RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 RPAINQ86UA6 219 aa11.02□□□□□ -0.65
PRPF38B-203ENST00000370025 TRIM47Q96LD4 638 aa11.02□□□□□ -0.65
PRPF38B-203ENST00000370025 RABGAP1Q9Y3P9 1069 aa11.02□□□□□ -0.65
PRPF38B-203ENST00000370025 ZBED4O75132 1171 aa11.02□□□□□ -0.65
PRPF38B-203ENST00000370025 FDX1P10109 184 aa11.02□□□□□ -0.65
PRPF38B-203ENST00000370025 VCAM1P19320 739 aa11.02□□□□□ -0.65
PRPF38B-203ENST00000370025 ECM1Q16610 540 aa11.02□□□□□ -0.65
PRPF38B-203ENST00000370025 KCNK18Q7Z418 384 aa11.02□□□□□ -0.65
PRPF38B-203ENST00000370025 CEP57Q86XR8 500 aa11.02□□□□□ -0.65
PRPF38B-203ENST00000370025 CPXCR1Q8N123 301 aa11.02□□□□□ -0.65
PRPF38B-203ENST00000370025 ZNF280CQ8ND82 737 aa11.02□□□□□ -0.65
PRPF38B-203ENST00000370025 NOC3LQ8WTT2 800 aaKnown RBP11.02□□□□□ -0.65
PRPF38B-203ENST00000370025 DDX12PQ92771 950 aa11.02□□□□□ -0.65
PRPF38B-203ENST00000370025 ZKSCAN4Q969J2 545 aaPredicted RBP11.02□□□□□ -0.65
PRPF38B-203ENST00000370025 RPAP3Q9H6T3 665 aaPredicted RBP11.02□□□□□ -0.65
PRPF38B-203ENST00000370025 NEBLO76041 1014 aa11.01□□□□□ -0.65
PRPF38B-203ENST00000370025 CCNE1P24864 410 aa11.01□□□□□ -0.65
PRPF38B-203ENST00000370025 STAT3P40763 770 aa11.01□□□□□ -0.65
PRPF38B-203ENST00000370025 BACE1P56817 501 aa11.01□□□□□ -0.65
PRPF38B-203ENST00000370025 SETQ01105 290 aaPredicted RBP11.01□□□□□ -0.65
PRPF38B-203ENST00000370025 STK4Q13043 487 aa11.01□□□□□ -0.65
PRPF38B-203ENST00000370025 PSMD2Q13200 908 aa11.01□□□□□ -0.65
PRPF38B-203ENST00000370025 EMILIN3Q9NT22 766 aa11.01□□□□□ -0.65
PRPF38B-203ENST00000370025 MAGEC2Q9UBF1 373 aaPredicted RBP11.01□□□□□ -0.65
PRPF38B-203ENST00000370025 ADD3Q9UEY8 706 aaKnown RBP11.01□□□□□ -0.65
PRPF38B-203ENST00000370025 LIMA1Q9UHB6 759 aaKnown RBP11.01□□□□□ -0.65
PRPF38B-203ENST00000370025 PPP1R9AQ9ULJ8 1098 aa11.01□□□□□ -0.65
PRPF38B-203ENST00000370025 DOCK1Q14185 1865 aa11.01□□□□□ -0.65
PRPF38B-203ENST00000370025 KCNJ18B7U540 433 aa11.01□□□□□ -0.65
PRPF38B-203ENST00000370025 PTPRAP18433 802 aa11.01□□□□□ -0.65
PRPF38B-203ENST00000370025 ACTN3Q08043 901 aaPredicted RBP11.01□□□□□ -0.65
PRPF38B-203ENST00000370025 KCNJ12Q14500 433 aa11.01□□□□□ -0.65
PRPF38B-203ENST00000370025 COBLL1Q53SF7 1204 aa11.01□□□□□ -0.65
PRPF38B-203ENST00000370025 SLC35F6Q8N357 371 aa11.01□□□□□ -0.65
PRPF38B-203ENST00000370025 P2RX5Q93086 422 aa11.01□□□□□ -0.65
PRPF38B-203ENST00000370025 SLC38A10Q9HBR0 1119 aa11.01□□□□□ -0.65
PRPF38B-203ENST00000370025 ZNF536O15090 1300 aa11.01□□□□□ -0.65
PRPF38B-203ENST00000370025 POTEB3A0JP26 581 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 CTAGE15A4D2H0 777 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 POTECB2RU33 542 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 N4BP3O15049 544 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 ZEB2O60315 1214 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 PLA2G4BP0C869 781 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 CTAGE8P0CG41 777 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 FCER1AP12319 257 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 ALAS1P13196 640 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 TCP11X2Q5H9J9 407 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 POTEBQ6S5H4 581 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 CTAGE6Q86UF2 777 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 CTAGE4Q8IX94 777 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 ACRBPQ8NEB7 543 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 CYP2W1Q8TAV3 490 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 THAP9Q9H5L6 903 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 SLC39A2Q9NP94 309 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 KCND1Q9NSA2 647 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 DONSONQ9NYP3 566 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 TRIM49BA6NDI0 452 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 LRRC10BA6NIK2 292 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 C19orf81C9J6K1 198 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 E9PMD0 336 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 RPA1P27694 616 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 HSD17B4P51659 736 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 SPIRE1Q08AE8 756 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 KRT31Q15323 416 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 RNF187Q5TA31 235 aaPredicted RBP11□□□□□ -0.65
PRPF38B-203ENST00000370025 APTXQ7Z2E3 356 aaKnown RBP11□□□□□ -0.65
PRPF38B-203ENST00000370025 SAMD3Q8N6K7 520 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 FAM71BQ8TC56 605 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 RAVER2Q9HCJ3 691 aaKnown RBP11□□□□□ -0.65
PRPF38B-203ENST00000370025 DNM3Q9UQ16 869 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 ZHX2Q9Y6X8 837 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 IGLV3-22A0A075B6J6 115 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 MED24O75448 989 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 CCDC175P0C221 793 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 HIRAP54198 1017 aaPredicted RBP11□□□□□ -0.65
PRPF38B-203ENST00000370025 UBXN2AP68543 259 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 SF3A3Q12874 501 aaKnown RBP eCLIP11□□□□□ -0.653e-7■□□□□ 9.1
PRPF38B-203ENST00000370025 CEP55Q53EZ4 464 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 KCNV1Q6PIU1 500 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 ACBD3Q9H3P7 528 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 MAP3K20Q9NYL2 800 aaKnown RBP11□□□□□ -0.65
PRPF38B-203ENST00000370025 TFR2Q9UP52 801 aa11□□□□□ -0.65
PRPF38B-203ENST00000370025 SRGAP2O75044 1071 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 SKAP2O75563 359 aaPredicted RBP10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 TUBB4AP04350 444 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 KRT18P05783 430 aaKnown RBP10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 RDXP35241 583 aaKnown RBP10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 COPB1P53618 953 aaKnown RBP10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 TBX2Q13207 712 aaPredicted RBP10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 DGKZQ13574 1117 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 TTI2Q6NXR4 508 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 PPFIBP1Q86W92 1011 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 CATSPER3Q86XQ3 398 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 FAM114A1Q8IWE2 563 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 CCDC65Q8IXS2 484 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 CSGALNACT2Q8N6G5 542 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 KLRG1Q96E93 195 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 RNF181Q9P0P0 153 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 SBF1O95248 1867 aa10.99□□□□□ -0.65
PRPF38B-203ENST00000370025 TEX33O43247 280 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms