RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 PP2D1A8MPX8 630 aa14.24□□□□□ -0.13
SMN1-202ENST00000380707 BACH1O14867 736 aa14.24□□□□□ -0.13
SMN1-202ENST00000380707 KPNA6O60684 536 aa14.24□□□□□ -0.13
SMN1-202ENST00000380707 CDC25AP30304 524 aa14.24□□□□□ -0.13
SMN1-202ENST00000380707 SOX10P56693 466 aa14.24□□□□□ -0.13
SMN1-202ENST00000380707 EPHA7Q15375 998 aa14.24□□□□□ -0.13
SMN1-202ENST00000380707 UGCGQ16739 394 aa14.24□□□□□ -0.13
SMN1-202ENST00000380707 LEO1Q8WVC0 666 aaPredicted RBP14.24□□□□□ -0.13
SMN1-202ENST00000380707 GLG1Q92896 1179 aa14.24□□□□□ -0.13
SMN1-202ENST00000380707 CLIC6Q96NY7 704 aa14.24□□□□□ -0.13
SMN1-202ENST00000380707 MTG1Q9BT17 334 aaPredicted RBP14.24□□□□□ -0.13
SMN1-202ENST00000380707 RGL1Q9NZL6 768 aa14.24□□□□□ -0.13
SMN1-202ENST00000380707 GABBR1Q9UBS5 961 aa14.24□□□□□ -0.13
SMN1-202ENST00000380707 LRWD1Q9UFC0 647 aa14.24□□□□□ -0.13
SMN1-202ENST00000380707 SRPRBQ9Y5M8 271 aaKnown RBP14.24□□□□□ -0.13
SMN1-202ENST00000380707 EMSYQ7Z589 1322 aa14.23□□□□□ -0.13
SMN1-202ENST00000380707 H3BRB1 525 aa14.23□□□□□ -0.13
SMN1-202ENST00000380707 PPP6R2O75170 966 aa14.23□□□□□ -0.13
SMN1-202ENST00000380707 SLITRK3O94933 977 aa14.23□□□□□ -0.13
SMN1-202ENST00000380707 F2P00734 622 aa14.23□□□□□ -0.13
SMN1-202ENST00000380707 CAPN2P17655 700 aa14.23□□□□□ -0.13
SMN1-202ENST00000380707 STAT5BP51692 787 aa14.23□□□□□ -0.13
SMN1-202ENST00000380707 PSMC6P62333 389 aa14.23□□□□□ -0.13
SMN1-202ENST00000380707 PLPPR4Q7Z2D5 763 aa14.23□□□□□ -0.13
SMN1-202ENST00000380707 KRI1Q8N9T8 703 aaKnown RBP14.23□□□□□ -0.13
SMN1-202ENST00000380707 BANK1Q8NDB2 785 aa14.23□□□□□ -0.13
SMN1-202ENST00000380707 KCNG4Q8TDN1 519 aa14.23□□□□□ -0.13
SMN1-202ENST00000380707 AFAP1L1Q8TED9 768 aa14.23□□□□□ -0.13
SMN1-202ENST00000380707 PPP1R13LQ8WUF5 828 aa14.23□□□□□ -0.13
SMN1-202ENST00000380707 PAWRQ96IZ0 340 aaKnown RBP14.23□□□□□ -0.13
SMN1-202ENST00000380707 HSD17B14Q9BPX1 270 aa14.23□□□□□ -0.13
SMN1-202ENST00000380707 EIF2AK1Q9BQI3 630 aaKnown RBP14.23□□□□□ -0.13
SMN1-202ENST00000380707 SENP6Q9GZR1 1112 aaPredicted RBP14.23□□□□□ -0.13
SMN1-202ENST00000380707 CSRNP2Q9H175 543 aa14.23□□□□□ -0.13
SMN1-202ENST00000380707 SMARCAD1Q9H4L7 1026 aa14.23□□□□□ -0.13
SMN1-202ENST00000380707 TUT1Q9H6E5 874 aaKnown RBP14.23□□□□□ -0.13
SMN1-202ENST00000380707 AZI2Q9H6S1 392 aa14.23□□□□□ -0.13
SMN1-202ENST00000380707 GDPD2Q9HCC8 539 aa14.23□□□□□ -0.13
SMN1-202ENST00000380707 ZNF302Q9NR11 478 aa14.23□□□□□ -0.13
SMN1-202ENST00000380707 MAFBQ9Y5Q3 323 aaPredicted RBP14.23□□□□□ -0.13
SMN1-202ENST00000380707 GRIN2DO15399 1336 aa14.22□□□□□ -0.13
SMN1-202ENST00000380707 ZNF862O60290 1169 aa14.22□□□□□ -0.13
SMN1-202ENST00000380707 P4HBP07237 508 aaKnown RBP14.22□□□□□ -0.13
SMN1-202ENST00000380707 COL6A1P12109 1028 aa14.22□□□□□ -0.13
SMN1-202ENST00000380707 ATP4AP20648 1035 aa14.22□□□□□ -0.13
SMN1-202ENST00000380707 MARK3P27448 753 aa14.22□□□□□ -0.13
SMN1-202ENST00000380707 LONP1P36776 959 aaKnown RBP14.22□□□□□ -0.13
SMN1-202ENST00000380707 CHMP4BP1P59074 171 aa14.22□□□□□ -0.13
SMN1-202ENST00000380707 CYP4A11Q02928 519 aa14.22□□□□□ -0.13
SMN1-202ENST00000380707 KIAA0753Q2KHM9 967 aa14.22□□□□□ -0.13
SMN1-202ENST00000380707 SPECC1Q5M775 1068 aa14.22□□□□□ -0.13
SMN1-202ENST00000380707 FAM160B1Q5W0V3 765 aa14.22□□□□□ -0.13
SMN1-202ENST00000380707 PDXDC2PQ6P474 469 aa14.22□□□□□ -0.13
SMN1-202ENST00000380707 VTI1AQ96AJ9 217 aa14.22□□□□□ -0.13
SMN1-202ENST00000380707 DYDC2Q96IM9 177 aa14.22□□□□□ -0.13
SMN1-202ENST00000380707 SPATA32Q96LK8 384 aa14.22□□□□□ -0.13
SMN1-202ENST00000380707 GLT1D1Q96MS3 346 aa14.22□□□□□ -0.13
SMN1-202ENST00000380707 RAB34Q9BZG1 259 aa14.22□□□□□ -0.13
SMN1-202ENST00000380707 SCAND2PQ9GZW5 306 aaPredicted RBP14.22□□□□□ -0.13
SMN1-202ENST00000380707 RNPEPQ9H4A4 650 aa14.22□□□□□ -0.13
SMN1-202ENST00000380707 WRAP73Q9P2S5 460 aaPredicted RBP14.22□□□□□ -0.13
SMN1-202ENST00000380707 TCHHQ07283 1943 aa14.22□□□□□ -0.13
SMN1-202ENST00000380707 IGSF9BQ9UPX0 1349 aa14.22□□□□□ -0.13
SMN1-202ENST00000380707 HAS3O00219 553 aa14.21□□□□□ -0.13
SMN1-202ENST00000380707 MED24O75448 989 aa14.21□□□□□ -0.13
SMN1-202ENST00000380707 CABYRO75952 493 aa14.21□□□□□ -0.13
SMN1-202ENST00000380707 SPATA31C1P0DKV0 1188 aa14.21□□□□□ -0.13
SMN1-202ENST00000380707 ME1P48163 572 aa14.21□□□□□ -0.13
SMN1-202ENST00000380707 PSEN2P49810 448 aa14.21□□□□□ -0.13
SMN1-202ENST00000380707 CTTNQ14247 550 aaKnown RBP14.21□□□□□ -0.13
SMN1-202ENST00000380707 MFSD10Q14728 455 aa14.21□□□□□ -0.13
SMN1-202ENST00000380707 NBPF20Q3BBV1 942 aa14.21□□□□□ -0.13
SMN1-202ENST00000380707 AXDND1Q5T1B0 1012 aaPredicted RBP14.21□□□□□ -0.13
SMN1-202ENST00000380707 TRMT1LQ7Z2T5 733 aaKnown RBP14.21□□□□□ -0.13
SMN1-202ENST00000380707 UBE2Q1Q7Z7E8 422 aa14.21□□□□□ -0.13
SMN1-202ENST00000380707 CATSPER3Q86XQ3 398 aa14.21□□□□□ -0.13
SMN1-202ENST00000380707 TPH2Q8IWU9 490 aa14.21□□□□□ -0.13
SMN1-202ENST00000380707 LXNQ9BS40 222 aa14.21□□□□□ -0.13
SMN1-202ENST00000380707 MMTAG2Q9BU76 263 aaKnown RBP14.21□□□□□ -0.13
SMN1-202ENST00000380707 ERAP1Q9NZ08 941 aa14.21□□□□□ -0.13
SMN1-202ENST00000380707 ZNF215Q9UL58 517 aaPredicted RBP14.21□□□□□ -0.13
SMN1-202ENST00000380707 PCDHA7Q9UN72 937 aa14.21□□□□□ -0.13
SMN1-202ENST00000380707 QARSP47897 775 aaKnown RBP14.2□□□□□ -0.14
SMN1-202ENST00000380707 PSMC5P62195 406 aa14.2□□□□□ -0.14
SMN1-202ENST00000380707 PLCB4Q15147 1175 aa14.2□□□□□ -0.14
SMN1-202ENST00000380707 ECM1Q16610 540 aa14.2□□□□□ -0.14
SMN1-202ENST00000380707 USP49Q70CQ1 688 aa14.2□□□□□ -0.14
SMN1-202ENST00000380707 ERMNQ8TAM6 284 aa14.2□□□□□ -0.14
SMN1-202ENST00000380707 ATP6V0A1Q93050 837 aa14.2□□□□□ -0.14
SMN1-202ENST00000380707 EPSTI1Q96J88 318 aa14.2□□□□□ -0.14
SMN1-202ENST00000380707 AK8Q96MA6 479 aa14.2□□□□□ -0.14
SMN1-202ENST00000380707 POLR3CQ9BUI4 534 aaPredicted RBP14.2□□□□□ -0.14
SMN1-202ENST00000380707 KATNAL1Q9BW62 490 aa14.2□□□□□ -0.14
SMN1-202ENST00000380707 C11orf49Q9H6J7 331 aa14.2□□□□□ -0.14
SMN1-202ENST00000380707 STARD7Q9NQZ5 370 aa14.2□□□□□ -0.14
SMN1-202ENST00000380707 SCN10AQ9Y5Y9 1956 aa14.2□□□□□ -0.14
SMN1-202ENST00000380707 ZBTB39O15060 712 aa14.2□□□□□ -0.14
SMN1-202ENST00000380707 STBD1O95210 358 aa14.2□□□□□ -0.14
SMN1-202ENST00000380707 RPA1P27694 616 aa14.2□□□□□ -0.14
SMN1-202ENST00000380707 CCT6AP40227 531 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms