RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 CDK8P49336 464 aa16.94■□□□□ 0.3
FXN-201ENST00000377270 MFSD14BQ5SR56 506 aa16.94■□□□□ 0.3
FXN-201ENST00000377270 MSL1Q68DK7 614 aa16.94■□□□□ 0.3
FXN-201ENST00000377270 HEATR3Q7Z4Q2 680 aa16.94■□□□□ 0.3
FXN-201ENST00000377270 SLF2Q8IX21 1173 aa16.94■□□□□ 0.3
FXN-201ENST00000377270 CNKSR1Q969H4 720 aa16.94■□□□□ 0.3
FXN-201ENST00000377270 BLZF1Q9H2G9 400 aa16.94■□□□□ 0.3
FXN-201ENST00000377270 POLLQ9UGP5 575 aa16.94■□□□□ 0.3
FXN-201ENST00000377270 STXBP3O00186 592 aa16.94■□□□□ 0.3
FXN-201ENST00000377270 KRT38O76015 456 aa16.94■□□□□ 0.3
FXN-201ENST00000377270 LSP1P33241 339 aa16.94■□□□□ 0.3
FXN-201ENST00000377270 SCTRP47872 440 aa16.94■□□□□ 0.3
FXN-201ENST00000377270 ATP1A2P50993 1020 aa16.94■□□□□ 0.3
FXN-201ENST00000377270 POLE2P56282 527 aa16.94■□□□□ 0.3
FXN-201ENST00000377270 ERVK-24P63145 666 aa16.94■□□□□ 0.3
FXN-201ENST00000377270 CCDC38Q502W7 563 aa16.94■□□□□ 0.3
FXN-201ENST00000377270 ADD3Q9UEY8 706 aaKnown RBP16.94■□□□□ 0.3
FXN-201ENST00000377270 FAM184BQ9ULE4 1060 aa16.94■□□□□ 0.3
FXN-201ENST00000377270 ASB3Q9Y575 518 aa16.94■□□□□ 0.3
FXN-201ENST00000377270 SAR1BQ9Y6B6 198 aa16.94■□□□□ 0.3
FXN-201ENST00000377270 CCDC194A0A1B0GVG4 234 aa16.93■□□□□ 0.3
FXN-201ENST00000377270 C6orf229H3BNL8 230 aa16.93■□□□□ 0.3
FXN-201ENST00000377270 PSMD14O00487 310 aa16.93■□□□□ 0.3
FXN-201ENST00000377270 N4BP3O15049 544 aa16.93■□□□□ 0.3
FXN-201ENST00000377270 GYPCP04921 128 aa16.93■□□□□ 0.3
FXN-201ENST00000377270 ALOX15P16050 662 aaPredicted RBP16.93■□□□□ 0.3
FXN-201ENST00000377270 CDC25AP30304 524 aa16.93■□□□□ 0.3
FXN-201ENST00000377270 FXR1P51114 621 aaKnown RBP eCLIP16.93■□□□□ 0.3
FXN-201ENST00000377270 CKAP4Q07065 602 aaKnown RBP16.93■□□□□ 0.3
FXN-201ENST00000377270 SPATA1Q5VX52 437 aa16.93■□□□□ 0.3
FXN-201ENST00000377270 C4orf32Q8N8J7 132 aa16.93■□□□□ 0.3
FXN-201ENST00000377270 TBC1D16Q8TBP0 767 aa16.93■□□□□ 0.3
FXN-201ENST00000377270 AENQ8WTP8 325 aaKnown RBP16.93■□□□□ 0.3
FXN-201ENST00000377270 CCT8L2Q96SF2 557 aa16.93■□□□□ 0.3
FXN-201ENST00000377270 EYA3Q99504 573 aa16.93■□□□□ 0.3
FXN-201ENST00000377270 RABL2BQ9UNT1 228 aa16.93■□□□□ 0.3
FXN-201ENST00000377270 GFPT2O94808 682 aa16.93■□□□□ 0.3
FXN-201ENST00000377270 MKRN4PQ13434 485 aaPredicted RBP16.93■□□□□ 0.3
FXN-201ENST00000377270 ARL6IP4Q66PJ3 421 aaKnown RBP16.93■□□□□ 0.3
FXN-201ENST00000377270 CYP26C1Q6V0L0 522 aa16.93■□□□□ 0.3
FXN-201ENST00000377270 LCA5Q86VQ0 697 aa16.93■□□□□ 0.3
FXN-201ENST00000377270 L3MBTL3Q96JM7 780 aaPredicted RBP16.93■□□□□ 0.3
FXN-201ENST00000377270 EP400Q96L91 3159 aa16.92■□□□□ 0.3
FXN-201ENST00000377270 PALM3A6NDB9 673 aaPredicted RBP16.92■□□□□ 0.3
FXN-201ENST00000377270 PPP1R3GB7ZBB8 358 aa16.92■□□□□ 0.3
FXN-201ENST00000377270 KLRF2D3W0D1 207 aa16.92■□□□□ 0.3
FXN-201ENST00000377270 ENC1O14682 589 aa16.92■□□□□ 0.3
FXN-201ENST00000377270 ATP2C2O75185 946 aa16.92■□□□□ 0.3
FXN-201ENST00000377270 EPB41P11171 864 aaKnown RBP16.92■□□□□ 0.3
FXN-201ENST00000377270 HIBCHQ6NVY1 386 aaPredicted RBP16.92■□□□□ 0.3
FXN-201ENST00000377270 C16orf86Q6ZW13 317 aa16.92■□□□□ 0.3
FXN-201ENST00000377270 MYCBPAPQ8TBZ2 947 aa16.92■□□□□ 0.3
FXN-201ENST00000377270 TRIM11Q96F44 468 aa16.92■□□□□ 0.3
FXN-201ENST00000377270 CTAGE1Q96RT6 745 aa16.92■□□□□ 0.3
FXN-201ENST00000377270 CPVLQ9H3G5 476 aa16.92■□□□□ 0.3
FXN-201ENST00000377270 ATXN10Q9UBB4 475 aa16.92■□□□□ 0.3
FXN-201ENST00000377270 PCDHA6Q9UN73 950 aa16.92■□□□□ 0.3
FXN-201ENST00000377270 PCDHA8Q9Y5H6 950 aa16.92■□□□□ 0.3
FXN-201ENST00000377270 PLCG2P16885 1265 aa16.92■□□□□ 0.3
FXN-201ENST00000377270 LONP1P36776 959 aaKnown RBP16.92■□□□□ 0.3
FXN-201ENST00000377270 SEC24CP53992 1094 aa16.92■□□□□ 0.3
FXN-201ENST00000377270 CBX3Q13185 183 aa16.92■□□□□ 0.3
FXN-201ENST00000377270 PDXDC2PQ6P474 469 aa16.92■□□□□ 0.3
FXN-201ENST00000377270 NLRP14Q86W24 1093 aa16.92■□□□□ 0.3
FXN-201ENST00000377270 OPTNQ96CV9 577 aa16.92■□□□□ 0.3
FXN-201ENST00000377270 SLF1Q9BQI6 1058 aa16.92■□□□□ 0.3
FXN-201ENST00000377270 PYM1Q9BRP8 204 aaKnown RBP16.92■□□□□ 0.3
FXN-201ENST00000377270 POLD4Q9HCU8 107 aa16.92■□□□□ 0.3
FXN-201ENST00000377270 GPCPD1Q9NPB8 672 aa16.92■□□□□ 0.3
FXN-201ENST00000377270 RHBDL2Q9NX52 303 aa16.92■□□□□ 0.3
FXN-201ENST00000377270 BARHL2Q9NY43 387 aa16.92■□□□□ 0.3
FXN-201ENST00000377270 GUCA1BQ9UMX6 200 aa16.92■□□□□ 0.3
FXN-201ENST00000377270 FLT1P17948 1338 aa16.91■□□□□ 0.3
FXN-201ENST00000377270 ITIH6Q6UXX5 1313 aa16.91■□□□□ 0.3
FXN-201ENST00000377270 M0R2N6 131 aa16.91■□□□□ 0.3
FXN-201ENST00000377270 CEP104O60308 925 aa16.91■□□□□ 0.3
FXN-201ENST00000377270 NPTXRO95502 500 aa16.91■□□□□ 0.3
FXN-201ENST00000377270 CLTAP09496 248 aa16.91■□□□□ 0.3
FXN-201ENST00000377270 TUBP50607 506 aa16.91■□□□□ 0.3
FXN-201ENST00000377270 CCHCR1Q8TD31 782 aa16.91■□□□□ 0.3
FXN-201ENST00000377270 ABHD10Q9NUJ1 306 aa16.91■□□□□ 0.3
FXN-201ENST00000377270 UBAP1Q9NZ09 502 aa16.91■□□□□ 0.3
FXN-201ENST00000377270 TRPC5Q9UL62 973 aaPredicted RBP16.91■□□□□ 0.3
FXN-201ENST00000377270 ATP8A1Q9Y2Q0 1164 aa16.91■□□□□ 0.3
FXN-201ENST00000377270 SRGAP2O75044 1071 aa16.91■□□□□ 0.3
FXN-201ENST00000377270 PAPD7Q5XG87 772 aaKnown RBP16.91■□□□□ 0.3
FXN-201ENST00000377270 NEDD1Q8NHV4 660 aa16.91■□□□□ 0.3
FXN-201ENST00000377270 WHAMMQ8TF30 809 aa16.91■□□□□ 0.3
FXN-201ENST00000377270 NAV1Q8NEY1 1877 aa16.91■□□□□ 0.3
FXN-201ENST00000377270 COBLO75128 1261 aa16.9■□□□□ 0.3
FXN-201ENST00000377270 ATP1A1P05023 1023 aaKnown RBP16.9■□□□□ 0.3
FXN-201ENST00000377270 BPIFB4P59827 614 aa16.9■□□□□ 0.3
FXN-201ENST00000377270 FOXD4Q12950 439 aaPredicted RBP16.9■□□□□ 0.3
FXN-201ENST00000377270 KIAA0753Q2KHM9 967 aa16.9■□□□□ 0.3
FXN-201ENST00000377270 DTHD1Q6ZMT9 781 aa16.9■□□□□ 0.3
FXN-201ENST00000377270 SND1Q7KZF4 910 aaKnown RBP eCLIP16.9■□□□□ 0.3
FXN-201ENST00000377270 DYDC1Q8WWB3 177 aa16.9■□□□□ 0.3
FXN-201ENST00000377270 GTPBP6O43824 516 aaPredicted RBP16.9■□□□□ 0.3
FXN-201ENST00000377270 HOXA10P31260 410 aaPredicted RBP16.9■□□□□ 0.3
FXN-201ENST00000377270 GUCY1A3Q02108 690 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms