RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 SWSAP1Q6NVH7 229 aa17.94■□□□□ 0.46
PFDN4-201ENST00000371419 PLPPR4Q7Z2D5 763 aa17.94■□□□□ 0.46
PFDN4-201ENST00000371419 ANKRD33Q7Z3H0 272 aa17.94■□□□□ 0.46
PFDN4-201ENST00000371419 C7orf31Q8N865 590 aa17.94■□□□□ 0.46
PFDN4-201ENST00000371419 C4orf32Q8N8J7 132 aa17.94■□□□□ 0.46
PFDN4-201ENST00000371419 DPF3Q92784 378 aa17.94■□□□□ 0.46
PFDN4-201ENST00000371419 TTC12Q9H892 705 aaPredicted RBP17.94■□□□□ 0.46
PFDN4-201ENST00000371419 ZNF302Q9NR11 478 aa17.94■□□□□ 0.46
PFDN4-201ENST00000371419 GOLGA6L22H0YM25 854 aa17.93■□□□□ 0.46
PFDN4-201ENST00000371419 LAD1O00515 517 aa17.93■□□□□ 0.46
PFDN4-201ENST00000371419 EVI5O60447 810 aa17.93■□□□□ 0.46
PFDN4-201ENST00000371419 PQBP1O60828 265 aaKnown RBP17.93■□□□□ 0.46
PFDN4-201ENST00000371419 SLC26A2P50443 739 aa17.93■□□□□ 0.46
PFDN4-201ENST00000371419 TLE2Q04725 743 aa17.93■□□□□ 0.46
PFDN4-201ENST00000371419 SESTD1Q86VW0 696 aa17.93■□□□□ 0.46
PFDN4-201ENST00000371419 CCDC60Q8IWA6 550 aaPredicted RBP17.93■□□□□ 0.46
PFDN4-201ENST00000371419 AFAP1L1Q8TED9 768 aa17.93■□□□□ 0.46
PFDN4-201ENST00000371419 TOX2Q96NM4 488 aa17.93■□□□□ 0.46
PFDN4-201ENST00000371419 DCDC2CA8MYV0 355 aa17.92■□□□□ 0.46
PFDN4-201ENST00000371419 SPIRE1Q08AE8 756 aa17.92■□□□□ 0.46
PFDN4-201ENST00000371419 PDXDC2PQ6P474 469 aa17.92■□□□□ 0.46
PFDN4-201ENST00000371419 PPP1R13LQ8WUF5 828 aa17.92■□□□□ 0.46
PFDN4-201ENST00000371419 RNPEPQ9H4A4 650 aa17.92■□□□□ 0.46
PFDN4-201ENST00000371419 HDAC6Q9UBN7 1215 aa17.92■□□□□ 0.46
PFDN4-201ENST00000371419 GABBR1Q9UBS5 961 aa17.92■□□□□ 0.46
PFDN4-201ENST00000371419 EML1O00423 815 aa17.91■□□□□ 0.46
PFDN4-201ENST00000371419 TLR3O15455 904 aaKnown RBP17.91■□□□□ 0.46
PFDN4-201ENST00000371419 F13A1P00488 732 aa17.91■□□□□ 0.46
PFDN4-201ENST00000371419 MARK3P27448 753 aa17.91■□□□□ 0.46
PFDN4-201ENST00000371419 PKP1Q13835 747 aa17.91■□□□□ 0.46
PFDN4-201ENST00000371419 FOXD4L5Q5VV16 416 aaPredicted RBP17.91■□□□□ 0.46
PFDN4-201ENST00000371419 NCAPH2Q6IBW4 605 aa17.91■□□□□ 0.46
PFDN4-201ENST00000371419 FAM173BQ6P4H8 233 aa17.91■□□□□ 0.46
PFDN4-201ENST00000371419 FAM126BQ8IXS8 530 aa17.91■□□□□ 0.46
PFDN4-201ENST00000371419 FOXD4L4Q8WXT5 416 aaPredicted RBP17.91■□□□□ 0.46
PFDN4-201ENST00000371419 MAFBQ9Y5Q3 323 aaPredicted RBP17.91■□□□□ 0.46
PFDN4-201ENST00000371419 ALPK3Q96L96 1907 aa17.91■□□□□ 0.46
PFDN4-201ENST00000371419 BMP15O95972 392 aa17.9■□□□□ 0.46
PFDN4-201ENST00000371419 SMIM10L2AP0DMW4 78 aa17.9■□□□□ 0.46
PFDN4-201ENST00000371419 SMIM10L2BP0DMW5 78 aa17.9■□□□□ 0.46
PFDN4-201ENST00000371419 PRPHP41219 470 aa17.9■□□□□ 0.46
PFDN4-201ENST00000371419 ATP2C1P98194 919 aaPredicted RBP17.9■□□□□ 0.46
PFDN4-201ENST00000371419 EPHA7Q15375 998 aa17.9■□□□□ 0.46
PFDN4-201ENST00000371419 TMEM266Q2M3C6 531 aa17.9■□□□□ 0.46
PFDN4-201ENST00000371419 C7orf61Q8IZ16 206 aa17.9■□□□□ 0.46
PFDN4-201ENST00000371419 GTF2IRD1Q9UHL9 959 aa17.9■□□□□ 0.46
PFDN4-201ENST00000371419 CEP131Q9UPN4 1083 aa17.9■□□□□ 0.46
PFDN4-201ENST00000371419 IGSF9BQ9UPX0 1349 aa17.9■□□□□ 0.46
PFDN4-201ENST00000371419 TECP42680 631 aa17.89■□□□□ 0.45
PFDN4-201ENST00000371419 FXR2P51116 673 aaKnown RBP eCLIP17.89■□□□□ 0.45
PFDN4-201ENST00000371419 PLCB4Q15147 1175 aa17.89■□□□□ 0.45
PFDN4-201ENST00000371419 SKOR2Q2VWA4 1001 aaPredicted RBP17.89■□□□□ 0.45
PFDN4-201ENST00000371419 ATP6V0A1Q93050 837 aa17.89■□□□□ 0.45
PFDN4-201ENST00000371419 TRPV6Q9H1D0 765 aa17.89■□□□□ 0.45
PFDN4-201ENST00000371419 TRMT13Q9NUP7 481 aaKnown RBP17.89■□□□□ 0.45
PFDN4-201ENST00000371419 TRPC6Q9Y210 931 aa17.89■□□□□ 0.45
PFDN4-201ENST00000371419 NR2E3Q9Y5X4 410 aa17.89■□□□□ 0.45
PFDN4-201ENST00000371419 TNRC18O15417 2968 aaPredicted RBP17.89■□□□□ 0.45
PFDN4-201ENST00000371419 PDE4DIPQ5VU43 2346 aa17.89■□□□□ 0.45
PFDN4-201ENST00000371419 POTEB3A0JP26 581 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 C17orf102A2RUQ5 167 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 B4GALT4O60513 344 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 BRD1O95696 1058 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 CD4P01730 458 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 CLTBP09497 229 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 GNAT1P11488 350 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 HOXD11P31277 338 aaPredicted RBP17.88■□□□□ 0.45
PFDN4-201ENST00000371419 FAAP100Q0VG06 881 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 SF3A1Q15459 793 aaKnown RBP17.88■□□□□ 0.45
PFDN4-201ENST00000371419 GDF6Q6KF10 455 aaPredicted RBP17.88■□□□□ 0.45
PFDN4-201ENST00000371419 POTEBQ6S5H4 581 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 DTHD1Q6ZMT9 781 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 CKAP2LQ8IYA6 745 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 ATP8B4Q8TF62 1192 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 RAB34Q9BZG1 259 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 NRCAMQ92823 1304 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 MYH9P35579 1960 aaKnown RBP17.88■□□□□ 0.45
PFDN4-201ENST00000371419 POTEMA6NI47 508 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 P4HBP07237 508 aaKnown RBP17.88■□□□□ 0.45
PFDN4-201ENST00000371419 ATP4AP20648 1035 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 HOXC8P31273 242 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 QARSP47897 775 aaKnown RBP17.88■□□□□ 0.45
PFDN4-201ENST00000371419 PSMC5P62195 406 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 PPFIA1Q13136 1202 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 GSE1Q14687 1217 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 PTGISQ16647 500 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 UGCGQ16739 394 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 ARL6IP4Q66PJ3 421 aaKnown RBP17.88■□□□□ 0.45
PFDN4-201ENST00000371419 BANK1Q8NDB2 785 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 FAM167AQ96KS9 214 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 ZNF396Q96N95 335 aaPredicted RBP17.88■□□□□ 0.45
PFDN4-201ENST00000371419 SETD4Q9NVD3 440 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 NOD1Q9Y239 953 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 CLIC4Q9Y696 253 aa17.88■□□□□ 0.45
PFDN4-201ENST00000371419 ZNF862O60290 1169 aa17.87■□□□□ 0.45
PFDN4-201ENST00000371419 HBP1O60381 514 aa17.87■□□□□ 0.45
PFDN4-201ENST00000371419 DKC1O60832 514 aaKnown RBP eCLIP17.87■□□□□ 0.45
PFDN4-201ENST00000371419 INSRRP14616 1297 aa17.87■□□□□ 0.45
PFDN4-201ENST00000371419 PDIA5Q14554 519 aa17.87■□□□□ 0.45
PFDN4-201ENST00000371419 NEK9Q8TD19 979 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms