RNA–Protein interactions for RNA: ENST00000380151.3

CDKN2A-203, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best)

Gene CDKN2A, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-203ENST00000380151 GNA11P29992 359 aa27.11■■□□□ 1.93
CDKN2A-203ENST00000380151 IGBP1P78318 339 aa27.11■■□□□ 1.93
CDKN2A-203ENST00000380151 FAM117BQ6P1L5 589 aa27.11■■□□□ 1.93
CDKN2A-203ENST00000380151 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.11■■□□□ 1.93
CDKN2A-203ENST00000380151 NIPA1Q7RTP0 329 aa27.11■■□□□ 1.93
CDKN2A-203ENST00000380151 SPRED2Q7Z698 418 aa27.11■■□□□ 1.93
CDKN2A-203ENST00000380151 CCDC148Q8NFR7 591 aa27.11■■□□□ 1.93
CDKN2A-203ENST00000380151 UIMC1Q96RL1 719 aa27.11■■□□□ 1.93
CDKN2A-203ENST00000380151 EPOPA6NHQ4 379 aa27.1■■□□□ 1.93
CDKN2A-203ENST00000380151 RFXAPO00287 272 aa27.1■■□□□ 1.93
CDKN2A-203ENST00000380151 GJB5O95377 273 aa27.1■■□□□ 1.93
CDKN2A-203ENST00000380151 ERICH6BQ5W0A0 696 aa27.1■■□□□ 1.93
CDKN2A-203ENST00000380151 TAF2Q6P1X5 1199 aa27.1■■□□□ 1.93
CDKN2A-203ENST00000380151 ARNTL2Q8WYA1 636 aa27.1■■□□□ 1.93
CDKN2A-203ENST00000380151 SEPT8Q92599 483 aa27.1■■□□□ 1.93
CDKN2A-203ENST00000380151 ZBTB10Q96DT7 871 aa27.1■■□□□ 1.93
CDKN2A-203ENST00000380151 KAT6AQ92794 2004 aa27.09■■□□□ 1.93
CDKN2A-203ENST00000380151 IGLV3-22A0A075B6J6 115 aa27.09■■□□□ 1.93
CDKN2A-203ENST00000380151 MBLAC1A4D2B0 266 aaPredicted RBP27.09■■□□□ 1.93
CDKN2A-203ENST00000380151 CCNE2O96020 404 aa27.09■■□□□ 1.93
CDKN2A-203ENST00000380151 CYP3A4P08684 503 aa27.09■■□□□ 1.93
CDKN2A-203ENST00000380151 MKRN4PQ13434 485 aaPredicted RBP27.09■■□□□ 1.93
CDKN2A-203ENST00000380151 CCDC85BQ15834 202 aaPredicted RBP27.09■■□□□ 1.93
CDKN2A-203ENST00000380151 MCTP2Q6DN12 878 aa27.09■■□□□ 1.93
CDKN2A-203ENST00000380151 PRDM6Q9NQX0 595 aa27.09■■□□□ 1.93
CDKN2A-203ENST00000380151 TRPC6Q9Y210 931 aa27.09■■□□□ 1.93
CDKN2A-203ENST00000380151 MICAL3Q7RTP6 2002 aa27.09■■□□□ 1.93
CDKN2A-203ENST00000380151 INSRRP14616 1297 aa27.08■■□□□ 1.93
CDKN2A-203ENST00000380151 STK3Q13188 491 aa27.08■■□□□ 1.93
CDKN2A-203ENST00000380151 PLCB4Q15147 1175 aa27.08■■□□□ 1.93
CDKN2A-203ENST00000380151 FAM26DQ5JW98 314 aa27.08■■□□□ 1.93
CDKN2A-203ENST00000380151 MARCH8Q5T0T0 291 aa27.08■■□□□ 1.93
CDKN2A-203ENST00000380151 TRIM22Q8IYM9 498 aa27.08■■□□□ 1.93
CDKN2A-203ENST00000380151 MYOCDQ8IZQ8 938 aa27.08■■□□□ 1.93
CDKN2A-203ENST00000380151 MICALL1Q8N3F8 863 aa27.08■■□□□ 1.93
CDKN2A-203ENST00000380151 BICD2Q8TD16 824 aa27.08■■□□□ 1.93
CDKN2A-203ENST00000380151 PDRG1Q9NUG6 133 aa27.08■■□□□ 1.93
CDKN2A-203ENST00000380151 CHRNA1P02708 482 aa27.07■■□□□ 1.92
CDKN2A-203ENST00000380151 AMHP03971 560 aa27.07■■□□□ 1.92
CDKN2A-203ENST00000380151 STAT5BP51692 787 aa27.07■■□□□ 1.92
CDKN2A-203ENST00000380151 ZNF274Q96GC6 653 aaPredicted RBP27.07■■□□□ 1.92
CDKN2A-203ENST00000380151 RAD9AQ99638 391 aa27.07■■□□□ 1.92
CDKN2A-203ENST00000380151 IPO5O00410 1097 aaKnown RBP27.06■■□□□ 1.92
CDKN2A-203ENST00000380151 CPLX1O14810 134 aa27.06■■□□□ 1.92
CDKN2A-203ENST00000380151 SETQ01105 290 aaPredicted RBP27.06■■□□□ 1.92
CDKN2A-203ENST00000380151 SSRP1Q08945 709 aaKnown RBP27.06■■□□□ 1.92
CDKN2A-203ENST00000380151 PLPPR4Q7Z2D5 763 aa27.06■■□□□ 1.92
CDKN2A-203ENST00000380151 RPAINQ86UA6 219 aa27.06■■□□□ 1.92
CDKN2A-203ENST00000380151 RSPH3Q86UC2 560 aa27.06■■□□□ 1.92
CDKN2A-203ENST00000380151 TRAPPC12Q8WVT3 735 aa27.06■■□□□ 1.92
CDKN2A-203ENST00000380151 DNAJB3Q8WWF6 145 aa27.06■■□□□ 1.92
CDKN2A-203ENST00000380151 ZNF577Q9BSK1 485 aa27.06■■□□□ 1.92
CDKN2A-203ENST00000380151 COL25A1Q9BXS0 654 aaPredicted RBP27.06■■□□□ 1.92
CDKN2A-203ENST00000380151 IFIH1Q9BYX4 1025 aaKnown RBP27.06■■□□□ 1.92
CDKN2A-203ENST00000380151 FAM49AQ9H0Q0 323 aaPredicted RBP27.06■■□□□ 1.92
CDKN2A-203ENST00000380151 SIP14410 1827 aa27.05■■□□□ 1.92
CDKN2A-203ENST00000380151 RRN3P2A6NIE6 340 aa27.05■■□□□ 1.92
CDKN2A-203ENST00000380151 BACH1O14867 736 aa27.05■■□□□ 1.92
CDKN2A-203ENST00000380151 DHX15O43143 795 aaKnown RBP27.05■■□□□ 1.92
CDKN2A-203ENST00000380151 ATG7O95352 703 aa27.05■■□□□ 1.92
CDKN2A-203ENST00000380151 GHRP10912 638 aa27.05■■□□□ 1.92
CDKN2A-203ENST00000380151 NLRP5P59047 1200 aa27.05■■□□□ 1.92
CDKN2A-203ENST00000380151 MGAT3Q09327 533 aa27.05■■□□□ 1.92
CDKN2A-203ENST00000380151 VCANP13611 3396 aa27.05■■□□□ 1.92
CDKN2A-203ENST00000380151 PRR16Q569H4 304 aa27.04■■□□□ 1.92
CDKN2A-203ENST00000380151 ABHD15Q6UXT9 468 aa27.04■■□□□ 1.92
CDKN2A-203ENST00000380151 CCDC60Q8IWA6 550 aaPredicted RBP27.04■■□□□ 1.92
CDKN2A-203ENST00000380151 SH3GLB2Q9NR46 395 aa27.04■■□□□ 1.92
CDKN2A-203ENST00000380151 IGKV6D-21A0A0A0MT36 114 aa27.03■■□□□ 1.92
CDKN2A-203ENST00000380151 POTEB3A0JP26 581 aa27.03■■□□□ 1.92
CDKN2A-203ENST00000380151 COL4A4P53420 1690 aaPredicted RBP27.03■■□□□ 1.92
CDKN2A-203ENST00000380151 POTEBQ6S5H4 581 aa27.03■■□□□ 1.92
CDKN2A-203ENST00000380151 CUL9Q8IWT3 2517 aa27.03■■□□□ 1.92
CDKN2A-203ENST00000380151 APBB2Q92870 758 aa27.03■■□□□ 1.92
CDKN2A-203ENST00000380151 MTUS1Q9ULD2 1270 aa27.03■■□□□ 1.92
CDKN2A-203ENST00000380151 CDY2AQ9Y6F7 541 aa27.03■■□□□ 1.92
CDKN2A-203ENST00000380151 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.02■■□□□ 1.92
CDKN2A-203ENST00000380151 LINC01553A4QN01 128 aa27.02■■□□□ 1.92
CDKN2A-203ENST00000380151 DEXIO95424 95 aa27.02■■□□□ 1.92
CDKN2A-203ENST00000380151 CIITAP33076 1130 aa27.02■■□□□ 1.92
CDKN2A-203ENST00000380151 MRPS6P82932 125 aaKnown RBP27.02■■□□□ 1.92
CDKN2A-203ENST00000380151 LPIN1Q14693 890 aa27.02■■□□□ 1.92
CDKN2A-203ENST00000380151 FAM160B1Q5W0V3 765 aa27.02■■□□□ 1.92
CDKN2A-203ENST00000380151 KRT40Q6A162 431 aa27.02■■□□□ 1.92
CDKN2A-203ENST00000380151 MIS18BP1Q6P0N0 1132 aa27.02■■□□□ 1.92
CDKN2A-203ENST00000380151 CPLX2Q6PUV4 134 aaKnown RBP27.02■■□□□ 1.92
CDKN2A-203ENST00000380151 TNPO1Q92973 898 aaKnown RBP27.02■■□□□ 1.92
CDKN2A-203ENST00000380151 LENG9Q96B70 501 aa27.02■■□□□ 1.92
CDKN2A-203ENST00000380151 AIFM3Q96NN9 605 aa27.02■■□□□ 1.92
CDKN2A-203ENST00000380151 MTCH2Q9Y6C9 303 aa27.02■■□□□ 1.92
CDKN2A-203ENST00000380151 GTPBP6O43824 516 aaPredicted RBP27.01■■□□□ 1.91
CDKN2A-203ENST00000380151 SLC26A2P50443 739 aa27.01■■□□□ 1.91
CDKN2A-203ENST00000380151 GRB10Q13322 594 aa27.01■■□□□ 1.91
CDKN2A-203ENST00000380151 PDXDC2PQ6P474 469 aa27.01■■□□□ 1.91
CDKN2A-203ENST00000380151 GDPD5Q8WTR4 605 aa27.01■■□□□ 1.91
CDKN2A-203ENST00000380151 ZNF302Q9NR11 478 aa27.01■■□□□ 1.91
CDKN2A-203ENST00000380151 TBC1D22BQ9NU19 505 aa27.01■■□□□ 1.91
CDKN2A-203ENST00000380151 FBXO47Q5MNV8 452 aa27■■□□□ 1.91
CDKN2A-203ENST00000380151 ATP8B4Q8TF62 1192 aa27■■□□□ 1.91
CDKN2A-203ENST00000380151 TGS1Q96RS0 853 aaKnown RBP27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms