ -0.22
CDX2-201ENST00000381020 DEFB129Q9H1M3 183 aa13.68□□□□□ -0.22
CDX2-201ENST00000381020 AZI2Q9H6S1 392 aa13.68□□□□□ -0.22
CDX2-201ENST00000381020 ANKFY1Q9P2R3 1169 aa13.68□□□□□ -0.22
CDX2-201ENST00000381020 CYP11B2P19099 503 aa13.67□□□□□ -0.22
CDX2-201ENST00000381020 CETN2P41208 172 aa13.67□□□□□ -0.22
CDX2-201ENST00000381020 GMPSP49915 693 aaPredicted RBP13.67□□□□□ -0.22
CDX2-201ENST00000381020 DEPTORQ8TB45 409 aa13.67□□□□□ -0.22
CDX2-201ENST00000381020 TSPYL1Q9H0U9 437 aa13.67□□□□□ -0.22
CDX2-201ENST00000381020 BLOC1S4Q9NUP1 217 aa13.67□□□□□ -0.22
CDX2-201ENST00000381020 FZD1Q9UP38 647 aa13.67□□□□□ -0.22
CDX2-201ENST00000381020 SMIM23A6NLE4 172 aa13.67□□□□□ -0.22
CDX2-201ENST00000381020 DKC1O60832 514 aaKnown RBP eCLIP13.67□□□□□ -0.22
CDX2-201ENST00000381020 TUBBP07437 444 aa13.67□□□□□ -0.22
CDX2-201ENST00000381020 KCNJ6P48051 423 aa13.67□□□□□ -0.22
CDX2-201ENST00000381020 LIG4P49917 911 aa13.67□□□□□ -0.22
CDX2-201ENST00000381020 GUCY2FP51841 1108 aa13.67□□□□□ -0.22
CDX2-201ENST00000381020 SLC35G1Q2M3R5 365 aa13.67□□□□□ -0.22
CDX2-201ENST00000381020 AKT1S1Q96B36 256 aa13.67□□□□□ -0.22
CDX2-201ENST00000381020 SLC16A4O15374 487 aa13.67□□□□□ -0.22
CDX2-201ENST00000381020 NCK2O43639 380 aa13.67□□□□□ -0.22
CDX2-201ENST00000381020 TCP1P17987 556 aaKnown RBP13.67□□□□□ -0.22
CDX2-201ENST00000381020 SLC7A5Q01650 507 aa13.67□□□□□ -0.22
CDX2-201ENST00000381020 BRD3Q15059 726 aa13.67□□□□□ -0.22
CDX2-201ENST00000381020 ALKBH5Q6P6C2 394 aaKnown RBP13.67□□□□□ -0.22
CDX2-201ENST00000381020 CCDC50Q8IVM0 306 aa13.67□□□□□ -0.22
CDX2-201ENST00000381020 LRRN4CLQ8ND94 238 aa13.67□□□□□ -0.22
CDX2-201ENST00000381020 ZKSCAN4Q969J2 545 aaPredicted RBP13.67□□□□□ -0.22
CDX2-201ENST00000381020 IDI2Q9BXS1 227 aa13.67□□□□□ -0.22
CDX2-201ENST00000381020 KMT5AQ9NQR1 393 aa13.67□□□□□ -0.22
CDX2-201ENST00000381020 A0A0U1RQJ8 604 aa13.66□□□□□ -0.22
CDX2-201ENST00000381020 ATP1A1P05023 1023 aaKnown RBP13.66□□□□□ -0.22
CDX2-201ENST00000381020 RPA1P27694 616 aa13.66□□□□□ -0.22
CDX2-201ENST00000381020 INPP5BP32019 993 aa13.66□□□□□ -0.22
CDX2-201ENST00000381020 GCLMP48507 274 aa13.66□□□□□ -0.22
CDX2-201ENST00000381020 BAATQ14032 418 aaPredicted RBP13.66□□□□□ -0.22
CDX2-201ENST00000381020 ANGEL2Q5VTE6 544 aaKnown RBP13.66□□□□□ -0.22
CDX2-201ENST00000381020 PAXIP1Q6ZW49 1069 aaPredicted RBP13.66□□□□□ -0.22
CDX2-201ENST00000381020 DHX37Q8IY37 1157 aaKnown RBP13.66□□□□□ -0.22
CDX2-201ENST00000381020 METTL13Q8N6R0 699 aa13.66□□□□□ -0.22
CDX2-201ENST00000381020 ATRIPQ8WXE1 791 aa13.66□□□□□ -0.22
CDX2-201ENST00000381020 SYNCQ9H7C4 482 aa13.66□□□□□ -0.22
CDX2-201ENST00000381020 TLDC2A0PJX2 215 aa13.66□□□□□ -0.22
CDX2-201ENST00000381020 FAM86B1E9PN63 330 aa13.66□□□□□ -0.22
CDX2-201ENST00000381020 EYA4O95677 639 aa13.66□□□□□ -0.22
CDX2-201ENST00000381020 SERPING1P05155 500 aa13.66□□□□□ -0.22
CDX2-201ENST00000381020 FAM86B2P0C5J1 330 aa13.66□□□□□ -0.22
CDX2-201ENST00000381020 CAP2P40123 477 aa13.66□□□□□ -0.22
CDX2-201ENST00000381020 GABPAQ06546 454 aa13.66□□□□□ -0.22
CDX2-201ENST00000381020 MKRN3Q13064 507 aaKnown RBP13.66□□□□□ -0.22
CDX2-201ENST00000381020 SUPT20HL1Q3ZLR7 823 aa13.66□□□□□ -0.22
CDX2-201ENST00000381020 CCDC25Q86WR0 208 aa13.66□□□□□ -0.22
CDX2-201ENST00000381020 C4orf32Q8N8J7 132 aa13.66□□□□□ -0.22
CDX2-201ENST00000381020 GOLGA5Q8TBA6 731 aa13.66□□□□□ -0.22
CDX2-201ENST00000381020 PDE11AQ9HCR9 933 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms