RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 FEM1BQ9UK73 627 aa21.27■■□□□ 1
LMO4-202ENST00000370544 SRGAP2CP0DJJ0 459 aa21.27■■□□□ 1
LMO4-202ENST00000370544 MARK3P27448 753 aa21.27■■□□□ 1
LMO4-202ENST00000370544 PEX3P56589 373 aa21.27■■□□□ 1
LMO4-202ENST00000370544 ARHGEF6Q15052 776 aa21.27■■□□□ 1
LMO4-202ENST00000370544 SPATS2Q86XZ4 545 aaKnown RBP21.27■■□□□ 1
LMO4-202ENST00000370544 OXER1Q8TDS5 423 aa21.27■■□□□ 1
LMO4-202ENST00000370544 MKRN3Q13064 507 aaKnown RBP21.26■□□□□ 0.99
LMO4-202ENST00000370544 C7orf31Q8N865 590 aa21.26■□□□□ 0.99
LMO4-202ENST00000370544 PIGOQ8TEQ8 1089 aa21.26■□□□□ 0.99
LMO4-202ENST00000370544 CEP95Q96GE4 821 aa21.26■□□□□ 0.99
LMO4-202ENST00000370544 RPF1Q9H9Y2 349 aaKnown RBP21.26■□□□□ 0.99
LMO4-202ENST00000370544 BCORL1Q5H9F3 1711 aa21.26■□□□□ 0.99
LMO4-202ENST00000370544 ZBTB24O43167 697 aaPredicted RBP21.26■□□□□ 0.99
LMO4-202ENST00000370544 MFAP3LO75121 409 aa21.26■□□□□ 0.99
LMO4-202ENST00000370544 SPZ1Q9BXG8 430 aa21.26■□□□□ 0.99
LMO4-202ENST00000370544 SRGAP2BP0DMP2 458 aa21.26■□□□□ 0.99
LMO4-202ENST00000370544 PLTPP55058 493 aa21.26■□□□□ 0.99
LMO4-202ENST00000370544 MTMR1Q13613 665 aa21.26■□□□□ 0.99
LMO4-202ENST00000370544 PLCB4Q15147 1175 aa21.26■□□□□ 0.99
LMO4-202ENST00000370544 SLFN12LQ6IEE8 588 aa21.26■□□□□ 0.99
LMO4-202ENST00000370544 ARHGAP42A6NI28 874 aa21.26■□□□□ 0.99
LMO4-202ENST00000370544 K7ERI5 159 aa21.26■□□□□ 0.99
LMO4-202ENST00000370544 RFX1P22670 979 aa21.26■□□□□ 0.99
LMO4-202ENST00000370544 ECE1P42892 770 aa21.26■□□□□ 0.99
LMO4-202ENST00000370544 PRELPP51888 382 aa21.26■□□□□ 0.99
LMO4-202ENST00000370544 LRFN2Q9ULH4 789 aa21.26■□□□□ 0.99
LMO4-202ENST00000370544 UBN2Q6ZU65 1347 aa21.26■□□□□ 0.99
LMO4-202ENST00000370544 GSTA1P08263 222 aa21.26■□□□□ 0.99
LMO4-202ENST00000370544 GSTA2P09210 222 aa21.26■□□□□ 0.99
LMO4-202ENST00000370544 DYNLT1P63172 113 aa21.26■□□□□ 0.99
LMO4-202ENST00000370544 CRB1P82279 1406 aa21.26■□□□□ 0.99
LMO4-202ENST00000370544 EFCC1Q9HA90 598 aa21.26■□□□□ 0.99
LMO4-202ENST00000370544 PNPLA6Q8IY17 1366 aa21.25■□□□□ 0.99
LMO4-202ENST00000370544 USP17L10C9JJH3 530 aa21.25■□□□□ 0.99
LMO4-202ENST00000370544 HSPA6P17066 643 aa21.25■□□□□ 0.99
LMO4-202ENST00000370544 CYP27A1Q02318 531 aa21.25■□□□□ 0.99
LMO4-202ENST00000370544 OR6B2Q6IFH4 312 aa21.25■□□□□ 0.99
LMO4-202ENST00000370544 SLC10A4Q96EP9 437 aa21.25■□□□□ 0.99
LMO4-202ENST00000370544 ZNF233A6NK53 670 aa21.25■□□□□ 0.99
LMO4-202ENST00000370544 GPSM2P81274 684 aa21.25■□□□□ 0.99
LMO4-202ENST00000370544 RCSD1Q6JBY9 416 aa21.25■□□□□ 0.99
LMO4-202ENST00000370544 SCARA5Q6ZMJ2 495 aa21.25■□□□□ 0.99
LMO4-202ENST00000370544 KSR1Q8IVT5 923 aa21.25■□□□□ 0.99
LMO4-202ENST00000370544 ABCA6Q8N139 1617 aa21.25■□□□□ 0.99
LMO4-202ENST00000370544 TXNDC9O14530 226 aa21.25■□□□□ 0.99
LMO4-202ENST00000370544 CASQ2O14958 399 aaPredicted RBP21.25■□□□□ 0.99
LMO4-202ENST00000370544 CDC27P30260 824 aa21.25■□□□□ 0.99
LMO4-202ENST00000370544 ARL4AP40617 200 aa21.25■□□□□ 0.99
LMO4-202ENST00000370544 RAD54LQ92698 747 aa21.25■□□□□ 0.99
LMO4-202ENST00000370544 ANAPC5Q9UJX4 755 aa21.25■□□□□ 0.99
LMO4-202ENST00000370544 ACTN1P12814 892 aa21.25■□□□□ 0.99
LMO4-202ENST00000370544 PDE1BQ01064 536 aa21.25■□□□□ 0.99
LMO4-202ENST00000370544 KCTD6Q8NC69 237 aa21.25■□□□□ 0.99
LMO4-202ENST00000370544 NLRP4Q96MN2 994 aa21.25■□□□□ 0.99
LMO4-202ENST00000370544 GOLPH3LQ9H4A5 285 aa21.25■□□□□ 0.99
LMO4-202ENST00000370544 PNMA3Q9UL41 463 aa21.25■□□□□ 0.99
LMO4-202ENST00000370544 FAM196BA6NMK8 535 aa21.24■□□□□ 0.99
LMO4-202ENST00000370544 USP17L15C9J2P7 530 aa21.24■□□□□ 0.99
LMO4-202ENST00000370544 USP17L13C9JLJ4 530 aa21.24■□□□□ 0.99
LMO4-202ENST00000370544 USP17L11C9JVI0 530 aa21.24■□□□□ 0.99
LMO4-202ENST00000370544 USP17L18D6R9N7 530 aa21.24■□□□□ 0.99
LMO4-202ENST00000370544 USP17L22D6RA61 530 aa21.24■□□□□ 0.99
LMO4-202ENST00000370544 USP17L17D6RBQ6 530 aa21.24■□□□□ 0.99
LMO4-202ENST00000370544 USP17L19D6RCP7 530 aa21.24■□□□□ 0.99
LMO4-202ENST00000370544 USP17L20D6RJB6 530 aa21.24■□□□□ 0.99
LMO4-202ENST00000370544 RNASELQ05823 741 aaKnown RBP21.24■□□□□ 0.99
LMO4-202ENST00000370544 USP17L24Q0WX57 530 aa21.24■□□□□ 0.99
LMO4-202ENST00000370544 RC3H1Q5TC82 1133 aaKnown RBP21.24■□□□□ 0.99
LMO4-202ENST00000370544 USP17L6PQ6QN14 398 aa21.24■□□□□ 0.99
LMO4-202ENST00000370544 BBS5Q8N3I7 341 aa21.24■□□□□ 0.99
LMO4-202ENST00000370544 CCNYQ8ND76 341 aa21.24■□□□□ 0.99
LMO4-202ENST00000370544 ATP8A1Q9Y2Q0 1164 aa21.24■□□□□ 0.99
LMO4-202ENST00000370544 CAPN7Q9Y6W3 813 aa21.24■□□□□ 0.99
LMO4-202ENST00000370544 ATP8B1O43520 1251 aa21.24■□□□□ 0.99
LMO4-202ENST00000370544 TTC19Q6DKK2 380 aaPredicted RBP21.24■□□□□ 0.99
LMO4-202ENST00000370544 RAVER2Q9HCJ3 691 aaKnown RBP21.24■□□□□ 0.99
LMO4-202ENST00000370544 GSG1L2A8MUP6 293 aa21.24■□□□□ 0.99
LMO4-202ENST00000370544 MUM1L1Q5H9M0 696 aa21.24■□□□□ 0.99
LMO4-202ENST00000370544 BANK1Q8NDB2 785 aa21.24■□□□□ 0.99
LMO4-202ENST00000370544 IL9RQ01113 521 aa21.23■□□□□ 0.99
LMO4-202ENST00000370544 C4orf50Q6ZRC1 276 aa21.23■□□□□ 0.99
LMO4-202ENST00000370544 HEXIM2Q96MH2 286 aaKnown RBP21.23■□□□□ 0.99
LMO4-202ENST00000370544 RMDN3Q96TC7 470 aa21.23■□□□□ 0.99
LMO4-202ENST00000370544 LRRC4Q9HBW1 653 aa21.23■□□□□ 0.99
LMO4-202ENST00000370544 GOLGA8CPA6NN73 597 aa21.23■□□□□ 0.99
LMO4-202ENST00000370544 MAP3K21Q5TCX8 1036 aa21.23■□□□□ 0.99
LMO4-202ENST00000370544 TCP11Q8WWU5 503 aa21.23■□□□□ 0.99
LMO4-202ENST00000370544 ATP6V0A4Q9HBG4 840 aa21.23■□□□□ 0.99
LMO4-202ENST00000370544 INTS9Q9NV88 658 aaKnown RBP21.23■□□□□ 0.99
LMO4-202ENST00000370544 CPP00450 1065 aa21.23■□□□□ 0.99
LMO4-202ENST00000370544 CLNS1AP54105 237 aaKnown RBP21.23■□□□□ 0.99
LMO4-202ENST00000370544 LLGL1Q15334 1064 aa21.23■□□□□ 0.99
LMO4-202ENST00000370544 SLC27A3Q5K4L6 730 aa21.23■□□□□ 0.99
LMO4-202ENST00000370544 CALN1Q9BXU9 219 aa21.23■□□□□ 0.99
LMO4-202ENST00000370544 DARS2Q6PI48 645 aaKnown RBP21.23■□□□□ 0.99
LMO4-202ENST00000370544 SFR1Q86XK3 245 aa21.23■□□□□ 0.99
LMO4-202ENST00000370544 NBPF26B4DH59 902 aa21.22■□□□□ 0.99
LMO4-202ENST00000370544 NBPF10Q6P3W6 841 aaKnown RBP21.22■□□□□ 0.99
LMO4-202ENST00000370544 NBPF15Q8N660 670 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms