RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 KIFC3Q9BVG8 833 aa14.49□□□□□ -0.09
NCDN-203ENST00000373253 PIM2Q9P1W9 311 aa14.49□□□□□ -0.09
NCDN-203ENST00000373253 PDE4DIPQ5VU43 2346 aa14.49□□□□□ -0.09
NCDN-203ENST00000373253 SMIM23A6NLE4 172 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 KCNK3O14649 394 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 FOSP01100 380 aaPredicted RBP14.48□□□□□ -0.09
NCDN-203ENST00000373253 SSTR3P32745 418 aaPredicted RBP14.48□□□□□ -0.09
NCDN-203ENST00000373253 DALRD3Q5D0E6 543 aaKnown RBP14.48□□□□□ -0.09
NCDN-203ENST00000373253 SND1Q7KZF4 910 aaKnown RBP eCLIP14.48□□□□□ -0.09
NCDN-203ENST00000373253 GLT8D2Q9H1C3 349 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 SH2D4AQ9H788 454 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 UBR2Q8IWV8 1755 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 CCDC66A2RUB6 948 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 SPDYE2BA6NHP3 402 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 EGFRP00533 1210 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 SPDYE6P0CI01 402 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 CDR1P51861 262 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 NPEPPSP55786 919 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 PEX3P56589 373 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 SOX10P56693 466 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 COG2Q14746 738 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 ZNF746Q6NUN9 644 aaPredicted RBP14.48□□□□□ -0.09
NCDN-203ENST00000373253 PPP1R18Q6NYC8 613 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 NOX5Q96PH1 765 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 FANCGO15287 622 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 CALUO43852 315 aaPredicted RBP14.48□□□□□ -0.09
NCDN-203ENST00000373253 GRIPAP1Q4V328 841 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 FAM186BQ8IYM0 893 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 PPM1KQ8N3J5 372 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 LXNQ9BS40 222 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 TEKT3Q9BXF9 490 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 GPRC5CQ9NQ84 441 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 TMEM51Q9NW97 253 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 SERPINA10Q9UK55 444 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 CAPN11Q9UMQ6 739 aa14.48□□□□□ -0.09
NCDN-203ENST00000373253 MYH6P13533 1939 aa14.47□□□□□ -0.09
NCDN-203ENST00000373253 RCCD1A6NED2 376 aa14.47□□□□□ -0.09
NCDN-203ENST00000373253 TISP43B9A030 160 aa14.47□□□□□ -0.09
NCDN-203ENST00000373253 MEIS2O14770 477 aa14.47□□□□□ -0.09
NCDN-203ENST00000373253 ASNSP08243 561 aa14.47□□□□□ -0.09
NCDN-203ENST00000373253 KRT5P13647 590 aa14.47□□□□□ -0.09
NCDN-203ENST00000373253 PLA2G4FQ68DD2 849 aa14.47□□□□□ -0.09
NCDN-203ENST00000373253 MICALL2Q8IY33 904 aa14.47□□□□□ -0.09
NCDN-203ENST00000373253 CTNNBL1Q8WYA6 563 aaPredicted RBP14.47□□□□□ -0.09
NCDN-203ENST00000373253 MTMR9Q96QG7 549 aa14.47□□□□□ -0.09
NCDN-203ENST00000373253 RMDN3Q96TC7 470 aa14.47□□□□□ -0.09
NCDN-203ENST00000373253 WDR11Q9BZH6 1224 aa14.47□□□□□ -0.09
NCDN-203ENST00000373253 DDX41Q9UJV9 622 aaKnown RBP14.47□□□□□ -0.09
NCDN-203ENST00000373253 SUGT1Q9Y2Z0 365 aa14.47□□□□□ -0.09
NCDN-203ENST00000373253 TUBB4AP04350 444 aa14.47□□□□□ -0.09
NCDN-203ENST00000373253 VSNL1P62760 191 aa14.47□□□□□ -0.09
NCDN-203ENST00000373253 MAP3K9P80192 1104 aa14.47□□□□□ -0.09
NCDN-203ENST00000373253 PDIA5Q14554 519 aa14.47□□□□□ -0.09
NCDN-203ENST00000373253 SEPT14Q6ZU15 432 aa14.47□□□□□ -0.09
NCDN-203ENST00000373253 ACBD3Q9H3P7 528 aa14.47□□□□□ -0.09
NCDN-203ENST00000373253 PVALEFA0A1B0GWK0 134 aa14.47□□□□□ -0.09
NCDN-203ENST00000373253 BIRC3Q13489 604 aa14.47□□□□□ -0.09
NCDN-203ENST00000373253 LMBRD2Q68DH5 695 aaPredicted RBP14.47□□□□□ -0.09
NCDN-203ENST00000373253 MAATS1Q7Z4T9 603 aa14.47□□□□□ -0.09
NCDN-203ENST00000373253 NR3C1P04150 777 aa14.46□□□□□ -0.09
NCDN-203ENST00000373253 GCLMP48507 274 aa14.46□□□□□ -0.09
NCDN-203ENST00000373253 FXR2P51116 673 aaKnown RBP eCLIP14.46□□□□□ -0.09
NCDN-203ENST00000373253 CEP55Q53EZ4 464 aa14.46□□□□□ -0.09
NCDN-203ENST00000373253 ODF2Q5BJF6 829 aa14.46□□□□□ -0.09
NCDN-203ENST00000373253 RTKN2Q8IZC4 609 aa14.46□□□□□ -0.09
NCDN-203ENST00000373253 RIN2Q8WYP3 895 aaPredicted RBP14.46□□□□□ -0.09
NCDN-203ENST00000373253 MAGEF1Q9HAY2 307 aa14.46□□□□□ -0.09
NCDN-203ENST00000373253 PARVGQ9HBI0 331 aa14.46□□□□□ -0.09
NCDN-203ENST00000373253 CAPN6Q9Y6Q1 641 aa14.46□□□□□ -0.09
NCDN-203ENST00000373253 hCG_1984214I3L0E3 225 aa14.46□□□□□ -0.09
NCDN-203ENST00000373253 SLC16A4O15374 487 aa14.46□□□□□ -0.09
NCDN-203ENST00000373253 ZBED4O75132 1171 aa14.46□□□□□ -0.09
NCDN-203ENST00000373253 MYL1P05976 194 aa14.46□□□□□ -0.09
NCDN-203ENST00000373253 LRRC63Q05C16 580 aa14.46□□□□□ -0.09
NCDN-203ENST00000373253 CYFIP1Q7L576 1253 aa14.46□□□□□ -0.09
NCDN-203ENST00000373253 APTXQ7Z2E3 356 aaKnown RBP14.46□□□□□ -0.09
NCDN-203ENST00000373253 ZNF713Q8N859 430 aaPredicted RBP14.46□□□□□ -0.09
NCDN-203ENST00000373253 SAAL1Q96ER3 474 aa14.46□□□□□ -0.09
NCDN-203ENST00000373253 ZNRF3Q9ULT6 936 aa14.46□□□□□ -0.09
NCDN-203ENST00000373253 SNED1Q8TER0 1413 aa14.46□□□□□ -0.09
NCDN-203ENST00000373253 DUOX1Q9NRD9 1551 aa14.46□□□□□ -0.09
NCDN-203ENST00000373253 COL16A1Q07092 1604 aaPredicted RBP14.46□□□□□ -0.1
NCDN-203ENST00000373253 GRM1Q13255 1194 aa14.46□□□□□ -0.1
NCDN-203ENST00000373253 KIAA1755Q5JYT7 1200 aa14.46□□□□□ -0.1
NCDN-203ENST00000373253 NBPF12Q5TAG4 269 aaPredicted RBP14.46□□□□□ -0.1
NCDN-203ENST00000373253 C8orf74Q6P047 294 aa14.46□□□□□ -0.1
NCDN-203ENST00000373253 STXBP4Q6ZWJ1 553 aa14.46□□□□□ -0.1
NCDN-203ENST00000373253 NLRX1Q86UT6 975 aa14.46□□□□□ -0.1
NCDN-203ENST00000373253 SCFD1Q8WVM8 642 aa14.46□□□□□ -0.1
NCDN-203ENST00000373253 RABGGTAQ92696 567 aa14.46□□□□□ -0.1
NCDN-203ENST00000373253 PNKPQ96T60 521 aa14.46□□□□□ -0.1
NCDN-203ENST00000373253 PACSIN1Q9BY11 444 aa14.46□□□□□ -0.1
NCDN-203ENST00000373253 NHSL1Q5SYE7 1610 aa14.45□□□□□ -0.1
NCDN-203ENST00000373253 WNT10BO00744 389 aa14.45□□□□□ -0.1
NCDN-203ENST00000373253 PPP1R2P41236 205 aa14.45□□□□□ -0.1
NCDN-203ENST00000373253 CETN1Q12798 172 aa14.45□□□□□ -0.1
NCDN-203ENST00000373253 SCLT1Q96NL6 688 aa14.45□□□□□ -0.1
NCDN-203ENST00000373253 NAP1L4Q99733 375 aaKnown RBP14.45□□□□□ -0.1
NCDN-203ENST00000373253 AP1M1Q9BXS5 423 aa14.45□□□□□ -0.1
NCDN-203ENST00000373253 ESYT2A0FGR8 921 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms