RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 CD52P31358 61 aa17.78■□□□□ 0.44
SSR4-204ENST00000370087 TCF7P36402 384 aaPredicted RBP17.78■□□□□ 0.44
SSR4-204ENST00000370087 ZXDAP98168 799 aa17.78■□□□□ 0.44
SSR4-204ENST00000370087 RBM10P98175 930 aaKnown RBP17.78■□□□□ 0.44
SSR4-204ENST00000370087 PPFIA1Q13136 1202 aa17.78■□□□□ 0.44
SSR4-204ENST00000370087 GRIK4Q16099 956 aa17.78■□□□□ 0.44
SSR4-204ENST00000370087 PAN2Q504Q3 1202 aaKnown RBP17.78■□□□□ 0.44
SSR4-204ENST00000370087 PBXIP1Q96AQ6 731 aa17.78■□□□□ 0.44
SSR4-204ENST00000370087 PLVAPQ9BX97 442 aa17.78■□□□□ 0.44
SSR4-204ENST00000370087 CNNM2Q9H8M5 875 aa17.78■□□□□ 0.44
SSR4-204ENST00000370087 DIAPH3Q9NSV4 1193 aa17.78■□□□□ 0.44
SSR4-204ENST00000370087 FAM86C1Q9NVL1 165 aa17.78■□□□□ 0.44
SSR4-204ENST00000370087 DMDP11532 3685 aa17.77■□□□□ 0.44
SSR4-204ENST00000370087 PNMA6FA0A0J9YX94 578 aa17.77■□□□□ 0.44
SSR4-204ENST00000370087 MBLAC1A4D2B0 266 aaPredicted RBP17.77■□□□□ 0.44
SSR4-204ENST00000370087 ATP9AO75110 1047 aa17.77■□□□□ 0.44
SSR4-204ENST00000370087 STAM2O75886 525 aa17.77■□□□□ 0.44
SSR4-204ENST00000370087 NRIP1P48552 1158 aa17.77■□□□□ 0.44
SSR4-204ENST00000370087 PTPN5P54829 565 aa17.77■□□□□ 0.44
SSR4-204ENST00000370087 VCPP55072 806 aaKnown RBP17.77■□□□□ 0.44
SSR4-204ENST00000370087 COASYQ13057 564 aa17.77■□□□□ 0.44
SSR4-204ENST00000370087 B4GALNT3Q6L9W6 998 aa17.77■□□□□ 0.44
SSR4-204ENST00000370087 TAF2Q6P1X5 1199 aa17.77■□□□□ 0.44
SSR4-204ENST00000370087 USP17L6PQ6QN14 398 aa17.77■□□□□ 0.44
SSR4-204ENST00000370087 TSHZ1Q6ZSZ6 1077 aa17.77■□□□□ 0.44
SSR4-204ENST00000370087 EFHBQ8N7U6 833 aa17.77■□□□□ 0.44
SSR4-204ENST00000370087 KLHL23Q8NBE8 558 aa17.77■□□□□ 0.44
SSR4-204ENST00000370087 P2RX5Q93086 422 aa17.77■□□□□ 0.44
SSR4-204ENST00000370087 TUBE1Q9UJT0 475 aa17.77■□□□□ 0.44
SSR4-204ENST00000370087 USP15Q9Y4E8 981 aaPredicted RBP17.77■□□□□ 0.44
SSR4-204ENST00000370087 TAF6LQ9Y6J9 622 aa17.77■□□□□ 0.44
SSR4-204ENST00000370087 GSTTP1A0A1W2PQM5 241 aa17.76■□□□□ 0.43
SSR4-204ENST00000370087 KCNA2P16389 499 aa17.76■□□□□ 0.43
SSR4-204ENST00000370087 CBX2Q14781 532 aaPredicted RBP17.76■□□□□ 0.43
SSR4-204ENST00000370087 PCNX4Q63HM2 1172 aa17.76■□□□□ 0.43
SSR4-204ENST00000370087 RBM23Q86U06 439 aaKnown RBP17.76■□□□□ 0.43
SSR4-204ENST00000370087 CMTR2Q8IYT2 770 aaKnown RBP17.76■□□□□ 0.43
SSR4-204ENST00000370087 VN1R2Q8NFZ6 395 aa17.76■□□□□ 0.43
SSR4-204ENST00000370087 POF1BQ8WVV4 589 aa17.76■□□□□ 0.43
SSR4-204ENST00000370087 MRPS6P82932 125 aaKnown RBP17.75■□□□□ 0.43
SSR4-204ENST00000370087 TROAPQ12815 778 aa17.75■□□□□ 0.43
SSR4-204ENST00000370087 SENP7Q9BQF6 1050 aa17.75■□□□□ 0.43
SSR4-204ENST00000370087 FAM49AQ9H0Q0 323 aaPredicted RBP17.75■□□□□ 0.43
SSR4-204ENST00000370087 OSBPL3Q9H4L5 887 aa17.75■□□□□ 0.43
SSR4-204ENST00000370087 ZDBF2Q9HCK1 2354 aa17.74■□□□□ 0.43
SSR4-204ENST00000370087 MEIS2O14770 477 aa17.74■□□□□ 0.43
SSR4-204ENST00000370087 IGBP1P78318 339 aa17.74■□□□□ 0.43
SSR4-204ENST00000370087 TMEM62Q0P6H9 643 aa17.74■□□□□ 0.43
SSR4-204ENST00000370087 NPAS4Q8IUM7 802 aa17.74■□□□□ 0.43
SSR4-204ENST00000370087 SMC5Q8IY18 1101 aa17.74■□□□□ 0.43
SSR4-204ENST00000370087 FBXL6Q8N531 539 aa17.74■□□□□ 0.43
SSR4-204ENST00000370087 ASIC4Q96FT7 647 aa17.74■□□□□ 0.43
SSR4-204ENST00000370087 PKD2L1Q9P0L9 805 aa17.74■□□□□ 0.43
SSR4-204ENST00000370087 HCSTQ9UBK5 93 aa17.74■□□□□ 0.43
SSR4-204ENST00000370087 ITGB5P18084 799 aa17.73■□□□□ 0.43
SSR4-204ENST00000370087 RSPH3Q86UC2 560 aa17.73■□□□□ 0.43
SSR4-204ENST00000370087 SUGP1Q8IWZ8 645 aaKnown RBP17.73■□□□□ 0.43
SSR4-204ENST00000370087 TRAPPC12Q8WVT3 735 aa17.73■□□□□ 0.43
SSR4-204ENST00000370087 PCYT2Q99447 389 aa17.73■□□□□ 0.43
SSR4-204ENST00000370087 TMX1Q9H3N1 280 aa17.73■□□□□ 0.43
SSR4-204ENST00000370087 ERAP1Q9NZ08 941 aa17.73■□□□□ 0.43
SSR4-204ENST00000370087 IFIT3O14879 490 aaKnown RBP17.72■□□□□ 0.43
SSR4-204ENST00000370087 PER2O15055 1255 aa17.72■□□□□ 0.43
SSR4-204ENST00000370087 ST18O60284 1047 aa17.72■□□□□ 0.43
SSR4-204ENST00000370087 IBSPP21815 317 aaPredicted RBP17.72■□□□□ 0.43
SSR4-204ENST00000370087 TRAF1Q13077 416 aa17.72■□□□□ 0.43
SSR4-204ENST00000370087 NAALADL2Q58DX5 795 aa17.72■□□□□ 0.43
SSR4-204ENST00000370087 CHD1LQ86WJ1 897 aa17.72■□□□□ 0.43
SSR4-204ENST00000370087 SMARCC2Q8TAQ2 1214 aa17.72■□□□□ 0.43
SSR4-204ENST00000370087 RPGRIP1Q96KN7 1286 aa17.72■□□□□ 0.43
SSR4-204ENST00000370087 PADI3Q9ULW8 664 aa17.72■□□□□ 0.43
SSR4-204ENST00000370087 PIK3CDO00329 1044 aa17.71■□□□□ 0.43
SSR4-204ENST00000370087 PPFIA3O75145 1194 aa17.71■□□□□ 0.43
SSR4-204ENST00000370087 CYP21A2P08686 494 aa17.71■□□□□ 0.43
SSR4-204ENST00000370087 SIGLEC14Q08ET2 396 aa17.71■□□□□ 0.43
SSR4-204ENST00000370087 NLRX1Q86UT6 975 aa17.71■□□□□ 0.43
SSR4-204ENST00000370087 SEPT1Q8WYJ6 367 aa17.71■□□□□ 0.43
SSR4-204ENST00000370087 SUSD6Q92537 303 aa17.71■□□□□ 0.43
SSR4-204ENST00000370087 GLG1Q92896 1179 aa17.71■□□□□ 0.43
SSR4-204ENST00000370087 PPP2R3CQ969Q6 453 aa17.71■□□□□ 0.43
SSR4-204ENST00000370087 GPRASP2Q96D09 838 aa17.71■□□□□ 0.43
SSR4-204ENST00000370087 MYL10Q9BUA6 226 aa17.71■□□□□ 0.43
SSR4-204ENST00000370087 PHF7Q9BWX1 381 aaPredicted RBP17.71■□□□□ 0.43
SSR4-204ENST00000370087 TRPV2Q9Y5S1 764 aa17.71■□□□□ 0.43
SSR4-204ENST00000370087 HIP1O00291 1037 aa17.7■□□□□ 0.42
SSR4-204ENST00000370087 MGEA5O60502 916 aa17.7■□□□□ 0.42
SSR4-204ENST00000370087 GFRA3O60609 400 aa17.7■□□□□ 0.42
SSR4-204ENST00000370087 PDGFBP01127 241 aaPredicted RBP17.7■□□□□ 0.42
SSR4-204ENST00000370087 IGHDP01880 384 aa17.7■□□□□ 0.42
SSR4-204ENST00000370087 SCG2P13521 617 aa17.7■□□□□ 0.42
SSR4-204ENST00000370087 INSRRP14616 1297 aa17.7■□□□□ 0.42
SSR4-204ENST00000370087 ANTXR2P58335 489 aa17.7■□□□□ 0.42
SSR4-204ENST00000370087 NUCB1Q02818 461 aa17.7■□□□□ 0.42
SSR4-204ENST00000370087 WTAPQ15007 396 aa17.7■□□□□ 0.42
SSR4-204ENST00000370087 TMEM266Q2M3C6 531 aa17.7■□□□□ 0.42
SSR4-204ENST00000370087 XRRA1Q6P2D8 792 aa17.7■□□□□ 0.42
SSR4-204ENST00000370087 ATP8B4Q8TF62 1192 aa17.7■□□□□ 0.42
SSR4-204ENST00000370087 TLE6Q9H808 572 aa17.7■□□□□ 0.42
SSR4-204ENST00000370087 VPS13AQ96RL7 3174 aa17.7■□□□□ 0.42
SSR4-204ENST00000370087 IGSF9BQ9UPX0 1349 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms