RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 GRAMD1AQ96CP6 724 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 TRIM6Q9C030 488 aaPredicted RBP9.49□□□□□ -0.89
PCDH9-202ENST00000377865 TRIM10Q9UDY6 481 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 ANGPTL2Q9UKU9 493 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 FAM107AO95990 144 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 SKIP12755 728 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 CRKLP46109 303 aaKnown RBP9.49□□□□□ -0.89
PCDH9-202ENST00000377865 TXNRD1Q16881 649 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 NAALADL2Q58DX5 795 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 LRRN4CLQ8ND94 238 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 GJA10Q969M2 543 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 ZNF653Q96CK0 615 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 ZIM3Q96PE6 472 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 FBXL5Q9UKA1 691 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 AGTP01019 485 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 FBXW10Q5XX13 1052 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 ILDR1Q86SU0 546 aaPredicted RBP9.49□□□□□ -0.89
PCDH9-202ENST00000377865 CAVIN3Q969G5 261 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 CCDC17Q96LX7 622 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 ACCSQ96QU6 501 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 ISCUQ9H1K1 167 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 CD2APQ9Y5K6 639 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 SARSP49591 514 aaKnown RBP9.49□□□□□ -0.89
PCDH9-202ENST00000377865 MRPS25P82663 173 aaKnown RBP9.49□□□□□ -0.89
PCDH9-202ENST00000377865 TMED2Q15363 201 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 SLC18A3Q16572 532 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 FIGNQ5HY92 759 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 MIPOL1Q8TD10 442 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 KAZALD1Q96I82 304 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 VCX3AQ9NNX9 186 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 XDHP47989 1333 aa9.49□□□□□ -0.89
PCDH9-202ENST00000377865 PFASO15067 1338 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 RIMBP2O15034 1052 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 FOXP2O15409 715 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 SASH3O75995 380 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 STK10O94804 968 aaKnown RBP9.48□□□□□ -0.89
PCDH9-202ENST00000377865 POLR2MP0CAP2 368 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 PEX19P40855 299 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 BYSLQ13895 437 aaKnown RBP9.48□□□□□ -0.89
PCDH9-202ENST00000377865 FRMD5Q7Z6J6 570 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 SUGP1Q8IWZ8 645 aaKnown RBP9.48□□□□□ -0.89
PCDH9-202ENST00000377865 NT5C1BQ96P26 610 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 MAPK4P31152 587 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 RWDD2BP57060 319 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 PABPC4Q13310 644 aaKnown RBP eCLIP9.48□□□□□ -0.89
PCDH9-202ENST00000377865 AP3B2Q13367 1082 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 HADHQ16836 314 aaKnown RBP9.48□□□□□ -0.89
PCDH9-202ENST00000377865 RNF207Q6ZRF8 634 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 OTUD6AQ7L8S5 288 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 CDAN1Q8IWY9 1227 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 TRIM9Q9C026 710 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 ECT2Q9H8V3 914 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 LCMT1Q9UIC8 334 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 MYO5BQ9ULV0 1848 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 ABCD1P33897 745 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 NSFP46459 744 aaKnown RBP9.48□□□□□ -0.89
PCDH9-202ENST00000377865 ATP2A3Q93084 1043 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 AMNQ9BXJ7 453 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 TMEM51Q9NW97 253 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 MRPL11Q9Y3B7 192 aaKnown RBP9.48□□□□□ -0.89
PCDH9-202ENST00000377865 ESYT3A0FGR9 886 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 NBPF26B4DH59 902 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 SLC16A3O15427 465 aaKnown RBP9.48□□□□□ -0.89
PCDH9-202ENST00000377865 MAP3K7O43318 606 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 CHGBP05060 677 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 ELF1P32519 619 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 KCNH2Q12809 1159 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 NAB2Q15742 525 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 MFSD14BQ5SR56 506 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 NBPF15Q8N660 670 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 CYFIP2Q96F07 1278 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 TCHPQ9BT92 498 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 TMEM60Q9H2L4 133 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 USP40Q9NVE5 1235 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 PCDHA1Q9Y5I3 950 aa9.48□□□□□ -0.89
PCDH9-202ENST00000377865 USP17L8P0C7I0 530 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 PPP2R5AQ15172 486 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 RDH13Q8NBN7 331 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 DDX17Q92841 729 aaKnown RBP9.47□□□□□ -0.89
PCDH9-202ENST00000377865 SAAL1Q96ER3 474 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 RBM12Q9NTZ6 932 aaKnown RBP9.47□□□□□ -0.89
PCDH9-202ENST00000377865 TNS3Q68CZ2 1445 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 BFSP1Q12934 665 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 PDIA5Q14554 519 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 NUGGCQ68CJ6 796 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 PPM1KQ8N3J5 372 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 AFAP1L2Q8N4X5 818 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 SRBD1Q8N5C6 995 aaKnown RBP9.47□□□□□ -0.89
PCDH9-202ENST00000377865 PPP4R1Q8TF05 950 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 SEC16BQ96JE7 1060 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 SUGCTQ9HAC7 445 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 AGPAT5Q9NUQ2 364 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 C3P01024 1663 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 MYO1FO00160 1098 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 ODR4Q5SWX8 454 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 SUSD4Q5VX71 490 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 PAXIP1Q6ZW49 1069 aaPredicted RBP9.47□□□□□ -0.89
PCDH9-202ENST00000377865 CHURC1Q8WUH1 139 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 RILPQ96NA2 401 aa9.47□□□□□ -0.89
PCDH9-202ENST00000377865 NACC1Q96RE7 527 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms