RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 POLRMTO00411 1230 aaKnown RBP17.92■□□□□ 0.46
VPS16-203ENST00000380469 TBX3O15119 743 aa17.92■□□□□ 0.46
VPS16-203ENST00000380469 CALUO43852 315 aaPredicted RBP17.92■□□□□ 0.46
VPS16-203ENST00000380469 AFPP02771 609 aaKnown RBP17.92■□□□□ 0.46
VPS16-203ENST00000380469 EPB41P11171 864 aaKnown RBP17.92■□□□□ 0.46
VPS16-203ENST00000380469 PAK2Q13177 524 aa17.92■□□□□ 0.46
VPS16-203ENST00000380469 GIT2Q14161 759 aa17.92■□□□□ 0.46
VPS16-203ENST00000380469 KNOP1Q1ED39 458 aaKnown RBP17.92■□□□□ 0.46
VPS16-203ENST00000380469 SPAG5Q96R06 1193 aa17.92■□□□□ 0.46
VPS16-203ENST00000380469 NYAP2Q9P242 653 aa17.92■□□□□ 0.46
VPS16-203ENST00000380469 TRAF3IP3Q9Y228 551 aa17.92■□□□□ 0.46
VPS16-203ENST00000380469 TRIM66O15016 1216 aa17.91■□□□□ 0.46
VPS16-203ENST00000380469 IFI16Q16666 785 aaKnown RBP17.91■□□□□ 0.46
VPS16-203ENST00000380469 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.91■□□□□ 0.46
VPS16-203ENST00000380469 SYT2Q8N9I0 419 aaPredicted RBP17.91■□□□□ 0.46
VPS16-203ENST00000380469 TSEN2Q8NCE0 465 aaKnown RBP17.91■□□□□ 0.46
VPS16-203ENST00000380469 CAPS2Q9BXY5 557 aa17.91■□□□□ 0.46
VPS16-203ENST00000380469 EPB41L5Q9HCM4 733 aa17.91■□□□□ 0.46
VPS16-203ENST00000380469 PLCB1Q9NQ66 1216 aa17.91■□□□□ 0.46
VPS16-203ENST00000380469 ATAD5Q96QE3 1844 aa17.91■□□□□ 0.46
VPS16-203ENST00000380469 BTNL10A8MVZ5 291 aa17.9■□□□□ 0.46
VPS16-203ENST00000380469 MEIS2O14770 477 aa17.9■□□□□ 0.46
VPS16-203ENST00000380469 HEXIM1O94992 359 aaKnown RBP17.9■□□□□ 0.46
VPS16-203ENST00000380469 GLI1P08151 1106 aa17.9■□□□□ 0.46
VPS16-203ENST00000380469 RPA1P27694 616 aa17.9■□□□□ 0.46
VPS16-203ENST00000380469 GUCY2DQ02846 1103 aa17.9■□□□□ 0.46
VPS16-203ENST00000380469 NFIAQ12857 509 aa17.9■□□□□ 0.46
VPS16-203ENST00000380469 PABPC4Q13310 644 aaKnown RBP eCLIP17.9■□□□□ 0.46
VPS16-203ENST00000380469 CERKLQ49MI3 558 aaPredicted RBP17.9■□□□□ 0.46
VPS16-203ENST00000380469 Q4G0T1 1027 aa17.9■□□□□ 0.46
VPS16-203ENST00000380469 ETNPPLQ8TBG4 499 aa17.9■□□□□ 0.46
VPS16-203ENST00000380469 IFT81Q8WYA0 676 aa17.9■□□□□ 0.46
VPS16-203ENST00000380469 PACSIN1Q9BY11 444 aa17.9■□□□□ 0.46
VPS16-203ENST00000380469 TMEM51Q9NW97 253 aa17.9■□□□□ 0.46
VPS16-203ENST00000380469 LTBP1Q14766 1721 aa17.9■□□□□ 0.46
VPS16-203ENST00000380469 QSER1Q2KHR3 1735 aa17.9■□□□□ 0.46
VPS16-203ENST00000380469 LRRC37AA6NMS7 1700 aa17.9■□□□□ 0.46
VPS16-203ENST00000380469 MEIS1O00470 390 aa17.9■□□□□ 0.46
VPS16-203ENST00000380469 IRAK1P51617 712 aa17.9■□□□□ 0.46
VPS16-203ENST00000380469 EXOC3L4Q17RC7 722 aa17.9■□□□□ 0.46
VPS16-203ENST00000380469 DNAJC21Q5F1R6 531 aaKnown RBP17.9■□□□□ 0.46
VPS16-203ENST00000380469 UBR3Q6ZT12 1888 aa17.9■□□□□ 0.46
VPS16-203ENST00000380469 KRT12Q99456 494 aa17.9■□□□□ 0.46
VPS16-203ENST00000380469 AMNQ9BXJ7 453 aa17.9■□□□□ 0.46
VPS16-203ENST00000380469 GREB1LQ9C091 1923 aaPredicted RBP17.9■□□□□ 0.46
VPS16-203ENST00000380469 NFU1Q9UMS0 254 aa17.9■□□□□ 0.46
VPS16-203ENST00000380469 SPDYE3A6NKU9 549 aa17.89■□□□□ 0.46
VPS16-203ENST00000380469 PDXKO00764 312 aa17.89■□□□□ 0.46
VPS16-203ENST00000380469 ACTN1P12814 892 aa17.89■□□□□ 0.46
VPS16-203ENST00000380469 XRCC5P13010 732 aaKnown RBP17.89■□□□□ 0.46
VPS16-203ENST00000380469 CASP5P51878 434 aa17.89■□□□□ 0.46
VPS16-203ENST00000380469 PSMC6P62333 389 aa17.89■□□□□ 0.46
VPS16-203ENST00000380469 TNNC1P63316 161 aa17.89■□□□□ 0.46
VPS16-203ENST00000380469 PTK2Q05397 1052 aa17.89■□□□□ 0.46
VPS16-203ENST00000380469 SPIRE1Q08AE8 756 aa17.89■□□□□ 0.46
VPS16-203ENST00000380469 SF3B2Q13435 895 aaKnown RBP17.89■□□□□ 0.46
VPS16-203ENST00000380469 RPS6KA1Q15418 735 aa17.89■□□□□ 0.46
VPS16-203ENST00000380469 IRF2BP2Q7Z5L9 587 aa17.89■□□□□ 0.46
VPS16-203ENST00000380469 SFR1Q86XK3 245 aa17.89■□□□□ 0.46
VPS16-203ENST00000380469 ZFPM1Q8IX07 1006 aa17.89■□□□□ 0.46
VPS16-203ENST00000380469 REEP2Q9BRK0 252 aa17.89■□□□□ 0.46
VPS16-203ENST00000380469 PLEKHA4Q9H4M7 779 aa17.89■□□□□ 0.46
VPS16-203ENST00000380469 CLSTN1O94985 981 aa17.89■□□□□ 0.45
VPS16-203ENST00000380469 FOSP01100 380 aaPredicted RBP17.89■□□□□ 0.45
VPS16-203ENST00000380469 SLURP2P0DP57 97 aa17.89■□□□□ 0.45
VPS16-203ENST00000380469 UCHL3P15374 230 aa17.89■□□□□ 0.45
VPS16-203ENST00000380469 SLC9A1P19634 815 aa17.89■□□□□ 0.45
VPS16-203ENST00000380469 RPL13P26373 211 aaKnown RBP17.89■□□□□ 0.45
VPS16-203ENST00000380469 CRKP46108 304 aa17.89■□□□□ 0.45
VPS16-203ENST00000380469 CARSP49589 748 aaKnown RBP17.89■□□□□ 0.45
VPS16-203ENST00000380469 CFAP58Q5T655 872 aa17.89■□□□□ 0.45
VPS16-203ENST00000380469 CRYGNQ8WXF5 182 aa17.89■□□□□ 0.45
VPS16-203ENST00000380469 FAM20AQ96MK3 541 aa17.89■□□□□ 0.45
VPS16-203ENST00000380469 TMX4Q9H1E5 349 aaPredicted RBP17.89■□□□□ 0.45
VPS16-203ENST00000380469 METTL14Q9HCE5 456 aaKnown RBP17.89■□□□□ 0.45
VPS16-203ENST00000380469 PACSIN2Q9UNF0 486 aaPredicted RBP17.89■□□□□ 0.45
VPS16-203ENST00000380469 A6NNZ2 444 aa17.88■□□□□ 0.45
VPS16-203ENST00000380469 CES2O00748 559 aa17.88■□□□□ 0.45
VPS16-203ENST00000380469 SPATA31C1P0DKV0 1188 aa17.88■□□□□ 0.45
VPS16-203ENST00000380469 TUBB8Q3ZCM7 444 aa17.88■□□□□ 0.45
VPS16-203ENST00000380469 EPM2AIP1Q7L775 607 aaPredicted RBP17.88■□□□□ 0.45
VPS16-203ENST00000380469 FBXO11Q86XK2 927 aa17.88■□□□□ 0.45
VPS16-203ENST00000380469 INPP4AQ96PE3 977 aaPredicted RBP17.88■□□□□ 0.45
VPS16-203ENST00000380469 DNAJC18Q9H819 358 aa17.88■□□□□ 0.45
VPS16-203ENST00000380469 PON1P27169 355 aa17.88■□□□□ 0.45
VPS16-203ENST00000380469 NOP2P46087 812 aaKnown RBP17.88■□□□□ 0.45
VPS16-203ENST00000380469 RNASE9P60153 205 aaKnown RBP17.88■□□□□ 0.45
VPS16-203ENST00000380469 TCP10Q12799 353 aa17.88■□□□□ 0.45
VPS16-203ENST00000380469 ZNF571Q7Z3V5 609 aaPredicted RBP17.88■□□□□ 0.45
VPS16-203ENST00000380469 USP38Q8NB14 1042 aa17.88■□□□□ 0.45
VPS16-203ENST00000380469 GJD4Q96KN9 370 aaPredicted RBP17.88■□□□□ 0.45
VPS16-203ENST00000380469 ZIM3Q96PE6 472 aa17.88■□□□□ 0.45
VPS16-203ENST00000380469 PI4KBQ9UBF8 816 aa17.88■□□□□ 0.45
VPS16-203ENST00000380469 KCNK3O14649 394 aa17.87■□□□□ 0.45
VPS16-203ENST00000380469 IKQ13123 557 aaPredicted RBP17.87■□□□□ 0.45
VPS16-203ENST00000380469 SKIDA1Q1XH10 827 aa17.87■□□□□ 0.45
VPS16-203ENST00000380469 DCAF17Q5H9S7 520 aaPredicted RBP17.87■□□□□ 0.45
VPS16-203ENST00000380469 VPS36Q86VN1 386 aa17.87■□□□□ 0.45
VPS16-203ENST00000380469 PBKQ96KB5 322 aa17.87■□□□□ 0.45
VPS16-203ENST00000380469 CCDC43Q96MW1 224 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms