RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 ANKRD7Q92527 254 aa21.29■■□□□ 1
GMDS-201ENST00000380805 MAF1Q9H063 256 aa21.29■■□□□ 1
GMDS-201ENST00000380805 TAF1DQ9H5J8 278 aaPredicted RBP21.29■■□□□ 1
GMDS-201ENST00000380805 JADE2Q9NQC1 790 aa21.29■■□□□ 1
GMDS-201ENST00000380805 ADARB2Q9NS39 739 aaKnown RBP21.29■■□□□ 1
GMDS-201ENST00000380805 SCN4AP35499 1836 aa21.29■■□□□ 1
GMDS-201ENST00000380805 PTPRFP10586 1907 aa21.28■■□□□ 1
GMDS-201ENST00000380805 DHX15O43143 795 aaKnown RBP21.28■■□□□ 1
GMDS-201ENST00000380805 TRIM21P19474 475 aaKnown RBP21.28■■□□□ 1
GMDS-201ENST00000380805 CTTNQ14247 550 aaKnown RBP21.28■■□□□ 1
GMDS-201ENST00000380805 CPXCR1Q8N123 301 aa21.28■■□□□ 1
GMDS-201ENST00000380805 ZNF710Q8N1W2 664 aa21.28■■□□□ 1
GMDS-201ENST00000380805 ZKSCAN4Q969J2 545 aaPredicted RBP21.28■■□□□ 1
GMDS-201ENST00000380805 NACC1Q96RE7 527 aa21.28■■□□□ 1
GMDS-201ENST00000380805 EDEM3Q9BZQ6 932 aa21.28■■□□□ 1
GMDS-201ENST00000380805 KCNH7Q9NS40 1196 aa21.28■■□□□ 1
GMDS-201ENST00000380805 GGA3Q9NZ52 723 aa21.28■■□□□ 1
GMDS-201ENST00000380805 TBC1D7Q9P0N9 293 aa21.28■■□□□ 1
GMDS-201ENST00000380805 TRAF5O00463 557 aa21.27■■□□□ 1
GMDS-201ENST00000380805 SLU7O95391 586 aaKnown RBP21.27■■□□□ 1
GMDS-201ENST00000380805 CASP5P51878 434 aa21.27■■□□□ 1
GMDS-201ENST00000380805 MRPS9P82933 396 aaKnown RBP21.27■■□□□ 1
GMDS-201ENST00000380805 RAD51AP2Q09MP3 1159 aa21.27■■□□□ 1
GMDS-201ENST00000380805 TKFCQ3LXA3 575 aa21.27■■□□□ 1
GMDS-201ENST00000380805 MTERF4Q7Z6M4 381 aaKnown RBP21.27■■□□□ 1
GMDS-201ENST00000380805 TRIM59Q8IWR1 403 aa21.27■■□□□ 1
GMDS-201ENST00000380805 ERO1AQ96HE7 468 aa21.27■■□□□ 1
GMDS-201ENST00000380805 POLR2AP24928 1970 aaKnown RBP21.27■■□□□ 1
GMDS-201ENST00000380805 PDXKO00764 312 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 ATP2A1O14983 1001 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 YY1P25490 414 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 HOXD13P35453 343 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 KLK7P49862 253 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 ZNF131P52739 623 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 RPS6P62753 249 aaKnown RBP21.26■□□□□ 0.99
GMDS-201ENST00000380805 KNOP1Q1ED39 458 aaKnown RBP21.26■□□□□ 0.99
GMDS-201ENST00000380805 ZNF662Q6ZS27 426 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 TPH2Q8IWU9 490 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 TSC1Q92574 1164 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 ATG4CQ96DT6 458 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 CHP1Q99653 195 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 AGO4Q9HCK5 861 aaKnown RBP21.26■□□□□ 0.99
GMDS-201ENST00000380805 AGPAT5Q9NUQ2 364 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 SEL1LQ9UBV2 794 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 MYPNQ86TC9 1320 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 MYH11P35749 1972 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 OTOFQ9HC10 1997 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 IQCA1LA6NCM1 817 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 EIF3DO15371 548 aaKnown RBP eCLIP21.26■□□□□ 0.99
GMDS-201ENST00000380805 CHMP2AO43633 222 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 TBCAO75347 108 aaKnown RBP21.26■□□□□ 0.99
GMDS-201ENST00000380805 NDUFA10O95299 355 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 NCBP1Q09161 790 aaKnown RBP21.26■□□□□ 0.99
GMDS-201ENST00000380805 PGM5Q15124 567 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 TSR1Q2NL82 804 aaKnown RBP21.26■□□□□ 0.99
GMDS-201ENST00000380805 XRRA1Q6P2D8 792 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 SLC30A10Q6XR72 485 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 NELFCDQ8IXH7 590 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 TRERF1Q96PN7 1200 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 WRAP73Q9P2S5 460 aaPredicted RBP21.26■□□□□ 0.99
GMDS-201ENST00000380805 ZNF215Q9UL58 517 aaPredicted RBP21.26■□□□□ 0.99
GMDS-201ENST00000380805 FAM184BQ9ULE4 1060 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 ODF2LQ9ULJ1 636 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 EPN1Q9Y6I3 576 aaPredicted RBP21.26■□□□□ 0.99
GMDS-201ENST00000380805 A0A0G2JMZ2 1700 aa21.26■□□□□ 0.99
GMDS-201ENST00000380805 UBE4BO95155 1302 aa21.25■□□□□ 0.99
GMDS-201ENST00000380805 POTEJP0CG39 1038 aa21.25■□□□□ 0.99
GMDS-201ENST00000380805 DSG3P32926 999 aa21.25■□□□□ 0.99
GMDS-201ENST00000380805 GNG11P61952 73 aa21.25■□□□□ 0.99
GMDS-201ENST00000380805 NFIL3Q16649 462 aa21.25■□□□□ 0.99
GMDS-201ENST00000380805 SUPT20HL1Q3ZLR7 823 aa21.25■□□□□ 0.99
GMDS-201ENST00000380805 CCDC170Q8IYT3 715 aa21.25■□□□□ 0.99
GMDS-201ENST00000380805 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.25■□□□□ 0.997e-6■■■□□ 14.8
GMDS-201ENST00000380805 PIGOQ8TEQ8 1089 aa21.25■□□□□ 0.99
GMDS-201ENST00000380805 WDR24Q96S15 920 aa21.25■□□□□ 0.99
GMDS-201ENST00000380805 MAP7D2Q96T17 732 aa21.25■□□□□ 0.99
GMDS-201ENST00000380805 RSPH10B2B2RC85 870 aa21.24■□□□□ 0.99
GMDS-201ENST00000380805 LYPLA2O95372 231 aa21.24■□□□□ 0.99
GMDS-201ENST00000380805 RSPH10BP0C881 870 aa21.24■□□□□ 0.99
GMDS-201ENST00000380805 GUCY2CP25092 1073 aa21.24■□□□□ 0.99
GMDS-201ENST00000380805 ITGB3BPQ13352 177 aaPredicted RBP21.24■□□□□ 0.99
GMDS-201ENST00000380805 RNF207Q6ZRF8 634 aa21.24■□□□□ 0.99
GMDS-201ENST00000380805 ACRBPQ8NEB7 543 aa21.24■□□□□ 0.99
GMDS-201ENST00000380805 ZNF397Q8NF99 534 aaPredicted RBP21.24■□□□□ 0.99
GMDS-201ENST00000380805 TAAR1Q96RJ0 339 aa21.24■□□□□ 0.99
GMDS-201ENST00000380805 PDCD2LQ9BRP1 358 aa21.24■□□□□ 0.99
GMDS-201ENST00000380805 LXNQ9BS40 222 aa21.24■□□□□ 0.99
GMDS-201ENST00000380805 PXMP2Q9NR77 195 aa21.24■□□□□ 0.99
GMDS-201ENST00000380805 TBC1D22BQ9NU19 505 aa21.24■□□□□ 0.99
GMDS-201ENST00000380805 TYW1Q9NV66 732 aaKnown RBP21.24■□□□□ 0.99
GMDS-201ENST00000380805 MYO1AQ9UBC5 1043 aa21.24■□□□□ 0.99
GMDS-201ENST00000380805 PLAGL2Q9UPG8 496 aa21.24■□□□□ 0.99
GMDS-201ENST00000380805 CTDP1Q9Y5B0 961 aaPredicted RBP21.24■□□□□ 0.99
GMDS-201ENST00000380805 ZHX2Q9Y6X8 837 aa21.24■□□□□ 0.99
GMDS-201ENST00000380805 CETN3O15182 167 aa21.24■□□□□ 0.99
GMDS-201ENST00000380805 ARHGAP25P42331 645 aa21.24■□□□□ 0.99
GMDS-201ENST00000380805 CCDC40Q4G0X9 1142 aa21.24■□□□□ 0.99
GMDS-201ENST00000380805 EAPPQ56P03 285 aaPredicted RBP21.24■□□□□ 0.99
GMDS-201ENST00000380805 SH3D19Q5HYK7 790 aa21.24■□□□□ 0.99
GMDS-201ENST00000380805 WNK4Q96J92 1243 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms