RNA–Protein interactions for RNA: ENST00000380692.6

MSL3-205, Transcript of MSL complex subunit 3, human

TSL 3

Gene MSL3, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSL3-205	ENST00000380692	C1orf53	Q5VUE5	145 aa		10.3	□□□□□ -0.76
MSL3-205	ENST00000380692	FAM160B1	Q5W0V3	765 aa		10.3	□□□□□ -0.76
MSL3-205	ENST00000380692	FAM173B	Q6P4H8	233 aa		10.3	□□□□□ -0.76
MSL3-205	ENST00000380692	PLPPR4	Q7Z2D5	763 aa		10.3	□□□□□ -0.76
MSL3-205	ENST00000380692	TRIM50	Q86XT4	487 aa		10.3	□□□□□ -0.76
MSL3-205	ENST00000380692	C7orf31	Q8N865	590 aa		10.3	□□□□□ -0.76
MSL3-205	ENST00000380692	C4orf32	Q8N8J7	132 aa		10.3	□□□□□ -0.76
MSL3-205	ENST00000380692	SEZ6L	Q9BYH1	1024 aa		10.3	□□□□□ -0.76
MSL3-205	ENST00000380692	ZNF302	Q9NR11	478 aa		10.3	□□□□□ -0.76
MSL3-205	ENST00000380692	ERAP1	Q9NZ08	941 aa		10.3	□□□□□ -0.76
MSL3-205	ENST00000380692	ZNF215	Q9UL58	517 aa	Predicted RBP	10.3	□□□□□ -0.76
MSL3-205	ENST00000380692	TRPC6	Q9Y210	931 aa		10.3	□□□□□ -0.76
MSL3-205	ENST00000380692	RBM19	Q9Y4C8	960 aa	Known RBP	10.3	□□□□□ -0.76
MSL3-205	ENST00000380692	GRIN2D	O15399	1336 aa		10.3	□□□□□ -0.76
MSL3-205	ENST00000380692	KIAA0100	Q14667	2235 aa	Known RBP	10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	IGKV6D-21	A0A0A0MT36	114 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	DCDC2C	A8MYV0	355 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	HAS3	O00219	553 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	EVI5	O60447	810 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	LGR5	O75473	907 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	F13A1	P00488	732 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	MARK3	P27448	753 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	SLC26A2	P50443	739 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	CDK7	P50613	346 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	PPP2R5C	Q13362	524 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	TMEM266	Q2M3C6	531 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	FAM47C	Q5HY64	1035 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	NCAPH2	Q6IBW4	605 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	PDXDC2P	Q6P474	469 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	NFRKB	Q6P4R8	1299 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	B3GNT9	Q6UX72	402 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	CKAP2L	Q8IYA6	745 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	RDM1	Q8NG50	284 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	PPP1R13L	Q8WUF5	828 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	TNPO1	Q92973	898 aa	Known RBP	10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	RNF25	Q96BH1	459 aa	Predicted RBP	10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	PCYT2	Q99447	389 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	RNPEP	Q9H4A4	650 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	TSHZ2	Q9NRE2	1034 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	GABBR1	Q9UBS5	961 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	VAV3	Q9UKW4	847 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	CEP131	Q9UPN4	1083 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	ATP11B	Q9Y2G3	1177 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	LRRC37A2	A6NM11	1700 aa		10.29	□□□□□ -0.76
MSL3-205	ENST00000380692	EML1	O00423	815 aa		10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	TLR3	O15455	904 aa	Known RBP	10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	PQBP1	O60828	265 aa	Known RBP	10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	BMP15	O95972	392 aa		10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	RTP1	P59025	263 aa		10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	MLLT1	Q03111	559 aa	Predicted RBP	10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	CEBPZ	Q03701	1054 aa	Known RBP	10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	TLE2	Q04725	743 aa		10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	PTPN11	Q06124	597 aa	Predicted RBP	10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	PDIA5	Q14554	519 aa		10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	SNX17	Q15036	470 aa		10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	EPHA7	Q15375	998 aa		10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	SF3A1	Q15459	793 aa	Known RBP	10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	TRIM60	Q495X7	471 aa		10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	DTHD1	Q6ZMT9	781 aa		10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	TRMT1L	Q7Z2T5	733 aa	Known RBP	10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	ANKRD33	Q7Z3H0	272 aa		10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	CCDC60	Q8IWA6	550 aa	Predicted RBP	10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	SLC43A3	Q8NBI5	491 aa		10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	AFAP1L1	Q8TED9	768 aa		10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	ZNF396	Q96N95	335 aa	Predicted RBP	10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	TOX2	Q96NM4	488 aa		10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	TFIP11	Q9UBB9	837 aa	Known RBP	10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	HDAC6	Q9UBN7	1215 aa		10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	MAFB	Q9Y5Q3	323 aa	Predicted RBP	10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	KIAA1217	Q5T5P2	1943 aa		10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	CENPF	P49454	3210 aa		10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	MROH7	Q68CQ1	1323 aa		10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	EMSY	Q7Z589	1322 aa		10.28	□□□□□ -0.76
MSL3-205	ENST00000380692	POTEB3	A0JP26	581 aa		10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	BRD1	O95696	1058 aa		10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	P4HB	P07237	508 aa	Known RBP	10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	SMIM10L2A	P0DMW4	78 aa		10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	SMIM10L2B	P0DMW5	78 aa		10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	GNAT1	P11488	350 aa		10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	PRPH	P41219	470 aa		10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	ATP2C1	P98194	919 aa	Predicted RBP	10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	SPIRE1	Q08AE8	756 aa		10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	PLCB4	Q15147	1175 aa		10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	ARL6IP4	Q66PJ3	421 aa	Known RBP	10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	POTEB	Q6S5H4	581 aa		10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	FOXD4L3	Q6VB84	417 aa	Predicted RBP	10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	SESTD1	Q86VW0	696 aa		10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	ATP6V0A1	Q93050	837 aa		10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	RAB34	Q9BZG1	259 aa		10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	TRPV6	Q9H1D0	765 aa		10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	NRBP2	Q9NSY0	501 aa		10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	SETD4	Q9NVD3	440 aa		10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	LRWD1	Q9UFC0	647 aa		10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	GTF2IRD1	Q9UHL9	959 aa		10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	NOD1	Q9Y239	953 aa		10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	ZDHHC9	Q9Y397	364 aa		10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	ATP6V1D	Q9Y5K8	247 aa		10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	NR2E3	Q9Y5X4	410 aa		10.27	□□□□□ -0.77
MSL3-205	ENST00000380692	CLIC4	Q9Y696	253 aa		10.27	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms