RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 TRIM59Q8IWR1 403 aa8.96□□□□□ -0.97
PTPRR-203ENST00000378778 LARP4BQ92615 738 aaKnown RBP8.96□□□□□ -0.97
PTPRR-203ENST00000378778 SCLT1Q96NL6 688 aa8.96□□□□□ -0.97
PTPRR-203ENST00000378778 MXD3Q9BW11 206 aa8.96□□□□□ -0.97
PTPRR-203ENST00000378778 CTNNAL1Q9UBT7 734 aa8.96□□□□□ -0.97
PTPRR-203ENST00000378778 RASAL2Q9UJF2 1139 aa8.96□□□□□ -0.97
PTPRR-203ENST00000378778 NOVA2Q9UNW9 492 aaKnown RBP8.96□□□□□ -0.97
PTPRR-203ENST00000378778 C15orf41Q9Y2V0 281 aa8.96□□□□□ -0.97
PTPRR-203ENST00000378778 C10orf71Q711Q0 1435 aa8.96□□□□□ -0.97
PTPRR-203ENST00000378778 AFF2P51816 1311 aa8.96□□□□□ -0.98
PTPRR-203ENST00000378778 STK25O00506 426 aa8.96□□□□□ -0.98
PTPRR-203ENST00000378778 BUB1BO60566 1050 aaPredicted RBP8.96□□□□□ -0.98
PTPRR-203ENST00000378778 NOL4O94818 638 aa8.96□□□□□ -0.98
PTPRR-203ENST00000378778 ZBTB48P10074 688 aaPredicted RBP8.96□□□□□ -0.98
PTPRR-203ENST00000378778 FCER1AP12319 257 aa8.96□□□□□ -0.98
PTPRR-203ENST00000378778 PDE6BP35913 854 aa8.96□□□□□ -0.98
PTPRR-203ENST00000378778 KRT71Q3SY84 523 aa8.96□□□□□ -0.98
PTPRR-203ENST00000378778 TAOK1Q7L7X3 1001 aa8.96□□□□□ -0.98
PTPRR-203ENST00000378778 MIGA1Q8NAN2 632 aa8.96□□□□□ -0.98
PTPRR-203ENST00000378778 UBLCP1Q8WVY7 318 aaPredicted RBP8.96□□□□□ -0.98
PTPRR-203ENST00000378778 TBC1D5Q92609 795 aa8.96□□□□□ -0.98
PTPRR-203ENST00000378778 RAD54LQ92698 747 aa8.96□□□□□ -0.98
PTPRR-203ENST00000378778 CNKSR1Q969H4 720 aa8.96□□□□□ -0.98
PTPRR-203ENST00000378778 CDK5RAP3Q96JB5 506 aa8.96□□□□□ -0.98
PTPRR-203ENST00000378778 ROPN1BQ9BZX4 212 aaPredicted RBP8.96□□□□□ -0.98
PTPRR-203ENST00000378778 ROPN1Q9HAT0 212 aaPredicted RBP8.96□□□□□ -0.98
PTPRR-203ENST00000378778 BMP2KQ9NSY1 1161 aaPredicted RBP8.96□□□□□ -0.98
PTPRR-203ENST00000378778 EHD2Q9NZN4 543 aa8.96□□□□□ -0.98
PTPRR-203ENST00000378778 NENFQ9UMX5 172 aa8.96□□□□□ -0.98
PTPRR-203ENST00000378778 STXBP5LQ9Y2K9 1186 aa8.96□□□□□ -0.98
PTPRR-203ENST00000378778 hCG_1642624A0A1W2PR95 340 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 ESYT3A0FGR9 886 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 POTEFA5A3E0 1075 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 KCNK3O14649 394 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 TLR2O60603 784 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 POTEIP0CG38 1075 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 POTEJP0CG39 1038 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 PDHBP11177 359 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 MAGOHP61326 146 aaKnown RBP8.95□□□□□ -0.98
PTPRR-203ENST00000378778 HLFQ16534 295 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 INF2Q27J81 1249 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 TMEM119Q4V9L6 283 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 POTEEQ6S8J3 1075 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 DNAJC10Q8IXB1 793 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 SDR42E1Q8WUS8 393 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 ATXN2LQ8WWM7 1075 aaKnown RBP8.95□□□□□ -0.98
PTPRR-203ENST00000378778 MAGOHBQ96A72 148 aaKnown RBP8.95□□□□□ -0.98
PTPRR-203ENST00000378778 SPAG5Q96R06 1193 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 GANQ9H2C0 597 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 ZNF287Q9HBT7 754 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.95□□□□□ -0.98
PTPRR-203ENST00000378778 SMARCAL1Q9NZC9 954 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 CORO1CQ9ULV4 474 aaPredicted RBP8.95□□□□□ -0.98
PTPRR-203ENST00000378778 KDM3AQ9Y4C1 1321 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 TSPY2A6NKD2 308 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 F8W031 263 aaPredicted RBP8.95□□□□□ -0.98
PTPRR-203ENST00000378778 KRIT1O00522 736 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 GGPS1O95749 300 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 FTCDO95954 541 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 SCP2P22307 547 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 ATP5DP30049 168 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 BCAMP50895 628 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 PDE6CP51160 858 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 QPCTQ16769 361 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 CAVIN4Q5BKX8 364 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 HYIQ5T013 277 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 TRPM8Q7Z2W7 1104 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 PROSER2Q86WR7 435 aaPredicted RBP8.95□□□□□ -0.98
PTPRR-203ENST00000378778 KLHL7Q8IXQ5 586 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 PNMA1Q8ND90 353 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 PSMB7Q99436 277 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 FMO2Q99518 471 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 LSM14BQ9BX40 385 aaKnown RBP8.95□□□□□ -0.98
PTPRR-203ENST00000378778 NT5C3AQ9H0P0 336 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 PABPC3Q9H361 631 aaKnown RBP8.95□□□□□ -0.98
PTPRR-203ENST00000378778 RPL26L1Q9UNX3 145 aaKnown RBP8.95□□□□□ -0.98
PTPRR-203ENST00000378778 NOC2LQ9Y3T9 749 aaKnown RBP8.95□□□□□ -0.98
PTPRR-203ENST00000378778 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.95□□□□□ -0.98
PTPRR-203ENST00000378778 STK24Q9Y6E0 443 aa8.95□□□□□ -0.98
PTPRR-203ENST00000378778 GTPBP10A4D1E9 387 aaKnown RBP8.94□□□□□ -0.98
PTPRR-203ENST00000378778 PALM3A6NDB9 673 aaPredicted RBP8.94□□□□□ -0.98
PTPRR-203ENST00000378778 ZSCAN5CA6NGD5 496 aaPredicted RBP8.94□□□□□ -0.98
PTPRR-203ENST00000378778 USP17L12C9JPN9 530 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 USP17L21D6R901 530 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 CEP104O60308 925 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 ADAMTS2O95450 1211 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 CYP19A1P11511 503 aaPredicted RBP8.94□□□□□ -0.98
PTPRR-203ENST00000378778 PTENP60484 403 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 POU5F1Q01860 360 aaKnown RBP8.94□□□□□ -0.98
PTPRR-203ENST00000378778 GRB10Q13322 594 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 PPP1R7Q15435 360 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 HIBCHQ6NVY1 386 aaPredicted RBP8.94□□□□□ -0.98
PTPRR-203ENST00000378778 FRMD5Q7Z6J6 570 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 TPCN2Q8NHX9 752 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 NEK9Q8TD19 979 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 L3MBTL3Q96JM7 780 aaPredicted RBP8.94□□□□□ -0.98
PTPRR-203ENST00000378778 MTMR9Q96QG7 549 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 SH3GL3Q99963 347 aa8.94□□□□□ -0.98
PTPRR-203ENST00000378778 MMTAG2Q9BU76 263 aaKnown RBP8.94□□□□□ -0.98
PTPRR-203ENST00000378778 TANGO6Q9C0B7 1094 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms