RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 SMARCE1Q969G3 411 aa13.76□□□□□ -0.21
TUBE1-202ENST00000368662 PDGFCQ9NRA1 345 aa13.76□□□□□ -0.21
TUBE1-202ENST00000368662 TUBE1Q9UJT0 475 aa13.76□□□□□ -0.21
TUBE1-202ENST00000368662 ZHX1Q9UKY1 873 aaPredicted RBP13.76□□□□□ -0.21
TUBE1-202ENST00000368662 NOP56O00567 594 aaKnown RBP13.75□□□□□ -0.21
TUBE1-202ENST00000368662 EYA4O95677 639 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 GH1P01241 217 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 IGHA2P01877 340 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 SUPT20HL2P0C7V6 817 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 PLA2G4BP0C869 781 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 DPYDQ12882 1025 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 C4orf19Q8IY42 314 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 BANK1Q8NDB2 785 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 SPATA20Q8TB22 786 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 SEPT1Q8WYJ6 367 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 EMID1Q96A84 441 aaPredicted RBP13.75□□□□□ -0.21
TUBE1-202ENST00000368662 GSDMAQ96QA5 445 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 BMP2KQ9NSY1 1161 aaPredicted RBP13.75□□□□□ -0.21
TUBE1-202ENST00000368662 FLRT1Q9NZU1 646 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 E9PMD0 336 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 FOXN1O15353 648 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 XRCC6P12956 609 aaKnown RBP eCLIP13.75□□□□□ -0.21
TUBE1-202ENST00000368662 SP4Q02446 784 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 PRKCZQ05513 592 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 MCM6Q14566 821 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 CCL14Q16627 93 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 DUSP28Q4G0W2 176 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 MFSD14CQ5VZR4 134 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 KCNK18Q7Z418 384 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 GRAMD1CQ8IYS0 662 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 LRRC15Q8TF66 581 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 SPATA33Q96N06 139 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 MTRQ99707 1265 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 C7orf25Q9BPX7 421 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 BCAS3Q9H6U6 928 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 SRRDQ9UH36 339 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 PCDHA5Q9Y5H7 936 aa13.75□□□□□ -0.21
TUBE1-202ENST00000368662 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.74□□□□□ -0.21
TUBE1-202ENST00000368662 BACH1O14867 736 aa13.74□□□□□ -0.21
TUBE1-202ENST00000368662 ADCYAP1R1P41586 468 aa13.74□□□□□ -0.21
TUBE1-202ENST00000368662 PRMT2P55345 433 aa13.74□□□□□ -0.21
TUBE1-202ENST00000368662 CCDC144BQ3MJ40 725 aa13.74□□□□□ -0.21
TUBE1-202ENST00000368662 FAM160B1Q5W0V3 765 aa13.74□□□□□ -0.21
TUBE1-202ENST00000368662 CNNM4Q6P4Q7 775 aa13.74□□□□□ -0.21
TUBE1-202ENST00000368662 SYT2Q8N9I0 419 aaPredicted RBP13.74□□□□□ -0.21
TUBE1-202ENST00000368662 TRIML1Q8N9V2 468 aa13.74□□□□□ -0.21
TUBE1-202ENST00000368662 CD99L2Q8TCZ2 262 aa13.74□□□□□ -0.21
TUBE1-202ENST00000368662 TRIM9Q9C026 710 aa13.74□□□□□ -0.21
TUBE1-202ENST00000368662 RMND1Q9NWS8 449 aa13.74□□□□□ -0.21
TUBE1-202ENST00000368662 KCND2Q9NZV8 630 aa13.74□□□□□ -0.21
TUBE1-202ENST00000368662 CASP8AP2Q9UKL3 1982 aa13.74□□□□□ -0.21
TUBE1-202ENST00000368662 IGKV6D-21A0A0A0MT36 114 aa13.73□□□□□ -0.21
TUBE1-202ENST00000368662 CAVIN2O95810 425 aa13.73□□□□□ -0.21
TUBE1-202ENST00000368662 PRR29P0C7W0 189 aa13.73□□□□□ -0.21
TUBE1-202ENST00000368662 CYP2C19P33261 490 aa13.73□□□□□ -0.21
TUBE1-202ENST00000368662 SARSP49591 514 aaKnown RBP13.73□□□□□ -0.21
TUBE1-202ENST00000368662 STX1AQ16623 288 aa13.73□□□□□ -0.21
TUBE1-202ENST00000368662 SWSAP1Q6NVH7 229 aa13.73□□□□□ -0.21
TUBE1-202ENST00000368662 STAMQ92783 540 aa13.73□□□□□ -0.21
TUBE1-202ENST00000368662 CCDC47Q96A33 483 aaKnown RBP13.73□□□□□ -0.21
TUBE1-202ENST00000368662 GTPBP4Q9BZE4 634 aaKnown RBP13.73□□□□□ -0.21
TUBE1-202ENST00000368662 TSPY26PQ9H489 355 aa13.73□□□□□ -0.21
TUBE1-202ENST00000368662 AZI2Q9H6S1 392 aa13.73□□□□□ -0.21
TUBE1-202ENST00000368662 ZNF302Q9NR11 478 aa13.73□□□□□ -0.21
TUBE1-202ENST00000368662 GABBR1Q9UBS5 961 aa13.73□□□□□ -0.21
TUBE1-202ENST00000368662 DBR1Q9UK59 544 aaKnown RBP13.73□□□□□ -0.21
TUBE1-202ENST00000368662 GABRQQ9UN88 632 aa13.73□□□□□ -0.21
TUBE1-202ENST00000368662 IGSF9BQ9UPX0 1349 aa13.73□□□□□ -0.21
TUBE1-202ENST00000368662 SSBP05455 408 aaKnown RBP eCLIP13.73□□□□□ -0.21
TUBE1-202ENST00000368662 ZNF865P0CJ78 1059 aaPredicted RBP13.73□□□□□ -0.21
TUBE1-202ENST00000368662 YWHABP31946 246 aaKnown RBP13.73□□□□□ -0.21
TUBE1-202ENST00000368662 SLC12A3P55017 1021 aa13.73□□□□□ -0.21
TUBE1-202ENST00000368662 PSMC6P62333 389 aa13.73□□□□□ -0.21
TUBE1-202ENST00000368662 TNFAIP2Q03169 654 aa13.73□□□□□ -0.21
TUBE1-202ENST00000368662 TYRO3Q06418 890 aa13.73□□□□□ -0.21
TUBE1-202ENST00000368662 CUL4BQ13620 913 aa13.73□□□□□ -0.21
TUBE1-202ENST00000368662 DHX8Q14562 1220 aaKnown RBP13.73□□□□□ -0.21
TUBE1-202ENST00000368662 OTUD6AQ7L8S5 288 aa13.73□□□□□ -0.21
TUBE1-202ENST00000368662 CCDC60Q8IWA6 550 aaPredicted RBP13.73□□□□□ -0.21
TUBE1-202ENST00000368662 PPTC7Q8NI37 304 aa13.73□□□□□ -0.21
TUBE1-202ENST00000368662 AFAP1L1Q8TED9 768 aa13.73□□□□□ -0.21
TUBE1-202ENST00000368662 ZNF296Q8WUU4 475 aaPredicted RBP13.73□□□□□ -0.21
TUBE1-202ENST00000368662 ERCC4Q92889 916 aaPredicted RBP13.73□□□□□ -0.21
TUBE1-202ENST00000368662 CCDC43Q96MW1 224 aaKnown RBP13.73□□□□□ -0.21
TUBE1-202ENST00000368662 GPR20Q99678 358 aa13.73□□□□□ -0.21
TUBE1-202ENST00000368662 FUCA2Q9BTY2 467 aa13.73□□□□□ -0.21
TUBE1-202ENST00000368662 BHMT2Q9H2M3 363 aa13.73□□□□□ -0.21
TUBE1-202ENST00000368662 ANO10Q9NW15 660 aa13.73□□□□□ -0.21
TUBE1-202ENST00000368662 WRAP73Q9P2S5 460 aaPredicted RBP13.73□□□□□ -0.21
TUBE1-202ENST00000368662 MAFBQ9Y5Q3 323 aaPredicted RBP13.73□□□□□ -0.21
TUBE1-202ENST00000368662 GSTTP1A0A1W2PQM5 241 aa13.72□□□□□ -0.21
TUBE1-202ENST00000368662 SORBS3O60504 671 aa13.72□□□□□ -0.21
TUBE1-202ENST00000368662 TCF7P36402 384 aaPredicted RBP13.72□□□□□ -0.21
TUBE1-202ENST00000368662 ARHGAP1Q07960 439 aa13.72□□□□□ -0.21
TUBE1-202ENST00000368662 HSDL1Q3SXM5 330 aa13.72□□□□□ -0.21
TUBE1-202ENST00000368662 PIGOQ8TEQ8 1089 aa13.72□□□□□ -0.21
TUBE1-202ENST00000368662 TRIB2Q92519 343 aa13.72□□□□□ -0.21
TUBE1-202ENST00000368662 BLZF1Q9H2G9 400 aa13.72□□□□□ -0.21
TUBE1-202ENST00000368662 ANKEF1Q9NU02 776 aa13.72□□□□□ -0.21
TUBE1-202ENST00000368662 FAM184BQ9ULE4 1060 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms