RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 SLF1Q9BQI6 1058 aa11.58□□□□□ -0.55
POLR2J3-201ENST00000379340 HAUS4Q9H6D7 363 aa11.58□□□□□ -0.55
POLR2J3-201ENST00000379340 EMILIN3Q9NT22 766 aa11.58□□□□□ -0.55
POLR2J3-201ENST00000379340 MRFAP1Q9Y605 127 aa11.58□□□□□ -0.55
POLR2J3-201ENST00000379340 EFCAB8A8MWE9 144 aa11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 EIF3CLB5ME19 914 aaKnown RBP11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 TRPA1O75762 1119 aa11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 IPO7O95373 1038 aaKnown RBP11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 EGFRP00533 1210 aa11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 BCRP11274 1271 aa11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 USP14P54578 494 aa11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 GIT2Q14161 759 aa11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 LRRC41Q15345 812 aa11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 BMT2Q1RMZ1 405 aa11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 CCDC40Q4G0X9 1142 aa11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 ARSHQ5FYA8 562 aa11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 DCAF15Q66K64 600 aa11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 OTOP1Q7RTM1 612 aa11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 EHBP1Q8NDI1 1231 aa11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 ACRBPQ8NEB7 543 aa11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 TEPSINQ96N21 525 aa11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 RIT2Q99578 217 aa11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 EIF3CQ99613 913 aaKnown RBP11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 CCDC94Q9BW85 323 aaPredicted RBP11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 TEKT3Q9BXF9 490 aa11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 ZNF341Q9BYN7 854 aa11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 NUCKS1Q9H1E3 243 aaKnown RBP11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 KCTD10Q9H3F6 313 aa11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 LZTFL1Q9NQ48 299 aa11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 RNF186Q9NXI6 227 aa11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 KCND2Q9NZV8 630 aa11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 CCPG1Q9ULG6 757 aa11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 SIK3Q9Y2K2 1263 aa11.58□□□□□ -0.56
POLR2J3-201ENST00000379340 MEIS1O00470 390 aa11.57□□□□□ -0.56
POLR2J3-201ENST00000379340 CETN3O15182 167 aa11.57□□□□□ -0.56
POLR2J3-201ENST00000379340 CALUO43852 315 aaPredicted RBP11.57□□□□□ -0.56
POLR2J3-201ENST00000379340 GAS7O60861 476 aa11.57□□□□□ -0.56
POLR2J3-201ENST00000379340 TBCAO75347 108 aaKnown RBP11.57□□□□□ -0.56
POLR2J3-201ENST00000379340 EPHA7Q15375 998 aa11.57□□□□□ -0.56
POLR2J3-201ENST00000379340 ZYXQ15942 572 aaKnown RBP11.57□□□□□ -0.56
POLR2J3-201ENST00000379340 WDR59Q6PJI9 974 aa11.57□□□□□ -0.56
POLR2J3-201ENST00000379340 EPM2AIP1Q7L775 607 aaPredicted RBP11.57□□□□□ -0.56
POLR2J3-201ENST00000379340 CDAN1Q8IWY9 1227 aa11.57□□□□□ -0.56
POLR2J3-201ENST00000379340 SCFD1Q8WVM8 642 aa11.57□□□□□ -0.56
POLR2J3-201ENST00000379340 UBXN4Q92575 508 aa11.57□□□□□ -0.56
POLR2J3-201ENST00000379340 HSD17B14Q9BPX1 270 aa11.57□□□□□ -0.56
POLR2J3-201ENST00000379340 WDR18Q9BV38 432 aa11.57□□□□□ -0.56
POLR2J3-201ENST00000379340 TRAF3IP3Q9Y228 551 aa11.57□□□□□ -0.56
POLR2J3-201ENST00000379340 UBE4BO95155 1302 aa11.57□□□□□ -0.56
POLR2J3-201ENST00000379340 RPTORQ8N122 1335 aa11.57□□□□□ -0.56
POLR2J3-201ENST00000379340 CTAGE9A4FU28 777 aa11.56□□□□□ -0.56
POLR2J3-201ENST00000379340 SMCHD1A6NHR9 2005 aa11.56□□□□□ -0.56
POLR2J3-201ENST00000379340 ADM5C9JUS6 153 aa11.56□□□□□ -0.56
POLR2J3-201ENST00000379340 PDXKO00764 312 aa11.56□□□□□ -0.56
POLR2J3-201ENST00000379340 FANCGO15287 622 aa11.56□□□□□ -0.56
POLR2J3-201ENST00000379340 TADA3O75528 432 aa11.56□□□□□ -0.56
POLR2J3-201ENST00000379340 ARHGAP25P42331 645 aa11.56□□□□□ -0.56
POLR2J3-201ENST00000379340 PABPC4Q13310 644 aaKnown RBP eCLIP11.56□□□□□ -0.56
POLR2J3-201ENST00000379340 ELF2Q15723 593 aa11.56□□□□□ -0.56
POLR2J3-201ENST00000379340 ZNF569Q5MCW4 686 aa11.56□□□□□ -0.56
POLR2J3-201ENST00000379340 RGMBQ6NW40 437 aa11.56□□□□□ -0.56
POLR2J3-201ENST00000379340 SAMD7Q7Z3H4 446 aa11.56□□□□□ -0.56
POLR2J3-201ENST00000379340 TXLNBQ8N3L3 684 aa11.56□□□□□ -0.56
POLR2J3-201ENST00000379340 CEP112Q8N8E3 955 aa11.56□□□□□ -0.56
POLR2J3-201ENST00000379340 NEK11Q8NG66 645 aa11.56□□□□□ -0.56
POLR2J3-201ENST00000379340 CHP1Q99653 195 aa11.56□□□□□ -0.56
POLR2J3-201ENST00000379340 REEP2Q9BRK0 252 aa11.56□□□□□ -0.56
POLR2J3-201ENST00000379340 MXRA8Q9BRK3 442 aa11.56□□□□□ -0.56
POLR2J3-201ENST00000379340 ZNF577Q9BSK1 485 aa11.56□□□□□ -0.56
POLR2J3-201ENST00000379340 TSGA10Q9BZW7 698 aa11.56□□□□□ -0.56
POLR2J3-201ENST00000379340 AS3MTQ9HBK9 375 aa11.56□□□□□ -0.56
POLR2J3-201ENST00000379340 OLFML3Q9NRN5 406 aa11.56□□□□□ -0.56
POLR2J3-201ENST00000379340 SEL1LQ9UBV2 794 aa11.56□□□□□ -0.56
POLR2J3-201ENST00000379340 CNOT7Q9UIV1 285 aaKnown RBP11.56□□□□□ -0.56
POLR2J3-201ENST00000379340 PLAGL2Q9UPG8 496 aa11.56□□□□□ -0.56
POLR2J3-201ENST00000379340 ZNF536O15090 1300 aa11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 FRMPD4Q14CM0 1322 aa11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 NPHP3-ACAD11A0A0J9YXS1 232 aa11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 EML1O00423 815 aa11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 EIF3DO15371 548 aaKnown RBP eCLIP11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 KRT86O43790 486 aa11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 TAL1P17542 331 aaPredicted RBP11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 RPL13P26373 211 aaKnown RBP11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 PSMC6P62333 389 aa11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 KNOP1Q1ED39 458 aaKnown RBP11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 B3GNT9Q6UX72 402 aa11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 STXBP4Q6ZWJ1 553 aa11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 FRMD5Q7Z6J6 570 aa11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 SFR1Q86XK3 245 aa11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 TRIM59Q8IWR1 403 aa11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 MICALL2Q8IY33 904 aa11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 GLIS3Q8NEA6 775 aa11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 CYP2W1Q8TAV3 490 aa11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 ZC3H15Q8WU90 426 aaKnown RBP11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 CNKSR2Q8WXI2 1034 aa11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 TBC1D5Q92609 795 aa11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 NACC1Q96RE7 527 aa11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 NAPGQ99747 312 aaPredicted RBP11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 CARD6Q9BX69 1037 aa11.55□□□□□ -0.56
POLR2J3-201ENST00000379340 TANGO6Q9C0B7 1094 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms