RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 EXOC3L4Q17RC7 722 aa12.51□□□□□ -0.41
PTPN20-204ENST00000374346 TTC31Q49AM3 519 aaPredicted RBP12.51□□□□□ -0.41
PTPN20-204ENST00000374346 USP38Q8NB14 1042 aa12.51□□□□□ -0.41
PTPN20-204ENST00000374346 TSEN2Q8NCE0 465 aaKnown RBP12.51□□□□□ -0.41
PTPN20-204ENST00000374346 CCDC43Q96MW1 224 aaKnown RBP12.51□□□□□ -0.41
PTPN20-204ENST00000374346 GANQ9H2C0 597 aa12.51□□□□□ -0.41
PTPN20-204ENST00000374346 DHX36Q9H2U1 1008 aaKnown RBP12.51□□□□□ -0.41
PTPN20-204ENST00000374346 PLEKHA4Q9H4M7 779 aa12.51□□□□□ -0.41
PTPN20-204ENST00000374346 A0A087WUV0 522 aaPredicted RBP12.5□□□□□ -0.41
PTPN20-204ENST00000374346 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.5□□□□□ -0.41
PTPN20-204ENST00000374346 USP17L15C9J2P7 530 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 USP17L13C9JLJ4 530 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 USP17L11C9JVI0 530 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 USP17L18D6R9N7 530 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 USP17L22D6RA61 530 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 USP17L17D6RBQ6 530 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 USP17L19D6RCP7 530 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 USP17L20D6RJB6 530 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 PDXKO00764 312 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 RAD21O60216 631 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 NOP2P46087 812 aaKnown RBP12.5□□□□□ -0.41
PTPN20-204ENST00000374346 CCT5P48643 541 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 CARSP49589 748 aaKnown RBP12.5□□□□□ -0.41
PTPN20-204ENST00000374346 CACNB1Q02641 598 aaPredicted RBP12.5□□□□□ -0.41
PTPN20-204ENST00000374346 USP17L24Q0WX57 530 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 SKIDA1Q1XH10 827 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 USP17L6PQ6QN14 398 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 DCAF4Q8WV16 495 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 INPP4AQ96PE3 977 aaPredicted RBP12.5□□□□□ -0.41
PTPN20-204ENST00000374346 ZC3H12CQ9C0D7 883 aaKnown RBP12.5□□□□□ -0.41
PTPN20-204ENST00000374346 EHD4Q9H223 541 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 EFCC1Q9HA90 598 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 ATP8B3O60423 1300 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 NPHP3-ACAD11A0A0J9YXS1 232 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 KCNK3O14649 394 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 UCHL3P15374 230 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 RPA1P27694 616 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 PTK2Q05397 1052 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 CUL1Q13616 776 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 QRICH1Q2TAL8 776 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 B4GALNT4Q76KP1 1039 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 SPATS2Q86XZ4 545 aaKnown RBP12.5□□□□□ -0.41
PTPN20-204ENST00000374346 CD302Q8IX05 232 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 SP8Q8IXZ3 490 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 IQCKQ8N0W5 287 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 KCTD17Q8N5Z5 321 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 MBOAT7Q96N66 472 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 FGFBP2Q9BYJ0 223 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 DDX4Q9NQI0 724 aaKnown RBP12.5□□□□□ -0.41
PTPN20-204ENST00000374346 FBXL5Q9UKA1 691 aa12.5□□□□□ -0.41
PTPN20-204ENST00000374346 POTEFA5A3E0 1075 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 SPDYE3A6NKU9 549 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 PPP1R12BO60237 982 aaPredicted RBP12.49□□□□□ -0.41
PTPN20-204ENST00000374346 MED24O75448 989 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 FOSP01100 380 aaPredicted RBP12.49□□□□□ -0.41
PTPN20-204ENST00000374346 POTEIP0CG38 1075 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 TTMPQ5BVD1 217 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 POTEGQ6S5H5 508 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 POTEEQ6S8J3 1075 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 CATSPER3Q86XQ3 398 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 SYCE1Q8N0S2 351 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 SYT2Q8N9I0 419 aaPredicted RBP12.49□□□□□ -0.41
PTPN20-204ENST00000374346 C1orf131Q8NDD1 294 aaKnown RBP12.49□□□□□ -0.41
PTPN20-204ENST00000374346 TEKT1Q969V4 418 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 CALR3Q96L12 384 aaKnown RBP12.49□□□□□ -0.41
PTPN20-204ENST00000374346 GREB1LQ9C091 1923 aaPredicted RBP12.49□□□□□ -0.41
PTPN20-204ENST00000374346 QSER1Q2KHR3 1735 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 G3V3G9 751 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 PPEF1O14829 653 aaPredicted RBP12.49□□□□□ -0.41
PTPN20-204ENST00000374346 SLC16A3O15427 465 aaKnown RBP12.49□□□□□ -0.41
PTPN20-204ENST00000374346 TBCAO75347 108 aaKnown RBP12.49□□□□□ -0.41
PTPN20-204ENST00000374346 KRT14P02533 472 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 ARHGAP4P98171 946 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 GIT2Q14161 759 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 Q4G0T1 1027 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 PRR16Q569H4 304 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 ARSHQ5FYA8 562 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 DCAF8Q5TAQ9 597 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 HHIPL2Q6UWX4 724 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 ACTRT1Q8TDG2 376 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 ARL8AQ96BM9 186 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 LRRC45Q96CN5 670 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 FAM20AQ96MK3 541 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 AMNQ9BXJ7 453 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 TAF1DQ9H5J8 278 aaPredicted RBP12.49□□□□□ -0.41
PTPN20-204ENST00000374346 KANSL2Q9H9L4 492 aa12.49□□□□□ -0.41
PTPN20-204ENST00000374346 TYW1Q9NV66 732 aaKnown RBP12.49□□□□□ -0.41
PTPN20-204ENST00000374346 ESYT3A0FGR9 886 aa12.48□□□□□ -0.41
PTPN20-204ENST00000374346 HMGB1P1B2RPK0 211 aaPredicted RBP12.48□□□□□ -0.41
PTPN20-204ENST00000374346 NDUFAB1O14561 156 aa12.48□□□□□ -0.41
PTPN20-204ENST00000374346 RIMBP2O15034 1052 aa12.48□□□□□ -0.41
PTPN20-204ENST00000374346 KIF4AO95239 1232 aa12.48□□□□□ -0.41
PTPN20-204ENST00000374346 PRKCIP41743 596 aa12.48□□□□□ -0.41
PTPN20-204ENST00000374346 HLTFQ14527 1009 aaKnown RBP eCLIP12.48□□□□□ -0.41
PTPN20-204ENST00000374346 DCAF17Q5H9S7 520 aaPredicted RBP12.48□□□□□ -0.41
PTPN20-204ENST00000374346 TCERG1LQ5VWI1 586 aa12.48□□□□□ -0.41
PTPN20-204ENST00000374346 ALKBH5Q6P6C2 394 aaKnown RBP12.48□□□□□ -0.41
PTPN20-204ENST00000374346 KDM7AQ6ZMT4 941 aa12.48□□□□□ -0.41
PTPN20-204ENST00000374346 IRF2BP2Q7Z5L9 587 aa12.48□□□□□ -0.41
PTPN20-204ENST00000374346 TADA2BQ86TJ2 420 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms