RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 SH3BGRP55822 239 aaPredicted RBP4.53□□□□□ -1.68
BRCA2-201ENST00000380152 BASP1P80723 227 aaKnown RBP4.53□□□□□ -1.68
BRCA2-201ENST00000380152 PDCD7Q8N8D1 485 aaKnown RBP4.53□□□□□ -1.68
BRCA2-201ENST00000380152 HIPK4Q8NE63 616 aa4.53□□□□□ -1.68
BRCA2-201ENST00000380152 PDZD8Q8NEN9 1154 aa4.53□□□□□ -1.68
BRCA2-201ENST00000380152 CXorf38Q8TB03 319 aa4.53□□□□□ -1.68
BRCA2-201ENST00000380152 HPCAL4Q9UM19 191 aa4.53□□□□□ -1.68
BRCA2-201ENST00000380152 A0A0G2JND7 137 aa4.53□□□□□ -1.68
BRCA2-201ENST00000380152 FCER1AP12319 257 aa4.53□□□□□ -1.68
BRCA2-201ENST00000380152 UBXN2AP68543 259 aa4.53□□□□□ -1.68
BRCA2-201ENST00000380152 CERKLQ49MI3 558 aaPredicted RBP4.53□□□□□ -1.68
BRCA2-201ENST00000380152 ANKRD40Q6AI12 368 aa4.53□□□□□ -1.68
BRCA2-201ENST00000380152 SYNE4Q8N205 404 aa4.53□□□□□ -1.68
BRCA2-201ENST00000380152 KCNV2Q8TDN2 545 aa4.53□□□□□ -1.68
BRCA2-201ENST00000380152 HAUS1Q96CS2 278 aa4.53□□□□□ -1.68
BRCA2-201ENST00000380152 SEC16BQ96JE7 1060 aa4.53□□□□□ -1.68
BRCA2-201ENST00000380152 PCDHA1Q9Y5I3 950 aa4.53□□□□□ -1.68
BRCA2-201ENST00000380152 GOLGA8SH3BPF8 625 aa4.53□□□□□ -1.69
BRCA2-201ENST00000380152 GOLGA8MH3BSY2 632 aa4.53□□□□□ -1.69
BRCA2-201ENST00000380152 TTLL1O95922 423 aa4.53□□□□□ -1.69
BRCA2-201ENST00000380152 BRAFP15056 766 aa4.53□□□□□ -1.69
BRCA2-201ENST00000380152 RPS6KA2Q15349 733 aa4.53□□□□□ -1.69
BRCA2-201ENST00000380152 NBPF10Q6P3W6 841 aaKnown RBP4.53□□□□□ -1.69
BRCA2-201ENST00000380152 RNF34Q969K3 372 aa4.53□□□□□ -1.69
BRCA2-201ENST00000380152 MRPL46Q9H2W6 279 aaKnown RBP4.53□□□□□ -1.69
BRCA2-201ENST00000380152 L2HGDHQ9H9P8 463 aa4.53□□□□□ -1.69
BRCA2-201ENST00000380152 DBR1Q9UK59 544 aaKnown RBP4.53□□□□□ -1.69
BRCA2-201ENST00000380152 SYNGAP1Q96PV0 1343 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 A0A1W2PQC6 194 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 PABPN1LA6NDY0 278 aaKnown RBP4.52□□□□□ -1.69
BRCA2-201ENST00000380152 RNF8O76064 485 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 PRPF6O94906 941 aaKnown RBP4.52□□□□□ -1.69
BRCA2-201ENST00000380152 LTKP29376 864 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 SLC16A2P36021 539 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 SLC8A3P57103 927 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 RPS8P62241 208 aaKnown RBP4.52□□□□□ -1.69
BRCA2-201ENST00000380152 GRIN1Q05586 938 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 KRT81Q14533 505 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 HSP90AA5PQ58FG0 334 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 OR2W6PQ8NHA6 318 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 KANSL2Q9H9L4 492 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 SMARCAL1Q9NZC9 954 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 ADD3Q9UEY8 706 aaKnown RBP4.52□□□□□ -1.69
BRCA2-201ENST00000380152 BCAP29Q9UHQ4 241 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 TULP4Q9NRJ4 1543 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 YEATS2Q9ULM3 1422 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 MYO1EQ12965 1108 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 ZNF211Q13398 564 aaPredicted RBP4.52□□□□□ -1.69
BRCA2-201ENST00000380152 ENAHQ8N8S7 591 aaPredicted RBP4.52□□□□□ -1.69
BRCA2-201ENST00000380152 IWS1Q96ST2 819 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 MPHOSPH6Q99547 160 aaKnown RBP4.52□□□□□ -1.69
BRCA2-201ENST00000380152 CENPKQ9BS16 269 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 A0A1B0GTH6 734 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 CNBD1Q8NA66 436 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 DYDC2Q96IM9 177 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 STRBPQ96SI9 672 aaKnown RBP4.52□□□□□ -1.69
BRCA2-201ENST00000380152 ZNF577Q9BSK1 485 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 ECT2Q9H8V3 914 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 ANKFY1Q9P2R3 1169 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 STK36Q9NRP7 1315 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 PHF20L1A8MW92 1017 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 FGFR4P22455 802 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 ATP2C1P98194 919 aaPredicted RBP4.52□□□□□ -1.69
BRCA2-201ENST00000380152 EXOSC10Q01780 885 aaKnown RBP4.52□□□□□ -1.69
BRCA2-201ENST00000380152 MUM1L1Q5H9M0 696 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 FAM83BQ5T0W9 1011 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 CCNI2Q6ZMN8 369 aaPredicted RBP4.52□□□□□ -1.69
BRCA2-201ENST00000380152 LRRN4CLQ8ND94 238 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 PYROXD1Q8WU10 500 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 HNRNPLLQ8WVV9 542 aaKnown RBP4.52□□□□□ -1.69
BRCA2-201ENST00000380152 PNKPQ96T60 521 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 TSPYL2Q9H2G4 693 aaPredicted RBP4.52□□□□□ -1.69
BRCA2-201ENST00000380152 C1orf112Q9NSG2 853 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 TMEM51Q9NW97 253 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 CEP72Q9P209 647 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 FAF1Q9UNN5 650 aaPredicted RBP4.52□□□□□ -1.69
BRCA2-201ENST00000380152 PLA2G4BP0C869 781 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 HNRNPH1P31943 449 aaKnown RBP4.52□□□□□ -1.69
BRCA2-201ENST00000380152 CARSP49589 748 aaKnown RBP4.52□□□□□ -1.69
BRCA2-201ENST00000380152 CORO7P57737 925 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 RAD9BQ6WBX8 426 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 DCLK2Q8N568 766 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 CPVLQ9H3G5 476 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 PIH1D3Q9NQM4 214 aaKnown RBP4.52□□□□□ -1.69
BRCA2-201ENST00000380152 POTEMA6NI47 508 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 STAM2O75886 525 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 PSMD2Q13200 908 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 CDAN1Q8IWY9 1227 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 CCT6BQ92526 530 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 TTC17Q96AE7 1141 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.52□□□□□ -1.69
BRCA2-201ENST00000380152 SMYD3Q9H7B4 428 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 HAUS2Q9NVX0 235 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 SNX24Q9Y343 169 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 PPRC1Q5VV67 1664 aaKnown RBP4.52□□□□□ -1.69
BRCA2-201ENST00000380152 MROH7-TTC4A0A0A0MT08 1334 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 ZNF804BA4D1E1 1349 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 DEPDC5O75140 1603 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 ROBO2Q9HCK4 1378 aa4.52□□□□□ -1.69
BRCA2-201ENST00000380152 LGALS16A8MUM7 142 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms