RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 ECHDC1Q9NTX5 307 aa7.57□□□□□ -1.2
ECHDC1-202ENST00000368289 SOX13Q9UN79 622 aa7.57□□□□□ -1.2
ECHDC1-202ENST00000368289 MTCH2Q9Y6C9 303 aa7.57□□□□□ -1.2
ECHDC1-202ENST00000368289 H3BRJ5 948 aa7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 ZNF500O60304 480 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 ZNF16P17020 682 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 ZKSCAN1P17029 563 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 POU3F3P20264 500 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 PDCP20941 246 aa7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 GRIA4P48058 902 aa7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 TLE2Q04725 743 aa7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 TNFAIP1Q13829 316 aa7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 FAM110CQ1W6H9 321 aa7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 RPS26P11Q5JNZ5 115 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 TREML2Q5T2D2 321 aa7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 GAS2L3Q86XJ1 694 aa7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 ANKRD18AQ8IVF6 992 aa7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 FAM178BQ8IXR5 827 aa7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 GLIS3Q8NEA6 775 aa7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 HERVK_113Q902F9 699 aa7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 OSBPL7Q9BZF2 842 aa7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 CLEC4MQ9H2X3 399 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 NKX2-4Q9H2Z4 354 aa7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 ABCB6Q9NP58 842 aa7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 RRAGDQ9NQL2 400 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 FLRT1Q9NZU1 646 aa7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 HMG20BQ9P0W2 317 aa7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 CCDC39Q9UFE4 941 aa7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 PRKAG2Q9UGJ0 569 aa7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 NOL7Q9UMY1 257 aaKnown RBP7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 ZDHHC9Q9Y397 364 aa7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 TCHHQ07283 1943 aa7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 RPAP1Q9BWH6 1393 aaPredicted RBP7.56□□□□□ -1.2
ECHDC1-202ENST00000368289 NBEAQ8NFP9 2946 aa7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 CCDC171Q6TFL3 1326 aa7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 COL4A6Q14031 1691 aa7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 PI4KAP2A4QPH2 592 aa7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 CXCL11O14625 94 aa7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 TPM3P06753 285 aa7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 HMGB1P09429 215 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 IFIT2P09913 472 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 IL1R1P14778 569 aa7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 RBM5P52756 815 aaKnown RBP eCLIP7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 FKBP1AP62942 108 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 NEXNQ0ZGT2 675 aa7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 IKBKEQ14164 716 aa7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 KRT32Q14532 448 aa7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 TMEM240Q5SV17 173 aa7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 NOL9Q5SY16 702 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 GJC2Q5T442 439 aaPredicted RBP7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 CAVIN1Q6NZI2 390 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 ASCL5Q7RTU5 278 aa7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 PI4KAP1Q8N8J0 262 aa7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 TRIM11Q96F44 468 aa7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 PANK2Q9BZ23 570 aa7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 OSGEPQ9NPF4 335 aa7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 DIAPH3Q9NSV4 1193 aa7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 C9orf78Q9NZ63 289 aaPredicted RBP7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 SLC45A1Q9Y2W3 748 aa7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 AFG3L2Q9Y4W6 797 aa7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 FRMPD3Q5JV73 1810 aa7.55□□□□□ -1.2
ECHDC1-202ENST00000368289 LOC400499M0QZD8 3231 aa7.54□□□□□ -1.2
ECHDC1-202ENST00000368289 CEP295Q9C0D2 2601 aa7.54□□□□□ -1.2
ECHDC1-202ENST00000368289 WDFY3Q8IZQ1 3526 aa7.54□□□□□ -1.2
ECHDC1-202ENST00000368289 METTL12A8MUP2 240 aa7.54□□□□□ -1.2
ECHDC1-202ENST00000368289 LINC01387J3KSC0 135 aa7.54□□□□□ -1.2
ECHDC1-202ENST00000368289 DNM1LO00429 736 aa7.54□□□□□ -1.2
ECHDC1-202ENST00000368289 KIAA0355O15063 1070 aa7.54□□□□□ -1.2
ECHDC1-202ENST00000368289 MYOGP15173 224 aa7.54□□□□□ -1.2
ECHDC1-202ENST00000368289 UBE2HP62256 183 aa7.54□□□□□ -1.2
ECHDC1-202ENST00000368289 TAGLNQ01995 201 aaKnown RBP7.54□□□□□ -1.2
ECHDC1-202ENST00000368289 G3BP1Q13283 466 aaKnown RBP eCLIP7.54□□□□□ -1.21e-11■■■□□ 15.6
ECHDC1-202ENST00000368289 SPRED3Q2MJR0 410 aa7.54□□□□□ -1.2
ECHDC1-202ENST00000368289 CCDC152Q4G0S7 254 aa7.54□□□□□ -1.2
ECHDC1-202ENST00000368289 CCDC84Q86UT8 332 aaPredicted RBP7.54□□□□□ -1.2
ECHDC1-202ENST00000368289 ZGPATQ8N5A5 531 aaKnown RBP7.54□□□□□ -1.2
ECHDC1-202ENST00000368289 KLHL23Q8NBE8 558 aa7.54□□□□□ -1.2
ECHDC1-202ENST00000368289 FOXD4L4Q8WXT5 416 aaPredicted RBP7.54□□□□□ -1.2
ECHDC1-202ENST00000368289 TTC14Q96N46 770 aa7.54□□□□□ -1.2
ECHDC1-202ENST00000368289 LSG1Q9H089 658 aaKnown RBP7.54□□□□□ -1.2
ECHDC1-202ENST00000368289 GREM2Q9H772 168 aa7.54□□□□□ -1.2
ECHDC1-202ENST00000368289 PHAXQ9H814 394 aaKnown RBP7.54□□□□□ -1.2
ECHDC1-202ENST00000368289 CHPF2Q9P2E5 772 aa7.54□□□□□ -1.2
ECHDC1-202ENST00000368289 PPM1HQ9ULR3 514 aa7.54□□□□□ -1.2
ECHDC1-202ENST00000368289 LEMD3Q9Y2U8 911 aa7.54□□□□□ -1.2
ECHDC1-202ENST00000368289 CYP46A1Q9Y6A2 500 aa7.54□□□□□ -1.2
ECHDC1-202ENST00000368289 PLXNA3P51805 1871 aa7.53□□□□□ -1.2
ECHDC1-202ENST00000368289 A0A0A0MRY4 1105 aa7.53□□□□□ -1.2
ECHDC1-202ENST00000368289 GRM8O00222 908 aa7.53□□□□□ -1.2
ECHDC1-202ENST00000368289 OFD1O75665 1012 aa7.53□□□□□ -1.2
ECHDC1-202ENST00000368289 CAVIN2O95810 425 aa7.53□□□□□ -1.2
ECHDC1-202ENST00000368289 ZSCAN22P10073 491 aaPredicted RBP7.53□□□□□ -1.2
ECHDC1-202ENST00000368289 EPHA1P21709 976 aa7.53□□□□□ -1.2
ECHDC1-202ENST00000368289 OS9Q13438 667 aaPredicted RBP7.53□□□□□ -1.2
ECHDC1-202ENST00000368289 CCDC183Q5T5S1 534 aa7.53□□□□□ -1.2
ECHDC1-202ENST00000368289 MTERF4Q7Z6M4 381 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-202ENST00000368289 TTLL11Q8NHH1 800 aa7.53□□□□□ -1.2
ECHDC1-202ENST00000368289 PLBD2Q8NHP8 589 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms