RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 MSH6P52701 1360 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 DEXIO95424 95 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 BRD1O95696 1058 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 PAMP19021 973 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 LONRF3Q496Y0 759 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 SFR1Q86XK3 245 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 SLC10A4Q96EP9 437 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 KAT6AQ92794 2004 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 POTECB2RU33 542 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 AHCYL1O43865 530 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 GNAT1P11488 350 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 STAG2Q8N3U4 1231 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 SKA2Q8WVK7 121 aaPredicted RBP9.35□□□□□ -0.91
LIG3-202ENST00000378526 TRIM51Q9BSJ1 452 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 SPTLC3Q9NUV7 552 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 MCM8Q9UJA3 840 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 MYO18AQ92614 2054 aaKnown RBP9.35□□□□□ -0.91
LIG3-202ENST00000378526 SRGAP2CP0DJJ0 459 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 MECOMQ03112 1051 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 MORC3Q14149 939 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 CEP44Q9C0F1 390 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 LMBRD1Q9NUN5 540 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 CCNCP24863 283 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 TALDO1P37837 337 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 NLRP11P59045 1033 aaKnown RBP9.35□□□□□ -0.91
LIG3-202ENST00000378526 ABCE1P61221 599 aaKnown RBP9.35□□□□□ -0.91
LIG3-202ENST00000378526 FAM133AQ8N9E0 248 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 PPHLN1Q8NEY8 458 aaKnown RBP9.35□□□□□ -0.91
LIG3-202ENST00000378526 LSM14BQ9BX40 385 aaKnown RBP9.35□□□□□ -0.91
LIG3-202ENST00000378526 USE1Q9NZ43 259 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 NRBP1Q9UHY1 535 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 TGFBR2P37173 567 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 SULT6B1Q6IMI4 303 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 FAM45AQ8TCE6 357 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 TAB2Q9NYJ8 693 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 LCMT1Q9UIC8 334 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 PLAAQ9Y263 795 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 CROCCQ5TZA2 2017 aa9.35□□□□□ -0.91
LIG3-202ENST00000378526 AREL1O15033 823 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 MFN2O95140 757 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 PRLP01236 227 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 FOSL1P15407 271 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 HDLBPQ00341 1268 aaKnown RBP9.34□□□□□ -0.91
LIG3-202ENST00000378526 PLEKHA7Q6IQ23 1121 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 U2AF1L4Q8WU68 220 aaKnown RBP9.34□□□□□ -0.91
LIG3-202ENST00000378526 CYGBQ8WWM9 190 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 OSBPL10Q9BXB5 764 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 EDEM3Q9BZQ6 932 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 NACA2Q9H009 215 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 EML4Q9HC35 981 aaKnown RBP9.34□□□□□ -0.91
LIG3-202ENST00000378526 ERAP1Q9NZ08 941 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 PIK3R2O00459 728 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 CBFA2T3O75081 653 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 OATP04181 439 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 YWHABP31946 246 aaKnown RBP9.34□□□□□ -0.91
LIG3-202ENST00000378526 YWHAHQ04917 246 aaPredicted RBP9.34□□□□□ -0.91
LIG3-202ENST00000378526 SLC12A1Q13621 1099 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 CENPPQ6IPU0 288 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 SPOPLQ6IQ16 392 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 FAM81AQ8TBF8 368 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 ARHGAP45Q92619 1136 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 TSPAN18Q96SJ8 248 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 FBXO28Q9NVF7 368 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 EURLQ9NYK6 297 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 MYH11P35749 1972 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 RASA4BC9J798 803 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 CFAP99D6REC4 459 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 BTN3A3O00478 584 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 RASA4O43374 803 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 RALBP11234 206 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 CORO7P57737 925 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 PUM3Q15397 648 aaKnown RBP9.34□□□□□ -0.91
LIG3-202ENST00000378526 TRADDQ15628 312 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 LVRNQ6Q4G3 990 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 NOP9Q86U38 636 aaKnown RBP9.34□□□□□ -0.91
LIG3-202ENST00000378526 IL16Q14005 1332 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 ZSCAN9O15535 394 aaPredicted RBP9.34□□□□□ -0.91
LIG3-202ENST00000378526 PLTPP55058 493 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 BPIFB4P59827 614 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 DR1Q01658 176 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 KCNK16Q96T55 309 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 DESI2Q9BSY9 194 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 MRPL44Q9H9J2 332 aaKnown RBP9.34□□□□□ -0.91
LIG3-202ENST00000378526 FAM207AQ9NSI2 230 aaPredicted RBP9.34□□□□□ -0.91
LIG3-202ENST00000378526 COPEO14579 308 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 PECAM1P16284 738 aaPredicted RBP9.34□□□□□ -0.91
LIG3-202ENST00000378526 HSPA2P54652 639 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 TBK1Q9UHD2 729 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 WDR91A4D1P6 747 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 A6NJR5 290 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 KRT38O76015 456 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 ITGAXP20702 1163 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 HAND2P61296 217 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 LGALS3BPQ08380 585 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 ARL13BQ3SXY8 428 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 C3orf20Q8ND61 904 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 NHEJ1Q9H9Q4 299 aaPredicted RBP9.34□□□□□ -0.91
LIG3-202ENST00000378526 HSPD1P10809 573 aaKnown RBP9.34□□□□□ -0.91
LIG3-202ENST00000378526 EHHADHQ08426 723 aa9.34□□□□□ -0.91
LIG3-202ENST00000378526 SF3B3Q15393 1217 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms