RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 PRR16Q569H4 304 aa19.1■□□□□ 0.65
HMGN4-201ENST00000377575 TAF2Q6P1X5 1199 aa19.1■□□□□ 0.65
HMGN4-201ENST00000377575 TRAF7Q6Q0C0 670 aa19.1■□□□□ 0.65
HMGN4-201ENST00000377575 PLPPR4Q7Z2D5 763 aa19.1■□□□□ 0.65
HMGN4-201ENST00000377575 BLIDQ8IZY5 108 aa19.1■□□□□ 0.65
HMGN4-201ENST00000377575 PHOSPHO2Q8TCD6 241 aa19.1■□□□□ 0.65
HMGN4-201ENST00000377575 CDX2Q99626 313 aaPredicted RBP19.1■□□□□ 0.65
HMGN4-201ENST00000377575 TBC1D22BQ9NU19 505 aa19.1■□□□□ 0.65
HMGN4-201ENST00000377575 TUBE1Q9UJT0 475 aa19.1■□□□□ 0.65
HMGN4-201ENST00000377575 TRPC6Q9Y210 931 aa19.1■□□□□ 0.65
HMGN4-201ENST00000377575 PCDHA11Q9Y5I1 949 aa19.1■□□□□ 0.65
HMGN4-201ENST00000377575 ATG7O95352 703 aa19.09■□□□□ 0.65
HMGN4-201ENST00000377575 SEC24BO95487 1268 aa19.09■□□□□ 0.65
HMGN4-201ENST00000377575 SLC26A2P50443 739 aa19.09■□□□□ 0.65
HMGN4-201ENST00000377575 STAT5BP51692 787 aa19.09■□□□□ 0.65
HMGN4-201ENST00000377575 USP11P51784 963 aa19.09■□□□□ 0.65
HMGN4-201ENST00000377575 NEK4P51957 841 aa19.09■□□□□ 0.65
HMGN4-201ENST00000377575 GPNMBQ14956 572 aa19.09■□□□□ 0.65
HMGN4-201ENST00000377575 FAM160B1Q5W0V3 765 aa19.09■□□□□ 0.65
HMGN4-201ENST00000377575 WASF1Q92558 559 aa19.09■□□□□ 0.65
HMGN4-201ENST00000377575 PCYT2Q99447 389 aa19.09■□□□□ 0.65
HMGN4-201ENST00000377575 ABHD14A-ACY1A0A1B0GW23 586 aa19.08■□□□□ 0.64
HMGN4-201ENST00000377575 RRN3P2A6NIE6 340 aa19.08■□□□□ 0.64
HMGN4-201ENST00000377575 BACH1O14867 736 aa19.08■□□□□ 0.64
HMGN4-201ENST00000377575 RPLP2P05387 115 aaKnown RBP19.08■□□□□ 0.64
HMGN4-201ENST00000377575 CTSHP09668 335 aa19.08■□□□□ 0.64
HMGN4-201ENST00000377575 RABGGTBP53611 331 aa19.08■□□□□ 0.64
HMGN4-201ENST00000377575 WDR5P61964 334 aaKnown RBP19.08■□□□□ 0.64
HMGN4-201ENST00000377575 MBTPS1Q14703 1052 aa19.08■□□□□ 0.64
HMGN4-201ENST00000377575 ZNF746Q6NUN9 644 aaPredicted RBP19.08■□□□□ 0.64
HMGN4-201ENST00000377575 MIS18BP1Q6P0N0 1132 aa19.08■□□□□ 0.64
HMGN4-201ENST00000377575 RSPH3Q86UC2 560 aa19.08■□□□□ 0.64
HMGN4-201ENST00000377575 SMAP1Q8IYB5 467 aaPredicted RBP19.08■□□□□ 0.64
HMGN4-201ENST00000377575 TBCKQ8TEA7 893 aa19.08■□□□□ 0.64
HMGN4-201ENST00000377575 AIFM3Q96NN9 605 aa19.08■□□□□ 0.64
HMGN4-201ENST00000377575 NKX2-4Q9H2Z4 354 aa19.08■□□□□ 0.64
HMGN4-201ENST00000377575 SLC28A3Q9HAS3 691 aa19.08■□□□□ 0.64
HMGN4-201ENST00000377575 MBLAC1A4D2B0 266 aaPredicted RBP19.07■□□□□ 0.64
HMGN4-201ENST00000377575 DHX15O43143 795 aaKnown RBP19.07■□□□□ 0.64
HMGN4-201ENST00000377575 CCNE2O96020 404 aa19.07■□□□□ 0.64
HMGN4-201ENST00000377575 FOSL2P15408 326 aa19.07■□□□□ 0.64
HMGN4-201ENST00000377575 KRT76Q01546 638 aa19.07■□□□□ 0.64
HMGN4-201ENST00000377575 IKBKEQ14164 716 aa19.07■□□□□ 0.64
HMGN4-201ENST00000377575 ABHD15Q6UXT9 468 aa19.07■□□□□ 0.64
HMGN4-201ENST00000377575 KRT25Q7Z3Z0 450 aa19.07■□□□□ 0.64
HMGN4-201ENST00000377575 RPAINQ86UA6 219 aa19.07■□□□□ 0.64
HMGN4-201ENST00000377575 MYLIPQ8WY64 445 aa19.07■□□□□ 0.64
HMGN4-201ENST00000377575 GTF3C6Q969F1 213 aa19.07■□□□□ 0.64
HMGN4-201ENST00000377575 YBX2Q9Y2T7 364 aaKnown RBP19.07■□□□□ 0.64
HMGN4-201ENST00000377575 CHD9Q3L8U1 2897 aa19.06■□□□□ 0.64
HMGN4-201ENST00000377575 IGKV6D-21A0A0A0MT36 114 aa19.06■□□□□ 0.64
HMGN4-201ENST00000377575 POTEB3A0JP26 581 aa19.06■□□□□ 0.64
HMGN4-201ENST00000377575 KIF28PB7ZC32 967 aa19.06■□□□□ 0.64
HMGN4-201ENST00000377575 M0R2N6 131 aa19.06■□□□□ 0.64
HMGN4-201ENST00000377575 INSRRP14616 1297 aa19.06■□□□□ 0.64
HMGN4-201ENST00000377575 IGBP1P78318 339 aa19.06■□□□□ 0.64
HMGN4-201ENST00000377575 GRIN2CQ14957 1233 aa19.06■□□□□ 0.64
HMGN4-201ENST00000377575 PLCB4Q15147 1175 aa19.06■□□□□ 0.64
HMGN4-201ENST00000377575 NONOQ15233 471 aaKnown RBP eCLIP19.06■□□□□ 0.64
HMGN4-201ENST00000377575 ME3Q16798 604 aa19.06■□□□□ 0.64
HMGN4-201ENST00000377575 C8orf34Q49A92 452 aa19.06■□□□□ 0.64
HMGN4-201ENST00000377575 PPP2R2DQ66LE6 453 aa19.06■□□□□ 0.64
HMGN4-201ENST00000377575 POTEBQ6S5H4 581 aa19.06■□□□□ 0.64
HMGN4-201ENST00000377575 HERC6Q8IVU3 1022 aa19.06■□□□□ 0.64
HMGN4-201ENST00000377575 LENG9Q96B70 501 aa19.06■□□□□ 0.64
HMGN4-201ENST00000377575 PHF20Q9BVI0 1012 aa19.06■□□□□ 0.64
HMGN4-201ENST00000377575 ZNF302Q9NR11 478 aa19.06■□□□□ 0.64
HMGN4-201ENST00000377575 ORC3Q9UBD5 711 aaPredicted RBP19.06■□□□□ 0.64
HMGN4-201ENST00000377575 MYO9BQ13459 2157 aa19.05■□□□□ 0.64
HMGN4-201ENST00000377575 NPY5RQ15761 445 aa19.05■□□□□ 0.64
HMGN4-201ENST00000377575 PLEKHG4Q58EX7 1191 aa19.05■□□□□ 0.64
HMGN4-201ENST00000377575 FAM26DQ5JW98 314 aa19.05■□□□□ 0.64
HMGN4-201ENST00000377575 PDXDC2PQ6P474 469 aa19.05■□□□□ 0.64
HMGN4-201ENST00000377575 RUFY4Q6ZNE9 571 aa19.05■□□□□ 0.64
HMGN4-201ENST00000377575 CCDC60Q8IWA6 550 aaPredicted RBP19.05■□□□□ 0.64
HMGN4-201ENST00000377575 SEPT8Q92599 483 aa19.05■□□□□ 0.64
HMGN4-201ENST00000377575 UIMC1Q96RL1 719 aa19.05■□□□□ 0.64
HMGN4-201ENST00000377575 KCNJ14Q9UNX9 436 aa19.05■□□□□ 0.64
HMGN4-201ENST00000377575 LOXHD1Q8IVV2 1947 aa19.05■□□□□ 0.64
HMGN4-201ENST00000377575 CCDC194A0A1B0GVG4 234 aa19.04■□□□□ 0.64
HMGN4-201ENST00000377575 MSH4O15457 936 aa19.04■□□□□ 0.64
HMGN4-201ENST00000377575 LARGE1O95461 756 aa19.04■□□□□ 0.64
HMGN4-201ENST00000377575 CTDNEP1O95476 244 aa19.04■□□□□ 0.64
HMGN4-201ENST00000377575 PSAPP07602 524 aa19.04■□□□□ 0.64
HMGN4-201ENST00000377575 Q4G0T1 1027 aa19.04■□□□□ 0.64
HMGN4-201ENST00000377575 MARCH8Q5T0T0 291 aa19.04■□□□□ 0.64
HMGN4-201ENST00000377575 MOXD1Q6UVY6 613 aa19.04■□□□□ 0.64
HMGN4-201ENST00000377575 NECAB1Q8N987 351 aa19.04■□□□□ 0.64
HMGN4-201ENST00000377575 ATP8B4Q8TF62 1192 aa19.04■□□□□ 0.64
HMGN4-201ENST00000377575 APBB2Q92870 758 aa19.04■□□□□ 0.64
HMGN4-201ENST00000377575 GAS2L1Q99501 681 aaPredicted RBP19.04■□□□□ 0.64
HMGN4-201ENST00000377575 RIT2Q99578 217 aa19.04■□□□□ 0.64
HMGN4-201ENST00000377575 SAMM50Q9Y512 469 aa19.04■□□□□ 0.64
HMGN4-201ENST00000377575 PCDHA10Q9Y5I2 948 aa19.04■□□□□ 0.64
HMGN4-201ENST00000377575 COL1A2P08123 1366 aa19.04■□□□□ 0.64
HMGN4-201ENST00000377575 CYP3A7-CYP3A51PA0A087WV96 503 aa19.03■□□□□ 0.64
HMGN4-201ENST00000377575 WDR64B1ANS9 1081 aa19.03■□□□□ 0.64
HMGN4-201ENST00000377575 HBP1O60381 514 aa19.03■□□□□ 0.64
HMGN4-201ENST00000377575 GAS7O60861 476 aa19.03■□□□□ 0.64
HMGN4-201ENST00000377575 CA3P07451 260 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms