RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 TNIP1Q15025 636 aa23.94■■□□□ 1.42
RNF39-202ENST00000376751 CLEC4DQ8WXI8 215 aa23.94■■□□□ 1.42
RNF39-202ENST00000376751 HOOK2Q96ED9 719 aa23.94■■□□□ 1.42
RNF39-202ENST00000376751 OGFRQ9NZT2 677 aa23.94■■□□□ 1.42
RNF39-202ENST00000376751 TRAF3IP3Q9Y228 551 aa23.94■■□□□ 1.42
RNF39-202ENST00000376751 NR2F2P24468 414 aa23.94■■□□□ 1.42
RNF39-202ENST00000376751 EIF4A3P38919 411 aaKnown RBP23.94■■□□□ 1.42
RNF39-202ENST00000376751 CHMP4BP1P59074 171 aa23.94■■□□□ 1.42
RNF39-202ENST00000376751 KNOP1Q1ED39 458 aaKnown RBP23.94■■□□□ 1.42
RNF39-202ENST00000376751 IL31RAQ8NI17 732 aa23.94■■□□□ 1.42
RNF39-202ENST00000376751 CCDC42Q96M95 316 aa23.94■■□□□ 1.42
RNF39-202ENST00000376751 ZNF577Q9BSK1 485 aa23.94■■□□□ 1.42
RNF39-202ENST00000376751 LSM14BQ9BX40 385 aaKnown RBP23.94■■□□□ 1.42
RNF39-202ENST00000376751 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.94■■□□□ 1.42
RNF39-202ENST00000376751 DUSP10Q9Y6W6 482 aa23.94■■□□□ 1.42
RNF39-202ENST00000376751 TBCAO75347 108 aaKnown RBP23.93■■□□□ 1.42
RNF39-202ENST00000376751 TUBB2AQ13885 445 aa23.93■■□□□ 1.42
RNF39-202ENST00000376751 BMT2Q1RMZ1 405 aa23.93■■□□□ 1.42
RNF39-202ENST00000376751 B3GNT9Q6UX72 402 aa23.93■■□□□ 1.42
RNF39-202ENST00000376751 RABGGTAQ92696 567 aa23.93■■□□□ 1.42
RNF39-202ENST00000376751 CRACR2AQ9BSW2 395 aa23.93■■□□□ 1.42
RNF39-202ENST00000376751 TUBB2BQ9BVA1 445 aa23.93■■□□□ 1.42
RNF39-202ENST00000376751 ASTN1O14525 1302 aa23.93■■□□□ 1.42
RNF39-202ENST00000376751 RPTORQ8N122 1335 aa23.93■■□□□ 1.42
RNF39-202ENST00000376751 CETN3O15182 167 aa23.92■■□□□ 1.42
RNF39-202ENST00000376751 WDR46O15213 610 aaKnown RBP23.92■■□□□ 1.42
RNF39-202ENST00000376751 C1orf186Q6ZWK4 172 aa23.92■■□□□ 1.42
RNF39-202ENST00000376751 GPR161Q8N6U8 529 aaKnown RBP23.92■■□□□ 1.42
RNF39-202ENST00000376751 PURBQ96QR8 312 aaKnown RBP23.92■■□□□ 1.42
RNF39-202ENST00000376751 SFI1A8K8P3 1242 aa23.92■■□□□ 1.42
RNF39-202ENST00000376751 ITGB5P18084 799 aa23.92■■□□□ 1.42
RNF39-202ENST00000376751 KIF11P52732 1056 aa23.92■■□□□ 1.42
RNF39-202ENST00000376751 VAV2P52735 878 aa23.92■■□□□ 1.42
RNF39-202ENST00000376751 KCNA1Q09470 495 aa23.92■■□□□ 1.42
RNF39-202ENST00000376751 SAMD7Q7Z3H4 446 aa23.92■■□□□ 1.42
RNF39-202ENST00000376751 EDEM3Q9BZQ6 932 aa23.92■■□□□ 1.42
RNF39-202ENST00000376751 KIAA1683Q9H0B3 1180 aa23.92■■□□□ 1.42
RNF39-202ENST00000376751 IPO7O95373 1038 aaKnown RBP23.91■■□□□ 1.42
RNF39-202ENST00000376751 GMPSP49915 693 aaPredicted RBP23.91■■□□□ 1.42
RNF39-202ENST00000376751 SETQ01105 290 aaPredicted RBP23.91■■□□□ 1.42
RNF39-202ENST00000376751 MICALL2Q8IY33 904 aa23.91■■□□□ 1.42
RNF39-202ENST00000376751 KCTD17Q8N5Z5 321 aa23.91■■□□□ 1.42
RNF39-202ENST00000376751 CEP112Q8N8E3 955 aa23.91■■□□□ 1.42
RNF39-202ENST00000376751 PRPF38AQ8NAV1 312 aaKnown RBP23.91■■□□□ 1.42
RNF39-202ENST00000376751 MXRA8Q9BRK3 442 aa23.91■■□□□ 1.42
RNF39-202ENST00000376751 NLRC4Q9NPP4 1024 aa23.91■■□□□ 1.42
RNF39-202ENST00000376751 FAM53CQ9NYF3 392 aa23.91■■□□□ 1.42
RNF39-202ENST00000376751 CEP72Q9P209 647 aa23.91■■□□□ 1.42
RNF39-202ENST00000376751 HDAC6Q9UBN7 1215 aa23.91■■□□□ 1.42
RNF39-202ENST00000376751 ENC1O14682 589 aa23.91■■□□□ 1.42
RNF39-202ENST00000376751 KRT86O43790 486 aa23.91■■□□□ 1.42
RNF39-202ENST00000376751 ATP1A1P05023 1023 aaKnown RBP23.91■■□□□ 1.42
RNF39-202ENST00000376751 HGSNATQ68CP4 663 aa23.91■■□□□ 1.42
RNF39-202ENST00000376751 TRAPPC11Q7Z392 1133 aa23.91■■□□□ 1.42
RNF39-202ENST00000376751 CACNA2D4Q7Z3S7 1137 aa23.91■■□□□ 1.42
RNF39-202ENST00000376751 IKZF4Q9H2S9 585 aa23.91■■□□□ 1.42
RNF39-202ENST00000376751 MYO6Q9UM54 1294 aa23.91■■□□□ 1.42
RNF39-202ENST00000376751 FRMPD4Q14CM0 1322 aa23.9■■□□□ 1.42
RNF39-202ENST00000376751 ZMYM2Q9UBW7 1377 aa23.9■■□□□ 1.42
RNF39-202ENST00000376751 PARP14Q460N5 1801 aa23.9■■□□□ 1.42
RNF39-202ENST00000376751 IPO5O00410 1097 aaKnown RBP23.9■■□□□ 1.42
RNF39-202ENST00000376751 PDXKO00764 312 aa23.9■■□□□ 1.42
RNF39-202ENST00000376751 TLR2O60603 784 aa23.9■■□□□ 1.42
RNF39-202ENST00000376751 GCNT3O95395 438 aa23.9■■□□□ 1.42
RNF39-202ENST00000376751 LCA5LO95447 670 aa23.9■■□□□ 1.42
RNF39-202ENST00000376751 RPS12P25398 132 aaKnown RBP23.9■■□□□ 1.42
RNF39-202ENST00000376751 RASSF7Q02833 373 aa23.9■■□□□ 1.42
RNF39-202ENST00000376751 TNFAIP1Q13829 316 aa23.9■■□□□ 1.42
RNF39-202ENST00000376751 WHAMMP3Q1A5X7 153 aa23.9■■□□□ 1.42
RNF39-202ENST00000376751 TBC1D10BQ4KMP7 808 aaPredicted RBP23.9■■□□□ 1.42
RNF39-202ENST00000376751 MUM1L1Q5H9M0 696 aa23.9■■□□□ 1.42
RNF39-202ENST00000376751 LPAR1Q92633 364 aa23.9■■□□□ 1.42
RNF39-202ENST00000376751 TEKT3Q9BXF9 490 aa23.9■■□□□ 1.42
RNF39-202ENST00000376751 WDR11Q9BZH6 1224 aa23.9■■□□□ 1.42
RNF39-202ENST00000376751 RAVER2Q9HCJ3 691 aaKnown RBP23.9■■□□□ 1.42
RNF39-202ENST00000376751 OLFML3Q9NRN5 406 aa23.9■■□□□ 1.42
RNF39-202ENST00000376751 PPP1R1BQ9UD71 204 aaPredicted RBP23.9■■□□□ 1.42
RNF39-202ENST00000376751 FAM184BQ9ULE4 1060 aa23.9■■□□□ 1.42
RNF39-202ENST00000376751 DOCK1Q14185 1865 aa23.89■■□□□ 1.42
RNF39-202ENST00000376751 MYH11P35749 1972 aa23.89■■□□□ 1.42
RNF39-202ENST00000376751 GAP43P17677 238 aa23.89■■□□□ 1.42
RNF39-202ENST00000376751 KCNH2Q12809 1159 aa23.89■■□□□ 1.42
RNF39-202ENST00000376751 ASTE1Q2TB18 679 aaPredicted RBP23.89■■□□□ 1.42
RNF39-202ENST00000376751 CPXCR1Q8N123 301 aa23.89■■□□□ 1.42
RNF39-202ENST00000376751 PARD6BQ9BYG5 372 aa23.89■■□□□ 1.42
RNF39-202ENST00000376751 TYW1Q9NV66 732 aaKnown RBP23.89■■□□□ 1.42
RNF39-202ENST00000376751 PKD2L1Q9P0L9 805 aa23.89■■□□□ 1.42
RNF39-202ENST00000376751 PCDHA13Q9Y5I0 950 aa23.89■■□□□ 1.42
RNF39-202ENST00000376751 SEC31AO94979 1220 aaKnown RBP23.89■■□□□ 1.41
RNF39-202ENST00000376751 FAM13AO94988 1023 aa23.89■■□□□ 1.41
RNF39-202ENST00000376751 ZRANB2O95218 330 aaKnown RBP eCLIP23.89■■□□□ 1.41
RNF39-202ENST00000376751 NR3C1P04150 777 aa23.89■■□□□ 1.41
RNF39-202ENST00000376751 ALAS1P13196 640 aa23.89■■□□□ 1.41
RNF39-202ENST00000376751 NMT1P30419 496 aaKnown RBP23.89■■□□□ 1.41
RNF39-202ENST00000376751 POLR2FP61218 127 aaKnown RBP23.89■■□□□ 1.41
RNF39-202ENST00000376751 EPHA7Q15375 998 aa23.89■■□□□ 1.41
RNF39-202ENST00000376751 SPA17Q15506 151 aa23.89■■□□□ 1.41
RNF39-202ENST00000376751 IFIH1Q9BYX4 1025 aaKnown RBP23.89■■□□□ 1.41
RNF39-202ENST00000376751 GANQ9H2C0 597 aa23.89■■□□□ 1.41
RNF39-202ENST00000376751 SLC38A10Q9HBR0 1119 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms