RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 MTMR9Q96QG7 549 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 NAPGQ99747 312 aaPredicted RBP7.08□□□□□ -1.28
CHD6-202ENST00000373222 NOC4LQ9BVI4 516 aaKnown RBP7.08□□□□□ -1.28
CHD6-202ENST00000373222 RIOX1Q9H6W3 641 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 DNAJC18Q9H819 358 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 ARGLU1Q9NWB6 273 aaPredicted RBP7.08□□□□□ -1.28
CHD6-202ENST00000373222 LRWD1Q9UFC0 647 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 KCNG1Q9UIX4 513 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 SIPA1L1O43166 1804 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 GAKO14976 1311 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 POLRMTO00411 1230 aaKnown RBP7.08□□□□□ -1.28
CHD6-202ENST00000373222 ENPP3O14638 875 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 SSBP05455 408 aaKnown RBP eCLIP7.08□□□□□ -1.28
CHD6-202ENST00000373222 TPM1P09493 284 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 XRCC5P13010 732 aaKnown RBP7.08□□□□□ -1.28
CHD6-202ENST00000373222 CCNE1P24864 410 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 SHMT1P34896 483 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 GABPAQ06546 454 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 SPAG1Q07617 926 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 SMC1AQ14683 1233 aaKnown RBP7.08□□□□□ -1.28
CHD6-202ENST00000373222 BEND6Q5SZJ8 279 aaPredicted RBP7.08□□□□□ -1.28
CHD6-202ENST00000373222 FKBP15Q5T1M5 1219 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 KRT25Q7Z3Z0 450 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 TMC4Q7Z404 712 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 ANKRD20A12PQ8NF67 263 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 HAS1Q92839 578 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 TRERF1Q96PN7 1200 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 IER2Q9BTL4 223 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 UBXN6Q9BZV1 441 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 THAP9Q9H5L6 903 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 QTRT2Q9H974 415 aaKnown RBP7.08□□□□□ -1.28
CHD6-202ENST00000373222 NHEJ1Q9H9Q4 299 aaPredicted RBP7.08□□□□□ -1.28
CHD6-202ENST00000373222 DBNDD1Q9H9R9 158 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 MLXIPQ9HAP2 919 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 PDE11AQ9HCR9 933 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 ARFGAP3Q9NP61 516 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 METTL5Q9NRN9 209 aaKnown RBP7.08□□□□□ -1.28
CHD6-202ENST00000373222 CAPN11Q9UMQ6 739 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 CENPFP49454 3210 aa7.08□□□□□ -1.28
CHD6-202ENST00000373222 E9PMD0 336 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 MYBL2P10244 700 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 EEF1GP26641 437 aaKnown RBP7.07□□□□□ -1.28
CHD6-202ENST00000373222 CXCR5P32302 372 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 PDE6BP35913 854 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 PRPHP41219 470 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 MTMR3Q13615 1198 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 MSL1Q68DK7 614 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 CERKQ8TCT0 537 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 SNX29Q8TEQ0 813 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 CRACR2AQ9BSW2 395 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 IKZF4Q9H2S9 585 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 PLEKHA4Q9H4M7 779 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 USP40Q9NVE5 1235 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 ARHGAP20Q9P2F6 1191 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 SALL4Q9UJQ4 1053 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 MYO6Q9UM54 1294 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 CAPN6Q9Y6Q1 641 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 BRWD3Q6RI45 1802 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 LRRIQ3A6PVS8 624 aaPredicted RBP7.07□□□□□ -1.28
CHD6-202ENST00000373222 GNA11P29992 359 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 ADCY7P51828 1080 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 JAG1P78504 1218 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 MYBPC2Q14324 1141 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 EZH2Q15910 746 aaKnown RBP7.07□□□□□ -1.28
CHD6-202ENST00000373222 ENOX2Q16206 610 aaKnown RBP7.07□□□□□ -1.28
CHD6-202ENST00000373222 CCDC96Q2M329 555 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 ODR4Q5SWX8 454 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 CDC42EP5Q6NZY7 148 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 TREML4Q6UXN2 200 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 C2CD5Q86YS7 1000 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 KIAA0825Q8IV33 1275 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 NELFCDQ8IXH7 590 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 LARP4BQ92615 738 aaKnown RBP7.07□□□□□ -1.28
CHD6-202ENST00000373222 CCDC51Q96ER9 411 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 RBM17Q96I25 401 aaKnown RBP7.07□□□□□ -1.28
CHD6-202ENST00000373222 SCYL1Q96KG9 808 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 C7orf25Q9BPX7 421 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 NRXN2Q9P2S2 1712 aa7.07□□□□□ -1.28
CHD6-202ENST00000373222 AFF2P51816 1311 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 COL11A2P13942 1736 aaPredicted RBP7.06□□□□□ -1.28
CHD6-202ENST00000373222 DDTLA6NHG4 134 aaPredicted RBP7.06□□□□□ -1.28
CHD6-202ENST00000373222 POTECB2RU33 542 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 PPEF1O14829 653 aaPredicted RBP7.06□□□□□ -1.28
CHD6-202ENST00000373222 NCK2O43639 380 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 C21orf2O43822 256 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 DNM2P50570 870 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 ZNF543Q08ER8 600 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 STIM1Q13586 685 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 GALNT17Q6IS24 598 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 C15orf52Q6ZUT6 534 aaKnown RBP7.06□□□□□ -1.28
CHD6-202ENST00000373222 SV2BQ7L1I2 683 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 TRAPPC11Q7Z392 1133 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 KIAA1328Q86T90 577 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 RAVER1Q8IY67 606 aaKnown RBP7.06□□□□□ -1.28
CHD6-202ENST00000373222 RIN2Q8WYP3 895 aaPredicted RBP7.06□□□□□ -1.28
CHD6-202ENST00000373222 JAKMIP2Q96AA8 810 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 MMRN2Q9H8L6 949 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 NLRC4Q9NPP4 1024 aa7.06□□□□□ -1.28
CHD6-202ENST00000373222 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.06□□□□□ -1.28
CHD6-202ENST00000373222 PARP2Q9UGN5 583 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms