RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 CDAN1Q8IWY9 1227 aa13.92□□□□□ -0.18
VPS16-202ENST00000380445 ZNF577Q9BSK1 485 aa13.92□□□□□ -0.18
VPS16-202ENST00000380445 FGFBP2Q9BYJ0 223 aa13.92□□□□□ -0.18
VPS16-202ENST00000380445 ZNF341Q9BYN7 854 aa13.92□□□□□ -0.18
VPS16-202ENST00000380445 PNMA2Q9UL42 364 aa13.92□□□□□ -0.18
VPS16-202ENST00000380445 POTEB2H3BUK9 544 aa13.91□□□□□ -0.18
VPS16-202ENST00000380445 EML1O00423 815 aa13.91□□□□□ -0.18
VPS16-202ENST00000380445 ABL1P00519 1130 aa13.91□□□□□ -0.18
VPS16-202ENST00000380445 RPL13P26373 211 aaKnown RBP13.91□□□□□ -0.18
VPS16-202ENST00000380445 VAV2P52735 878 aa13.91□□□□□ -0.18
VPS16-202ENST00000380445 RRAGAQ7L523 313 aa13.91□□□□□ -0.18
VPS16-202ENST00000380445 FRMD5Q7Z6J6 570 aa13.91□□□□□ -0.18
VPS16-202ENST00000380445 SYN2Q92777 582 aaPredicted RBP13.91□□□□□ -0.18
VPS16-202ENST00000380445 OLFML3Q9NRN5 406 aa13.91□□□□□ -0.18
VPS16-202ENST00000380445 KCND2Q9NZV8 630 aa13.91□□□□□ -0.18
VPS16-202ENST00000380445 CEP72Q9P209 647 aa13.91□□□□□ -0.18
VPS16-202ENST00000380445 CCPG1Q9ULG6 757 aa13.91□□□□□ -0.18
VPS16-202ENST00000380445 MYO6Q9UM54 1294 aa13.91□□□□□ -0.18
VPS16-202ENST00000380445 SOCS7O14512 581 aa13.91□□□□□ -0.18
VPS16-202ENST00000380445 NR2F2P24468 414 aa13.91□□□□□ -0.18
VPS16-202ENST00000380445 POLD1P28340 1107 aa13.91□□□□□ -0.18
VPS16-202ENST00000380445 ZNF280AP59817 542 aaPredicted RBP13.91□□□□□ -0.18
VPS16-202ENST00000380445 BMT2Q1RMZ1 405 aa13.91□□□□□ -0.18
VPS16-202ENST00000380445 SAMD1Q6SPF0 538 aaPredicted RBP13.91□□□□□ -0.18
VPS16-202ENST00000380445 EPM2AIP1Q7L775 607 aaPredicted RBP13.91□□□□□ -0.18
VPS16-202ENST00000380445 TPH2Q8IWU9 490 aa13.91□□□□□ -0.18
VPS16-202ENST00000380445 KRT222Q8N1A0 295 aa13.91□□□□□ -0.18
VPS16-202ENST00000380445 SAMD3Q8N6K7 520 aa13.91□□□□□ -0.18
VPS16-202ENST00000380445 TEKT3Q9BXF9 490 aa13.91□□□□□ -0.18
VPS16-202ENST00000380445 FBXO28Q9NVF7 368 aa13.91□□□□□ -0.18
VPS16-202ENST00000380445 MAP3K20Q9NYL2 800 aaKnown RBP13.91□□□□□ -0.18
VPS16-202ENST00000380445 RGL1Q9NZL6 768 aa13.91□□□□□ -0.18
VPS16-202ENST00000380445 CALCOCO1Q9P1Z2 691 aa13.91□□□□□ -0.18
VPS16-202ENST00000380445 LRRC53A6NM62 1247 aa13.9□□□□□ -0.18
VPS16-202ENST00000380445 PHF20L1A8MW92 1017 aa13.9□□□□□ -0.18
VPS16-202ENST00000380445 SLITRK3O94933 977 aa13.9□□□□□ -0.18
VPS16-202ENST00000380445 HSD17B4P51659 736 aa13.9□□□□□ -0.18
VPS16-202ENST00000380445 RINT1Q6NUQ1 792 aa13.9□□□□□ -0.18
VPS16-202ENST00000380445 NACC1Q96RE7 527 aa13.9□□□□□ -0.18
VPS16-202ENST00000380445 RIT2Q99578 217 aa13.9□□□□□ -0.18
VPS16-202ENST00000380445 KIAA1683Q9H0B3 1180 aa13.9□□□□□ -0.18
VPS16-202ENST00000380445 TYW1Q9NV66 732 aaKnown RBP13.9□□□□□ -0.18
VPS16-202ENST00000380445 SSU72P8A0A1W2PR75 194 aa13.9□□□□□ -0.18
VPS16-202ENST00000380445 TULP2O00295 520 aa13.9□□□□□ -0.18
VPS16-202ENST00000380445 AKR1B10O60218 316 aa13.9□□□□□ -0.18
VPS16-202ENST00000380445 LCA5LO95447 670 aa13.9□□□□□ -0.18
VPS16-202ENST00000380445 KCNMA1Q12791 1236 aa13.9□□□□□ -0.18
VPS16-202ENST00000380445 EPHA7Q15375 998 aa13.9□□□□□ -0.18
VPS16-202ENST00000380445 PDXDC1Q6P996 788 aa13.9□□□□□ -0.18
VPS16-202ENST00000380445 NEK9Q8TD19 979 aa13.9□□□□□ -0.18
VPS16-202ENST00000380445 BAP1Q92560 729 aa13.9□□□□□ -0.18
VPS16-202ENST00000380445 DYDC2Q96IM9 177 aa13.9□□□□□ -0.18
VPS16-202ENST00000380445 GLIS2Q9BZE0 524 aaPredicted RBP13.9□□□□□ -0.18
VPS16-202ENST00000380445 METTL14Q9HCE5 456 aaKnown RBP13.9□□□□□ -0.18
VPS16-202ENST00000380445 ARHGAP20Q9P2F6 1191 aa13.9□□□□□ -0.18
VPS16-202ENST00000380445 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.9□□□□□ -0.18
VPS16-202ENST00000380445 CTAGE15A4D2H0 777 aa13.89□□□□□ -0.19
VPS16-202ENST00000380445 EPHB6O15197 1021 aa13.89□□□□□ -0.19
VPS16-202ENST00000380445 CTNND1O60716 968 aaKnown RBP13.89□□□□□ -0.19
VPS16-202ENST00000380445 FAM13AO94988 1023 aa13.89□□□□□ -0.19
VPS16-202ENST00000380445 CTAGE8P0CG41 777 aa13.89□□□□□ -0.19
VPS16-202ENST00000380445 BCRP11274 1271 aa13.89□□□□□ -0.19
VPS16-202ENST00000380445 CAPN2P17655 700 aa13.89□□□□□ -0.19
VPS16-202ENST00000380445 CTTNQ14247 550 aaKnown RBP13.89□□□□□ -0.19
VPS16-202ENST00000380445 STXBP4Q6ZWJ1 553 aa13.89□□□□□ -0.19
VPS16-202ENST00000380445 CTAGE6Q86UF2 777 aa13.89□□□□□ -0.19
VPS16-202ENST00000380445 CTAGE4Q8IX94 777 aa13.89□□□□□ -0.19
VPS16-202ENST00000380445 MXRA8Q9BRK3 442 aa13.89□□□□□ -0.19
VPS16-202ENST00000380445 ZNF446Q9NWS9 450 aa13.89□□□□□ -0.19
VPS16-202ENST00000380445 SEL1LQ9UBV2 794 aa13.89□□□□□ -0.19
VPS16-202ENST00000380445 ARMCX3Q9UH62 379 aaPredicted RBP13.89□□□□□ -0.19
VPS16-202ENST00000380445 ANO9A1A5B4 782 aa13.89□□□□□ -0.19
VPS16-202ENST00000380445 EIF3DO15371 548 aaKnown RBP eCLIP13.89□□□□□ -0.19
VPS16-202ENST00000380445 ATP8B1O43520 1251 aa13.89□□□□□ -0.19
VPS16-202ENST00000380445 CHMP2AO43633 222 aa13.89□□□□□ -0.19
VPS16-202ENST00000380445 GCNT3O95395 438 aa13.89□□□□□ -0.19
VPS16-202ENST00000380445 ERCC3P19447 782 aa13.89□□□□□ -0.19
VPS16-202ENST00000380445 CASP5P51878 434 aa13.89□□□□□ -0.19
VPS16-202ENST00000380445 KIF11P52732 1056 aa13.89□□□□□ -0.19
VPS16-202ENST00000380445 SLC9C1Q4G0N8 1177 aa13.89□□□□□ -0.19
VPS16-202ENST00000380445 NIPA1Q7RTP0 329 aa13.89□□□□□ -0.19
VPS16-202ENST00000380445 SMCR8Q8TEV9 937 aaPredicted RBP13.89□□□□□ -0.19
VPS16-202ENST00000380445 RUSC1Q9BVN2 902 aa13.89□□□□□ -0.19
VPS16-202ENST00000380445 IFIH1Q9BYX4 1025 aaKnown RBP13.89□□□□□ -0.19
VPS16-202ENST00000380445 TRIM10Q9UDY6 481 aa13.89□□□□□ -0.19
VPS16-202ENST00000380445 SMCHD1A6NHR9 2005 aa13.89□□□□□ -0.19
VPS16-202ENST00000380445 IPO5O00410 1097 aaKnown RBP13.88□□□□□ -0.19
VPS16-202ENST00000380445 TUBBP07437 444 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 EIF4A3P38919 411 aaKnown RBP13.88□□□□□ -0.19
VPS16-202ENST00000380445 UBXN2AP68543 259 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 AMPD2Q01433 879 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 PURBQ96QR8 312 aaKnown RBP13.88□□□□□ -0.19
VPS16-202ENST00000380445 LUC7LQ9NQ29 371 aaKnown RBP13.88□□□□□ -0.19
VPS16-202ENST00000380445 FAM53CQ9NYF3 392 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 PUF60Q9UHX1 559 aaKnown RBP13.88□□□□□ -0.19
VPS16-202ENST00000380445 SLC16A3O15427 465 aaKnown RBP13.88□□□□□ -0.19
VPS16-202ENST00000380445 FDX1P10109 184 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 INPP5BP32019 993 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 KCNH2Q12809 1159 aa13.88□□□□□ -0.19
VPS16-202ENST00000380445 SFMBT2Q5VUG0 894 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms