RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 OXER1Q8TDS5 423 aa25.83■■□□□ 1.73
RAPGEF1-203ENST00000372195 IFNAR1P17181 557 aa25.83■■□□□ 1.73
RAPGEF1-203ENST00000372195 CDK8P49336 464 aa25.83■■□□□ 1.73
RAPGEF1-203ENST00000372195 SNAP23O00161 211 aa25.83■■□□□ 1.72
RAPGEF1-203ENST00000372195 MUM1L1Q5H9M0 696 aa25.83■■□□□ 1.72
RAPGEF1-203ENST00000372195 IGSF1Q8N6C5 1336 aa25.82■■□□□ 1.72
RAPGEF1-203ENST00000372195 FGGP02679 453 aa25.82■■□□□ 1.72
RAPGEF1-203ENST00000372195 RSRC2Q7L4I2 434 aaKnown RBP25.82■■□□□ 1.72
RAPGEF1-203ENST00000372195 FMO2Q99518 471 aa25.82■■□□□ 1.72
RAPGEF1-203ENST00000372195 ZNF18P17022 549 aa25.82■■□□□ 1.72
RAPGEF1-203ENST00000372195 PASD1Q8IV76 773 aa25.82■■□□□ 1.72
RAPGEF1-203ENST00000372195 CACNB3P54284 484 aa25.82■■□□□ 1.72
RAPGEF1-203ENST00000372195 N4BP2L2Q92802 583 aaPredicted RBP25.82■■□□□ 1.72
RAPGEF1-203ENST00000372195 EXT2Q93063 718 aa25.82■■□□□ 1.72
RAPGEF1-203ENST00000372195 RNF207Q6ZRF8 634 aa25.82■■□□□ 1.72
RAPGEF1-203ENST00000372195 TRIM11Q96F44 468 aa25.82■■□□□ 1.72
RAPGEF1-203ENST00000372195 USP27XA6NNY8 438 aa25.81■■□□□ 1.72
RAPGEF1-203ENST00000372195 ATP8B1O43520 1251 aa25.81■■□□□ 1.72
RAPGEF1-203ENST00000372195 POLE2P56282 527 aa25.81■■□□□ 1.72
RAPGEF1-203ENST00000372195 KCTD2Q14681 263 aa25.81■■□□□ 1.72
RAPGEF1-203ENST00000372195 ZNF394Q53GI3 561 aa25.81■■□□□ 1.72
RAPGEF1-203ENST00000372195 TMEM206Q9H813 350 aa25.81■■□□□ 1.72
RAPGEF1-203ENST00000372195 CYTH2Q99418 400 aa25.81■■□□□ 1.72
RAPGEF1-203ENST00000372195 NCK2O43639 380 aa25.81■■□□□ 1.72
RAPGEF1-203ENST00000372195 EIF2AK2P19525 551 aaKnown RBP25.81■■□□□ 1.72
RAPGEF1-203ENST00000372195 HIPK4Q8NE63 616 aa25.81■■□□□ 1.72
RAPGEF1-203ENST00000372195 SERPINB13Q9UIV8 391 aa25.81■■□□□ 1.72
RAPGEF1-203ENST00000372195 GOLGA8MH3BSY2 632 aa25.81■■□□□ 1.72
RAPGEF1-203ENST00000372195 SUSD4Q5VX71 490 aa25.81■■□□□ 1.72
RAPGEF1-203ENST00000372195 RAB44Q7Z6P3 723 aaPredicted RBP25.81■■□□□ 1.72
RAPGEF1-203ENST00000372195 HEMGNQ9BXL5 484 aa25.81■■□□□ 1.72
RAPGEF1-203ENST00000372195 POTEMA6NI47 508 aa25.8■■□□□ 1.72
RAPGEF1-203ENST00000372195 PNMA6AP0CW24 399 aaPredicted RBP25.8■■□□□ 1.72
RAPGEF1-203ENST00000372195 IL6STP40189 918 aaPredicted RBP25.8■■□□□ 1.72
RAPGEF1-203ENST00000372195 MAGI3Q5TCQ9 1506 aa25.8■■□□□ 1.72
RAPGEF1-203ENST00000372195 SPOPLQ6IQ16 392 aa25.8■■□□□ 1.72
RAPGEF1-203ENST00000372195 ELAC2Q9BQ52 826 aaKnown RBP25.8■■□□□ 1.72
RAPGEF1-203ENST00000372195 RNF168Q8IYW5 571 aaPredicted RBP25.8■■□□□ 1.72
RAPGEF1-203ENST00000372195 MXI1P50539 228 aa25.8■■□□□ 1.72
RAPGEF1-203ENST00000372195 STX1BP61266 288 aa25.8■■□□□ 1.72
RAPGEF1-203ENST00000372195 CCDC17Q96LX7 622 aa25.8■■□□□ 1.72
RAPGEF1-203ENST00000372195 PEX3P56589 373 aa25.8■■□□□ 1.72
RAPGEF1-203ENST00000372195 SMAD1Q15797 465 aaKnown RBP25.8■■□□□ 1.72
RAPGEF1-203ENST00000372195 RMDN2Q96LZ7 410 aa25.8■■□□□ 1.72
RAPGEF1-203ENST00000372195 THOC5Q13769 683 aaKnown RBP25.79■■□□□ 1.72
RAPGEF1-203ENST00000372195 TBC1D1Q86TI0 1168 aaPredicted RBP25.79■■□□□ 1.72
RAPGEF1-203ENST00000372195 PHEXP78562 749 aa25.79■■□□□ 1.72
RAPGEF1-203ENST00000372195 BHMT2Q9H2M3 363 aa25.79■■□□□ 1.72
RAPGEF1-203ENST00000372195 ERBB4Q15303 1308 aa25.79■■□□□ 1.72
RAPGEF1-203ENST00000372195 USP17L5A8MUK1 530 aa25.79■■□□□ 1.72
RAPGEF1-203ENST00000372195 WDR11Q9BZH6 1224 aa25.79■■□□□ 1.72
RAPGEF1-203ENST00000372195 MLXIPLQ9NP71 852 aa25.79■■□□□ 1.72
RAPGEF1-203ENST00000372195 MGEA5O60502 916 aa25.79■■□□□ 1.72
RAPGEF1-203ENST00000372195 SRGAP2BP0DMP2 458 aa25.79■■□□□ 1.72
RAPGEF1-203ENST00000372195 SSTR3P32745 418 aaPredicted RBP25.79■■□□□ 1.72
RAPGEF1-203ENST00000372195 NEK9Q8TD19 979 aa25.79■■□□□ 1.72
RAPGEF1-203ENST00000372195 EIF3CLB5ME19 914 aaKnown RBP25.79■■□□□ 1.72
RAPGEF1-203ENST00000372195 PDCLQ13371 301 aa25.79■■□□□ 1.72
RAPGEF1-203ENST00000372195 NAA30Q147X3 362 aaPredicted RBP25.79■■□□□ 1.72
RAPGEF1-203ENST00000372195 EIF3CQ99613 913 aaKnown RBP25.79■■□□□ 1.72
RAPGEF1-203ENST00000372195 UBN1Q9NPG3 1134 aa25.79■■□□□ 1.72
RAPGEF1-203ENST00000372195 PPP1R12AO14974 1030 aaPredicted RBP25.78■■□□□ 1.72
RAPGEF1-203ENST00000372195 RFX1P22670 979 aa25.78■■□□□ 1.72
RAPGEF1-203ENST00000372195 KANSL2Q9H9L4 492 aa25.78■■□□□ 1.72
RAPGEF1-203ENST00000372195 PFDN6O15212 129 aa25.78■■□□□ 1.72
RAPGEF1-203ENST00000372195 PRPSAP2O60256 369 aa25.78■■□□□ 1.72
RAPGEF1-203ENST00000372195 HLFQ16534 295 aa25.78■■□□□ 1.72
RAPGEF1-203ENST00000372195 KITP10721 976 aa25.78■■□□□ 1.72
RAPGEF1-203ENST00000372195 EPHA10Q5JZY3 1008 aa25.78■■□□□ 1.72
RAPGEF1-203ENST00000372195 PCGF5Q86SE9 256 aa25.78■■□□□ 1.72
RAPGEF1-203ENST00000372195 GSTA4O15217 222 aa25.78■■□□□ 1.72
RAPGEF1-203ENST00000372195 HIBCHQ6NVY1 386 aaPredicted RBP25.78■■□□□ 1.72
RAPGEF1-203ENST00000372195 SYNE4Q8N205 404 aa25.78■■□□□ 1.72
RAPGEF1-203ENST00000372195 TMEM260Q9NX78 707 aa25.78■■□□□ 1.72
RAPGEF1-203ENST00000372195 IQCB1Q15051 598 aa25.78■■□□□ 1.72
RAPGEF1-203ENST00000372195 SNX24Q9Y343 169 aa25.78■■□□□ 1.72
RAPGEF1-203ENST00000372195 ZNF521Q96K83 1311 aa25.78■■□□□ 1.72
RAPGEF1-203ENST00000372195 A0A087WUV0 522 aaPredicted RBP25.77■■□□□ 1.72
RAPGEF1-203ENST00000372195 GCFC2P16383 781 aaKnown RBP25.77■■□□□ 1.72
RAPGEF1-203ENST00000372195 ARL4AP40617 200 aa25.77■■□□□ 1.72
RAPGEF1-203ENST00000372195 GPR162Q16538 588 aa25.77■■□□□ 1.72
RAPGEF1-203ENST00000372195 HABP4Q5JVS0 413 aaKnown RBP25.77■■□□□ 1.72
RAPGEF1-203ENST00000372195 NLRP4Q96MN2 994 aa25.77■■□□□ 1.72
RAPGEF1-203ENST00000372195 MRPL47Q9HD33 250 aaKnown RBP25.77■■□□□ 1.72
RAPGEF1-203ENST00000372195 EIF4E1BA6NMX2 242 aaKnown RBP25.77■■□□□ 1.72
RAPGEF1-203ENST00000372195 GUCY2CP25092 1073 aa25.77■■□□□ 1.72
RAPGEF1-203ENST00000372195 CDC26Q8NHZ8 85 aa25.77■■□□□ 1.72
RAPGEF1-203ENST00000372195 ABHD10Q9NUJ1 306 aa25.77■■□□□ 1.72
RAPGEF1-203ENST00000372195 SLMAPQ14BN4 828 aa25.77■■□□□ 1.72
RAPGEF1-203ENST00000372195 ANKRD20A4Q4UJ75 823 aa25.77■■□□□ 1.72
RAPGEF1-203ENST00000372195 ANKRD20A8PQ5CZ79 823 aa25.77■■□□□ 1.72
RAPGEF1-203ENST00000372195 ANKRD20A2Q5SQ80 823 aa25.77■■□□□ 1.72
RAPGEF1-203ENST00000372195 ANKRD20A1Q5TYW2 823 aa25.77■■□□□ 1.72
RAPGEF1-203ENST00000372195 NVLO15381 856 aaKnown RBP25.77■■□□□ 1.72
RAPGEF1-203ENST00000372195 HDAC6Q9UBN7 1215 aa25.77■■□□□ 1.72
RAPGEF1-203ENST00000372195 TLK1Q9UKI8 766 aa25.77■■□□□ 1.72
RAPGEF1-203ENST00000372195 PNMA6FA0A0J9YX94 578 aa25.77■■□□□ 1.72
RAPGEF1-203ENST00000372195 APOEP02649 317 aa25.77■■□□□ 1.72
RAPGEF1-203ENST00000372195 CCDC151A5D8V7 595 aa25.76■■□□□ 1.71
RAPGEF1-203ENST00000372195 SPDYE2BA6NHP3 402 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms