RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 PIGOQ8TEQ8 1089 aa8.8□□□□□ -1
PDLIM5-204ENST00000380176 EIF2AK1Q9BQI3 630 aaKnown RBP8.8□□□□□ -1
PDLIM5-204ENST00000380176 CRACR2AQ9BSW2 395 aa8.8□□□□□ -1
PDLIM5-204ENST00000380176 RUSC1Q9BVN2 902 aa8.8□□□□□ -1
PDLIM5-204ENST00000380176 BHMT2Q9H2M3 363 aa8.8□□□□□ -1
PDLIM5-204ENST00000380176 ANKZF1Q9H8Y5 726 aa8.8□□□□□ -1
PDLIM5-204ENST00000380176 GOPCQ9HD26 462 aa8.8□□□□□ -1
PDLIM5-204ENST00000380176 HDAC9Q9UKV0 1011 aa8.8□□□□□ -1
PDLIM5-204ENST00000380176 MYO6Q9UM54 1294 aa8.8□□□□□ -1
PDLIM5-204ENST00000380176 IVNS1ABPQ9Y6Y0 642 aa8.8□□□□□ -1
PDLIM5-204ENST00000380176 SRGAP2O75044 1071 aa8.8□□□□□ -1
PDLIM5-204ENST00000380176 NOL4O94818 638 aa8.8□□□□□ -1
PDLIM5-204ENST00000380176 CDK17Q00537 523 aa8.8□□□□□ -1
PDLIM5-204ENST00000380176 SETQ01105 290 aaPredicted RBP8.8□□□□□ -1
PDLIM5-204ENST00000380176 CTTNQ14247 550 aaKnown RBP8.8□□□□□ -1
PDLIM5-204ENST00000380176 MCTP2Q6DN12 878 aa8.8□□□□□ -1
PDLIM5-204ENST00000380176 FOXR2Q6PJQ5 311 aa8.8□□□□□ -1
PDLIM5-204ENST00000380176 TMCO3Q6UWJ1 677 aa8.8□□□□□ -1
PDLIM5-204ENST00000380176 SMAP1Q8IYB5 467 aaPredicted RBP8.8□□□□□ -1
PDLIM5-204ENST00000380176 NLRC4Q9NPP4 1024 aa8.8□□□□□ -1
PDLIM5-204ENST00000380176 PGAP2Q9UHJ9 254 aa8.8□□□□□ -1
PDLIM5-204ENST00000380176 PITPNM2Q9BZ72 1349 aa8.8□□□□□ -1
PDLIM5-204ENST00000380176 ATAD5Q96QE3 1844 aa8.8□□□□□ -1
PDLIM5-204ENST00000380176 MACROD2A1Z1Q3 448 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 SFI1A8K8P3 1242 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 CHMP2AO43633 222 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 SASH3O75995 380 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 MYBP10242 640 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 EIF4A3P38919 411 aaKnown RBP8.79□□□□□ -1
PDLIM5-204ENST00000380176 CAP2P40123 477 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 ADAM9Q13443 819 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 DGKZQ13574 1117 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 CC2D1AQ6P1N0 951 aaPredicted RBP8.79□□□□□ -1
PDLIM5-204ENST00000380176 OTOP1Q7RTM1 612 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 TRIM59Q8IWR1 403 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 KRT222Q8N1A0 295 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 CEP112Q8N8E3 955 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 NOA1Q8NC60 698 aaKnown RBP8.79□□□□□ -1
PDLIM5-204ENST00000380176 SPDYE1Q8NFV5 336 aaPredicted RBP8.79□□□□□ -1
PDLIM5-204ENST00000380176 ERMNQ8TAM6 284 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 CCDC42Q96M95 316 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 PNKPQ96T60 521 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 IKZF4Q9H2S9 585 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 RANBP17Q9H2T7 1088 aaKnown RBP8.79□□□□□ -1
PDLIM5-204ENST00000380176 VCPKMTQ9H867 229 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 ARGLU1Q9NWB6 273 aaPredicted RBP8.79□□□□□ -1
PDLIM5-204ENST00000380176 SYNPO2Q9UMS6 1093 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 FER1L6Q2WGJ9 1857 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 CLGNO14967 610 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 KRT86O43790 486 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 PRPF6O94906 941 aaKnown RBP8.79□□□□□ -1
PDLIM5-204ENST00000380176 PLA2G4AP47712 749 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 KIF11P52732 1056 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 CXCL9Q07325 125 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 KCNA1Q09470 495 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 BMS1Q14692 1282 aaKnown RBP8.79□□□□□ -1
PDLIM5-204ENST00000380176 ZNF662Q6ZS27 426 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 TRAPPC11Q7Z392 1133 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 NEK11Q8NG66 645 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.79□□□□□ -1
PDLIM5-204ENST00000380176 GCOM1H8Y6P7 765 aaPredicted RBP8.79□□□□□ -1
PDLIM5-204ENST00000380176 WNT10BO00744 389 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 SLC26A4O43511 780 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 PSMD10O75832 226 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 SLITRK3O94933 977 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 TBC1D8O95759 1140 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 EGFRP00533 1210 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 RHOXF2BP0C7M4 288 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 POLR2MP0CAP2 368 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 VAV2P52735 878 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 HGSNATQ68CP4 663 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 PDXDC1Q6P996 788 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 EPM2AIP1Q7L775 607 aaPredicted RBP8.79□□□□□ -1
PDLIM5-204ENST00000380176 CEP63Q96MT8 703 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 PURBQ96QR8 312 aaKnown RBP8.79□□□□□ -1
PDLIM5-204ENST00000380176 HSD17B14Q9BPX1 270 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 RHOXF2Q9BQY4 288 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 WRAP73Q9P2S5 460 aaPredicted RBP8.79□□□□□ -1
PDLIM5-204ENST00000380176 ZNRF3Q9ULT6 936 aa8.79□□□□□ -1
PDLIM5-204ENST00000380176 SRCAPQ6ZRS2 3230 aa8.78□□□□□ -1
PDLIM5-204ENST00000380176 MYH11P35749 1972 aa8.78□□□□□ -1
PDLIM5-204ENST00000380176 TLR2O60603 784 aa8.78□□□□□ -1
PDLIM5-204ENST00000380176 ARP10275 920 aa8.78□□□□□ -1
PDLIM5-204ENST00000380176 NR2F2P24468 414 aa8.78□□□□□ -1
PDLIM5-204ENST00000380176 HOXA7P31268 230 aaPredicted RBP8.78□□□□□ -1
PDLIM5-204ENST00000380176 INPP5BP32019 993 aa8.78□□□□□ -1
PDLIM5-204ENST00000380176 MARSP56192 900 aaKnown RBP8.78□□□□□ -1
PDLIM5-204ENST00000380176 GFPT1Q06210 699 aaPredicted RBP8.78□□□□□ -1
PDLIM5-204ENST00000380176 WHAMMP3Q1A5X7 153 aa8.78□□□□□ -1
PDLIM5-204ENST00000380176 CACNA2D4Q7Z3S7 1137 aa8.78□□□□□ -1
PDLIM5-204ENST00000380176 TPH2Q8IWU9 490 aa8.78□□□□□ -1
PDLIM5-204ENST00000380176 ZC3H3Q8IXZ2 948 aaKnown RBP8.78□□□□□ -1
PDLIM5-204ENST00000380176 DYDC2Q96IM9 177 aa8.78□□□□□ -1
PDLIM5-204ENST00000380176 AGBL1Q96MI9 1066 aa8.78□□□□□ -1
PDLIM5-204ENST00000380176 MLXIPQ9HAP2 919 aa8.78□□□□□ -1
PDLIM5-204ENST00000380176 RABGAP1Q9Y3P9 1069 aa8.78□□□□□ -1
PDLIM5-204ENST00000380176 PCDHA13Q9Y5I0 950 aa8.78□□□□□ -1
PDLIM5-204ENST00000380176 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.78□□□□□ -1
PDLIM5-204ENST00000380176 ZNF185O15231 689 aa8.78□□□□□ -1
PDLIM5-204ENST00000380176 TBC1D12O60347 775 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms