RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 CASP8Q14790 479 aa13.39□□□□□ -0.27
HCFC1-202ENST00000369984 TRPV6Q9H1D0 765 aa13.39□□□□□ -0.27
HCFC1-202ENST00000369984 STK32BQ9NY57 414 aa13.39□□□□□ -0.27
HCFC1-202ENST00000369984 CHL1O00533 1208 aa13.39□□□□□ -0.27
HCFC1-202ENST00000369984 ABCD1P33897 745 aa13.39□□□□□ -0.27
HCFC1-202ENST00000369984 SCNN1DP51172 638 aa13.39□□□□□ -0.27
HCFC1-202ENST00000369984 KHDRBS2Q5VWX1 349 aaKnown RBP13.39□□□□□ -0.27
HCFC1-202ENST00000369984 CDCA7Q9BWT1 371 aaPredicted RBP13.39□□□□□ -0.27
HCFC1-202ENST00000369984 HACD3Q9P035 362 aa13.39□□□□□ -0.27
HCFC1-202ENST00000369984 STRIP2Q9ULQ0 834 aa13.39□□□□□ -0.27
HCFC1-202ENST00000369984 IPO5O00410 1097 aaKnown RBP13.39□□□□□ -0.27
HCFC1-202ENST00000369984 GYG1P46976 350 aa13.39□□□□□ -0.27
HCFC1-202ENST00000369984 BLMP54132 1417 aaPredicted RBP13.39□□□□□ -0.27
HCFC1-202ENST00000369984 NOP53Q9NZM5 478 aaKnown RBP13.38□□□□□ -0.27
HCFC1-202ENST00000369984 TRPC5Q9UL62 973 aaPredicted RBP13.38□□□□□ -0.27
HCFC1-202ENST00000369984 E2F6O75461 281 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 FMNL1O95466 1100 aaPredicted RBP13.38□□□□□ -0.27
HCFC1-202ENST00000369984 EXT2Q93063 718 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 PITPNM3Q9BZ71 974 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 TRIM33Q9UPN9 1127 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 A0A0G2JND7 137 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 CLCN6P51797 869 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 MYO1EQ12965 1108 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 NUGGCQ68CJ6 796 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 KCTD1Q719H9 257 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 C7orf31Q8N865 590 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 DHX38Q92620 1227 aaKnown RBP13.38□□□□□ -0.27
HCFC1-202ENST00000369984 PCIF1Q9H4Z3 704 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 DDX28Q9NUL7 540 aaKnown RBP13.38□□□□□ -0.27
HCFC1-202ENST00000369984 L3MBTL1Q9Y468 752 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 KITP10721 976 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 SPARCL1Q14515 664 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 ATP10DQ9P241 1426 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 HSPA6P17066 643 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 FKBP3Q00688 224 aaKnown RBP13.38□□□□□ -0.27
HCFC1-202ENST00000369984 ABCB5Q2M3G0 1257 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 DDX17Q92841 729 aaKnown RBP13.38□□□□□ -0.27
HCFC1-202ENST00000369984 NR1H4Q96RI1 486 aaPredicted RBP13.38□□□□□ -0.27
HCFC1-202ENST00000369984 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.38□□□□□ -0.27
HCFC1-202ENST00000369984 TMEM232C9JQI7 657 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 IKBKBO14920 756 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 TJP3O95049 919 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 MMEP08473 750 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 SPTLC3Q9NUV7 552 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 POLR3EQ9NVU0 708 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 NFU1Q9UMS0 254 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 INPP5FQ9Y2H2 1132 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 PSMC1P62191 440 aaKnown RBP13.38□□□□□ -0.27
HCFC1-202ENST00000369984 DCAF15Q66K64 600 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 C11orf57Q6ZUT1 292 aaPredicted RBP13.38□□□□□ -0.27
HCFC1-202ENST00000369984 EPM2AIP1Q7L775 607 aaPredicted RBP13.38□□□□□ -0.27
HCFC1-202ENST00000369984 DDX42Q86XP3 938 aaKnown RBP eCLIP13.38□□□□□ -0.27
HCFC1-202ENST00000369984 FBXO18Q8NFZ0 1043 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 TDRD7Q8NHU6 1098 aaKnown RBP13.38□□□□□ -0.27
HCFC1-202ENST00000369984 ALKBH8Q96BT7 664 aaKnown RBP13.38□□□□□ -0.27
HCFC1-202ENST00000369984 LMCD1Q9NZU5 365 aa13.38□□□□□ -0.27
HCFC1-202ENST00000369984 A0A1W2PQ27 194 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 A0A1W2PQ64 194 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 A0A1W2PQD8 194 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 HSPA4LO95757 839 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 TAC1P20366 129 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 CA4P22748 312 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 TMEM206Q9H813 350 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 COG4Q9H9E3 785 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 ATP8B3O60423 1300 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 PLEKHG3A1L390 1219 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 ZNF18P17022 549 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 ASPRV1Q53RT3 343 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 INO80B-WBP1J3KQ70 363 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 TTLL1O95922 423 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 BEND6Q5SZJ8 279 aaPredicted RBP13.37□□□□□ -0.27
HCFC1-202ENST00000369984 SLC7A3Q8WY07 619 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 INO80BQ9C086 356 aaPredicted RBP13.37□□□□□ -0.27
HCFC1-202ENST00000369984 PALD1Q9ULE6 856 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 PCDHA5Q9Y5H7 936 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 NDUFA10O95299 355 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 LRRC41Q15345 812 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.37□□□□□ -0.27
HCFC1-202ENST00000369984 WARS2Q9UGM6 360 aaKnown RBP13.37□□□□□ -0.27
HCFC1-202ENST00000369984 PLAAQ9Y263 795 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 A0A1B0GW55 424 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 KRT8P05787 483 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 DUX4L2P0CJ85 424 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 DUX4L3P0CJ86 424 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 DUX4L4P0CJ87 422 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 DUX4L5P0CJ88 424 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 DUX4L6P0CJ89 424 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 DUX4L7P0CJ90 424 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 SYT2Q8N9I0 419 aaPredicted RBP13.37□□□□□ -0.27
HCFC1-202ENST00000369984 SNX19Q92543 992 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 DUX4Q9UBX2 424 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 DBNLQ9UJU6 430 aaKnown RBP13.37□□□□□ -0.27
HCFC1-202ENST00000369984 MID2Q9UJV3 735 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 EIF4A3P38919 411 aaKnown RBP13.37□□□□□ -0.27
HCFC1-202ENST00000369984 BTDP43251 543 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 TRAPPC10P48553 1259 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 GRAMD1CQ8IYS0 662 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 ZBTB38Q8NAP3 1195 aaPredicted RBP13.37□□□□□ -0.27
HCFC1-202ENST00000369984 THOC1Q96FV9 657 aaKnown RBP13.37□□□□□ -0.27
HCFC1-202ENST00000369984 TMEM60Q9H2L4 133 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms