RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 SOWAHBA6NEL2 793 aa12.36□□□□□ -0.43
PDPN-202ENST00000376057 POTEB2H3BUK9 544 aa12.36□□□□□ -0.43
PDPN-202ENST00000376057 STRNO43815 780 aa12.36□□□□□ -0.43
PDPN-202ENST00000376057 PLCB2Q00722 1185 aa12.36□□□□□ -0.43
PDPN-202ENST00000376057 FAM26FQ5R3K3 315 aa12.36□□□□□ -0.43
PDPN-202ENST00000376057 VSTM4Q8IW00 320 aa12.36□□□□□ -0.43
PDPN-202ENST00000376057 GPRC5AQ8NFJ5 357 aa12.36□□□□□ -0.43
PDPN-202ENST00000376057 BRI3BPQ8WY22 251 aa12.36□□□□□ -0.43
PDPN-202ENST00000376057 DUSP9Q99956 384 aaKnown RBP12.36□□□□□ -0.43
PDPN-202ENST00000376057 LXNQ9BS40 222 aa12.36□□□□□ -0.43
PDPN-202ENST00000376057 SAMSN1Q9NSI8 373 aaKnown RBP12.36□□□□□ -0.43
PDPN-202ENST00000376057 COL4A3BPQ9Y5P4 624 aa12.36□□□□□ -0.43
PDPN-202ENST00000376057 BTBD19C9JJ37 291 aa12.35□□□□□ -0.43
PDPN-202ENST00000376057 PDHXO00330 501 aa12.35□□□□□ -0.43
PDPN-202ENST00000376057 ATP9AO75110 1047 aa12.35□□□□□ -0.43
PDPN-202ENST00000376057 SERPINC1P01008 464 aa12.35□□□□□ -0.43
PDPN-202ENST00000376057 NFIL3Q16649 462 aa12.35□□□□□ -0.43
PDPN-202ENST00000376057 DYMQ7RTS9 669 aa12.35□□□□□ -0.43
PDPN-202ENST00000376057 NCAPG2Q86XI2 1143 aa12.35□□□□□ -0.43
PDPN-202ENST00000376057 TPH2Q8IWU9 490 aa12.35□□□□□ -0.43
PDPN-202ENST00000376057 KCNN1Q92952 543 aa12.35□□□□□ -0.43
PDPN-202ENST00000376057 PCDHA10Q9Y5I2 948 aa12.35□□□□□ -0.43
PDPN-202ENST00000376057 PASKQ96RG2 1323 aa12.35□□□□□ -0.43
PDPN-202ENST00000376057 CCL15-CCL14A0A0B4J2E2 113 aa12.35□□□□□ -0.43
PDPN-202ENST00000376057 EIF3DO15371 548 aaKnown RBP eCLIP12.35□□□□□ -0.43
PDPN-202ENST00000376057 FCER1AP12319 257 aa12.35□□□□□ -0.43
PDPN-202ENST00000376057 CTTNQ14247 550 aaKnown RBP12.35□□□□□ -0.43
PDPN-202ENST00000376057 CCL15Q16663 113 aa12.35□□□□□ -0.43
PDPN-202ENST00000376057 Q3C1V9 767 aa12.35□□□□□ -0.43
PDPN-202ENST00000376057 ZCWPW2Q504Y3 356 aa12.35□□□□□ -0.43
PDPN-202ENST00000376057 TCP11X2Q5H9J9 407 aa12.35□□□□□ -0.43
PDPN-202ENST00000376057 TRMT44Q8IYL2 757 aaKnown RBP12.35□□□□□ -0.43
PDPN-202ENST00000376057 MYOCDQ8IZQ8 938 aa12.35□□□□□ -0.43
PDPN-202ENST00000376057 FAM43AQ8N2R8 423 aa12.35□□□□□ -0.43
PDPN-202ENST00000376057 ANKRD20A12PQ8NF67 263 aa12.35□□□□□ -0.43
PDPN-202ENST00000376057 PURBQ96QR8 312 aaKnown RBP12.35□□□□□ -0.43
PDPN-202ENST00000376057 BHMT2Q9H2M3 363 aa12.35□□□□□ -0.43
PDPN-202ENST00000376057 PPME1Q9Y570 386 aa12.35□□□□□ -0.43
PDPN-202ENST00000376057 ITIH6Q6UXX5 1313 aa12.35□□□□□ -0.43
PDPN-202ENST00000376057 PLXNB2O15031 1838 aa12.34□□□□□ -0.43
PDPN-202ENST00000376057 IGKV6D-21A0A0A0MT36 114 aa12.34□□□□□ -0.43
PDPN-202ENST00000376057 ESPNB1AK53 854 aa12.34□□□□□ -0.43
PDPN-202ENST00000376057 CCNE2O96020 404 aa12.34□□□□□ -0.43
PDPN-202ENST00000376057 PTMAP06454 111 aaKnown RBP12.34□□□□□ -0.43
PDPN-202ENST00000376057 CDK11BP21127 795 aaKnown RBP12.34□□□□□ -0.43
PDPN-202ENST00000376057 PBX1P40424 430 aa12.34□□□□□ -0.43
PDPN-202ENST00000376057 TBX2Q13207 712 aaPredicted RBP12.34□□□□□ -0.43
PDPN-202ENST00000376057 IRF5Q13568 498 aa12.34□□□□□ -0.43
PDPN-202ENST00000376057 IRF2BP1Q8IU81 584 aa12.34□□□□□ -0.43
PDPN-202ENST00000376057 FGD4Q96M96 766 aa12.34□□□□□ -0.43
PDPN-202ENST00000376057 PARK7Q99497 189 aaKnown RBP12.34□□□□□ -0.43
PDPN-202ENST00000376057 MMP19Q99542 508 aa12.34□□□□□ -0.43
PDPN-202ENST00000376057 REEP2Q9BRK0 252 aa12.34□□□□□ -0.43
PDPN-202ENST00000376057 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.34□□□□□ -0.43
PDPN-202ENST00000376057 WRAP73Q9P2S5 460 aaPredicted RBP12.34□□□□□ -0.43
PDPN-202ENST00000376057 DIS3Q9Y2L1 958 aaKnown RBP12.34□□□□□ -0.43
PDPN-202ENST00000376057 ZNFX1Q9P2E3 1918 aaKnown RBP12.34□□□□□ -0.43
PDPN-202ENST00000376057 PSAPP07602 524 aa12.34□□□□□ -0.43
PDPN-202ENST00000376057 INHBEP58166 350 aa12.34□□□□□ -0.43
PDPN-202ENST00000376057 KCTD2Q14681 263 aa12.34□□□□□ -0.43
PDPN-202ENST00000376057 EDRF1Q3B7T1 1238 aa12.34□□□□□ -0.43
PDPN-202ENST00000376057 KLHL10Q6JEL2 608 aa12.34□□□□□ -0.43
PDPN-202ENST00000376057 ABHD15Q6UXT9 468 aa12.34□□□□□ -0.43
PDPN-202ENST00000376057 SLC17A8Q8NDX2 589 aa12.34□□□□□ -0.43
PDPN-202ENST00000376057 ZNF507Q8TCN5 953 aa12.34□□□□□ -0.43
PDPN-202ENST00000376057 HHIPL1Q96JK4 782 aa12.34□□□□□ -0.43
PDPN-202ENST00000376057 NAP1L5Q96NT1 182 aaPredicted RBP12.34□□□□□ -0.43
PDPN-202ENST00000376057 SEMA6BQ9H3T3 888 aa12.34□□□□□ -0.43
PDPN-202ENST00000376057 JPH1Q9HDC5 661 aaPredicted RBP12.34□□□□□ -0.43
PDPN-202ENST00000376057 NMRK2Q9NPI5 230 aa12.34□□□□□ -0.43
PDPN-202ENST00000376057 SLC9A2Q9UBY0 812 aa12.34□□□□□ -0.43
PDPN-202ENST00000376057 ADGRA2Q96PE1 1338 aa12.34□□□□□ -0.43
PDPN-202ENST00000376057 ARID2Q68CP9 1835 aa12.34□□□□□ -0.43
PDPN-202ENST00000376057 MANSC4A6NHS7 340 aaPredicted RBP12.33□□□□□ -0.43
PDPN-202ENST00000376057 ZNF500O60304 480 aaPredicted RBP12.33□□□□□ -0.43
PDPN-202ENST00000376057 SCP2P22307 547 aa12.33□□□□□ -0.43
PDPN-202ENST00000376057 MARSP56192 900 aaKnown RBP12.33□□□□□ -0.43
PDPN-202ENST00000376057 CNTN2Q02246 1040 aa12.33□□□□□ -0.43
PDPN-202ENST00000376057 CYP4A11Q02928 519 aa12.33□□□□□ -0.43
PDPN-202ENST00000376057 ALCAMQ13740 583 aa12.33□□□□□ -0.43
PDPN-202ENST00000376057 TPD52L1Q16890 204 aaPredicted RBP12.33□□□□□ -0.43
PDPN-202ENST00000376057 FILIP1LQ4L180 1135 aa12.33□□□□□ -0.43
PDPN-202ENST00000376057 ANKRD40Q6AI12 368 aa12.33□□□□□ -0.43
PDPN-202ENST00000376057 CCDC150Q8NCX0 1101 aa12.33□□□□□ -0.43
PDPN-202ENST00000376057 CEP63Q96MT8 703 aa12.33□□□□□ -0.43
PDPN-202ENST00000376057 ST6GALNAC4Q9H4F1 302 aa12.33□□□□□ -0.43
PDPN-202ENST00000376057 SLC39A2Q9NP94 309 aa12.33□□□□□ -0.43
PDPN-202ENST00000376057 INTS13Q9NVM9 706 aa12.33□□□□□ -0.43
PDPN-202ENST00000376057 TRAF3IP3Q9Y228 551 aa12.33□□□□□ -0.43
PDPN-202ENST00000376057 ASB14A6NK59 587 aa12.33□□□□□ -0.44
PDPN-202ENST00000376057 KCNJ18B7U540 433 aa12.33□□□□□ -0.44
PDPN-202ENST00000376057 CHMP2AO43633 222 aa12.33□□□□□ -0.44
PDPN-202ENST00000376057 STBD1O95210 358 aa12.33□□□□□ -0.44
PDPN-202ENST00000376057 PMS1P54277 932 aaKnown RBP12.33□□□□□ -0.44
PDPN-202ENST00000376057 KCNJ12Q14500 433 aa12.33□□□□□ -0.44
PDPN-202ENST00000376057 NEDD9Q14511 834 aa12.33□□□□□ -0.44
PDPN-202ENST00000376057 ATP6V0A1Q93050 837 aa12.33□□□□□ -0.44
PDPN-202ENST00000376057 TSG101Q99816 390 aa12.33□□□□□ -0.44
PDPN-202ENST00000376057 PAGR1Q9BTK6 254 aa12.33□□□□□ -0.44
PDPN-202ENST00000376057 RUSC1Q9BVN2 902 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms