RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 ARVCFO00192 962 aa13.2□□□□□ -0.3
DEPDC4-202ENST00000378244 EVI5O60447 810 aa13.2□□□□□ -0.3
DEPDC4-202ENST00000378244 F13A1P00488 732 aa13.2□□□□□ -0.3
DEPDC4-202ENST00000378244 PSAPP07602 524 aa13.2□□□□□ -0.3
DEPDC4-202ENST00000378244 CAPN2P17655 700 aa13.2□□□□□ -0.3
DEPDC4-202ENST00000378244 SMAP1Q8IYB5 467 aaPredicted RBP13.2□□□□□ -0.3
DEPDC4-202ENST00000378244 C7orf61Q8IZ16 206 aa13.2□□□□□ -0.3
DEPDC4-202ENST00000378244 C4orf32Q8N8J7 132 aa13.2□□□□□ -0.3
DEPDC4-202ENST00000378244 SMARCAD1Q9H4L7 1026 aa13.2□□□□□ -0.3
DEPDC4-202ENST00000378244 PRDM5Q9NQX1 630 aaPredicted RBP13.2□□□□□ -0.3
DEPDC4-202ENST00000378244 TRMT13Q9NUP7 481 aaKnown RBP13.2□□□□□ -0.3
DEPDC4-202ENST00000378244 ERAP1Q9NZ08 941 aa13.2□□□□□ -0.3
DEPDC4-202ENST00000378244 RGL1Q9NZL6 768 aa13.2□□□□□ -0.3
DEPDC4-202ENST00000378244 HDAC6Q9UBN7 1215 aa13.2□□□□□ -0.3
DEPDC4-202ENST00000378244 TRPC6Q9Y210 931 aa13.2□□□□□ -0.3
DEPDC4-202ENST00000378244 ZDHHC9Q9Y397 364 aa13.2□□□□□ -0.3
DEPDC4-202ENST00000378244 ATG7O95352 703 aa13.19□□□□□ -0.3
DEPDC4-202ENST00000378244 CDC25AP30304 524 aa13.19□□□□□ -0.3
DEPDC4-202ENST00000378244 IGBP1P78318 339 aa13.19□□□□□ -0.3
DEPDC4-202ENST00000378244 ZNF200P98182 395 aaPredicted RBP13.19□□□□□ -0.3
DEPDC4-202ENST00000378244 SPIRE1Q08AE8 756 aa13.19□□□□□ -0.3
DEPDC4-202ENST00000378244 UGCGQ16739 394 aa13.19□□□□□ -0.3
DEPDC4-202ENST00000378244 SH2D3AQ9BRG2 576 aa13.19□□□□□ -0.3
DEPDC4-202ENST00000378244 SETD4Q9NVD3 440 aa13.19□□□□□ -0.3
DEPDC4-202ENST00000378244 LAMA3Q16787 3333 aa13.19□□□□□ -0.3
DEPDC4-202ENST00000378244 SYN1P17600 705 aa13.19□□□□□ -0.3
DEPDC4-202ENST00000378244 PPP2R5CQ13362 524 aa13.19□□□□□ -0.3
DEPDC4-202ENST00000378244 B3GNT9Q6UX72 402 aa13.19□□□□□ -0.3
DEPDC4-202ENST00000378244 ZBTB10Q96DT7 871 aa13.19□□□□□ -0.3
DEPDC4-202ENST00000378244 USP28Q96RU2 1077 aa13.19□□□□□ -0.3
DEPDC4-202ENST00000378244 KATNAL1Q9BW62 490 aa13.19□□□□□ -0.3
DEPDC4-202ENST00000378244 NOD1Q9Y239 953 aa13.19□□□□□ -0.3
DEPDC4-202ENST00000378244 A0A087WWV3 80 aa13.18□□□□□ -0.3
DEPDC4-202ENST00000378244 TMEM150BA6NC51 233 aa13.18□□□□□ -0.3
DEPDC4-202ENST00000378244 VWA3AA6NCI4 1184 aa13.18□□□□□ -0.3
DEPDC4-202ENST00000378244 MARCKSP29966 332 aaPredicted RBP13.18□□□□□ -0.3
DEPDC4-202ENST00000378244 SFNP31947 248 aa13.18□□□□□ -0.3
DEPDC4-202ENST00000378244 JAK3P52333 1124 aa13.18□□□□□ -0.3
DEPDC4-202ENST00000378244 MLLT1Q03111 559 aaPredicted RBP13.18□□□□□ -0.3
DEPDC4-202ENST00000378244 TRAPPC12Q8WVT3 735 aa13.18□□□□□ -0.3
DEPDC4-202ENST00000378244 IGKV6D-21A0A0A0MT36 114 aa13.18□□□□□ -0.3
DEPDC4-202ENST00000378244 PP2D1A8MPX8 630 aa13.18□□□□□ -0.3
DEPDC4-202ENST00000378244 HAS3O00219 553 aa13.18□□□□□ -0.3
DEPDC4-202ENST00000378244 B4GALT4O60513 344 aa13.18□□□□□ -0.3
DEPDC4-202ENST00000378244 LGR5O75473 907 aa13.18□□□□□ -0.3
DEPDC4-202ENST00000378244 SMIM10L2AP0DMW4 78 aa13.18□□□□□ -0.3
DEPDC4-202ENST00000378244 SMIM10L2BP0DMW5 78 aa13.18□□□□□ -0.3
DEPDC4-202ENST00000378244 ATP4AP20648 1035 aa13.18□□□□□ -0.3
DEPDC4-202ENST00000378244 RGS19P49795 217 aa13.18□□□□□ -0.3
DEPDC4-202ENST00000378244 CDK7P50613 346 aa13.18□□□□□ -0.3
DEPDC4-202ENST00000378244 CTTNQ14247 550 aaKnown RBP13.18□□□□□ -0.3
DEPDC4-202ENST00000378244 HIC1Q14526 733 aa13.18□□□□□ -0.3
DEPDC4-202ENST00000378244 IL17AQ16552 155 aa13.18□□□□□ -0.3
DEPDC4-202ENST00000378244 FAM160B1Q5W0V3 765 aa13.18□□□□□ -0.3
DEPDC4-202ENST00000378244 GDF6Q6KF10 455 aaPredicted RBP13.18□□□□□ -0.3
DEPDC4-202ENST00000378244 TPH2Q8IWU9 490 aa13.18□□□□□ -0.3
DEPDC4-202ENST00000378244 EMSYQ7Z589 1322 aa13.18□□□□□ -0.3
DEPDC4-202ENST00000378244 POTEB3A0JP26 581 aa13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 DCDC2CA8MYV0 355 aa13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 ZNF862O60290 1169 aa13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 BRD1O95696 1058 aa13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 CYP2C9P11712 490 aa13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 INSRRP14616 1297 aa13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 ATP2C1P98194 919 aaPredicted RBP13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 ORC2Q13416 577 aaPredicted RBP13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 PLCB4Q15147 1175 aa13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 ZRSR1Q15695 479 aaKnown RBP13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 TMEM266Q2M3C6 531 aa13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 POTEBQ6S5H4 581 aa13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 DTHD1Q6ZMT9 781 aa13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 SH3RF1Q7Z6J0 888 aa13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 FAM126BQ8IXS8 530 aa13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 DYDC2Q96IM9 177 aa13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 WRAP73Q9P2S5 460 aaPredicted RBP13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 ZMYND8Q9ULU4 1186 aaPredicted RBP13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 MAFBQ9Y5Q3 323 aaPredicted RBP13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 ZBTB39O15060 712 aa13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 PDIA4P13667 645 aaKnown RBP13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 NCLP19338 710 aaKnown RBP13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 DNM1Q05193 864 aaKnown RBP13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 GRIN1Q05586 938 aa13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 FAAP100Q0VG06 881 aa13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 PPFIA1Q13136 1202 aa13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 SNX17Q15036 470 aa13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 PTGISQ16647 500 aa13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 NFRKBQ6P4R8 1299 aa13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 PLPPR4Q7Z2D5 763 aa13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 EIF2AK1Q9BQI3 630 aaKnown RBP13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 LRWD1Q9UFC0 647 aa13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 GTF2IRD1Q9UHL9 959 aa13.17□□□□□ -0.3
DEPDC4-202ENST00000378244 PRKCEQ02156 737 aa13.16□□□□□ -0.3
DEPDC4-202ENST00000378244 SLC43A3Q8NBI5 491 aa13.16□□□□□ -0.3
DEPDC4-202ENST00000378244 LMBR1Q8WVP7 490 aa13.16□□□□□ -0.3
DEPDC4-202ENST00000378244 ATP6V0A1Q93050 837 aa13.16□□□□□ -0.3
DEPDC4-202ENST00000378244 LXNQ9BS40 222 aa13.16□□□□□ -0.3
DEPDC4-202ENST00000378244 PPP1R12CQ9BZL4 782 aa13.16□□□□□ -0.3
DEPDC4-202ENST00000378244 TMEM39AQ9NV64 488 aa13.16□□□□□ -0.3
DEPDC4-202ENST00000378244 C17orf102A2RUQ5 167 aa13.16□□□□□ -0.3
DEPDC4-202ENST00000378244 LAD1O00515 517 aa13.16□□□□□ -0.3
DEPDC4-202ENST00000378244 TREHO43280 583 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms