RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 DNAJC25Q9H1X3 360 aa10.65□□□□□ -0.7
VTA1-201ENST00000367621 BLZF1Q9H2G9 400 aa10.65□□□□□ -0.7
VTA1-201ENST00000367621 BCAS3Q9H6U6 928 aa10.65□□□□□ -0.7
VTA1-201ENST00000367621 ZCCHC17Q9NP64 241 aaKnown RBP10.65□□□□□ -0.7
VTA1-201ENST00000367621 COL11A1P12107 1806 aaPredicted RBP10.64□□□□□ -0.71
VTA1-201ENST00000367621 GRXCR2A6NFK2 248 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 GAS7O60861 476 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 COBLO75128 1261 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 STAM2O75886 525 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 SLITRK3O94933 977 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 CCNE2O96020 404 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 KCNA2P16389 499 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 RPA1P27694 616 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 ICAM3P32942 547 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 TM4SF4P48230 202 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 MRE11P49959 708 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 PSMC6P62333 389 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 SP2Q02086 613 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 MTMR1Q13613 665 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 MCM6Q14566 821 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 IQCB1Q15051 598 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 EPHA7Q15375 998 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 ZRSR1Q15695 479 aaKnown RBP10.64□□□□□ -0.71
VTA1-201ENST00000367621 FAM110CQ1W6H9 321 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 ZNF792Q3KQV3 632 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 ISM2Q6H9L7 571 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 C17orf99Q6UX52 265 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 RNF214Q8ND24 703 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 TATDN2Q93075 761 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 CCDC102AQ96A19 550 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 CALML4Q96GE6 196 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 MMP19Q99542 508 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 C7orf25Q9BPX7 421 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 MAGEF1Q9HAY2 307 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 CBX8Q9HC52 389 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 ANO10Q9NW15 660 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 RGL1Q9NZL6 768 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 PKD2L1Q9P0L9 805 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 WRAP73Q9P2S5 460 aaPredicted RBP10.64□□□□□ -0.71
VTA1-201ENST00000367621 STK17AQ9UEE5 414 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 TELO2Q9Y4R8 837 aa10.64□□□□□ -0.71
VTA1-201ENST00000367621 MYMKA6NI61 221 aa10.63□□□□□ -0.71
VTA1-201ENST00000367621 E9PMD0 336 aa10.63□□□□□ -0.71
VTA1-201ENST00000367621 SMAPO00193 183 aa10.63□□□□□ -0.71
VTA1-201ENST00000367621 MAFGO15525 162 aa10.63□□□□□ -0.71
VTA1-201ENST00000367621 EIF3JO75822 258 aaKnown RBP10.63□□□□□ -0.71
VTA1-201ENST00000367621 FCER1AP12319 257 aa10.63□□□□□ -0.71
VTA1-201ENST00000367621 INHBEP58166 350 aa10.63□□□□□ -0.71
VTA1-201ENST00000367621 CCNA1P78396 465 aa10.63□□□□□ -0.71
VTA1-201ENST00000367621 KCTD2Q14681 263 aa10.63□□□□□ -0.71
VTA1-201ENST00000367621 STXBP2Q15833 593 aa10.63□□□□□ -0.71
VTA1-201ENST00000367621 CNNM4Q6P4Q7 775 aa10.63□□□□□ -0.71
VTA1-201ENST00000367621 ABRAQ8N0Z2 381 aa10.63□□□□□ -0.71
VTA1-201ENST00000367621 ZNF784Q8NCA9 323 aaPredicted RBP10.63□□□□□ -0.71
VTA1-201ENST00000367621 FAM200AQ8TCP9 573 aa10.63□□□□□ -0.71
VTA1-201ENST00000367621 SMARCE1Q969G3 411 aa10.63□□□□□ -0.71
VTA1-201ENST00000367621 DYDC2Q96IM9 177 aa10.63□□□□□ -0.71
VTA1-201ENST00000367621 GSDMAQ96QA5 445 aa10.63□□□□□ -0.71
VTA1-201ENST00000367621 MED15Q96RN5 788 aa10.63□□□□□ -0.71
VTA1-201ENST00000367621 SENP7Q9BQF6 1050 aa10.63□□□□□ -0.71
VTA1-201ENST00000367621 TEKT3Q9BXF9 490 aa10.63□□□□□ -0.71
VTA1-201ENST00000367621 TRIM9Q9C026 710 aa10.63□□□□□ -0.71
VTA1-201ENST00000367621 TBC1D22BQ9NU19 505 aa10.63□□□□□ -0.71
VTA1-201ENST00000367621 CPA4Q9UI42 421 aa10.63□□□□□ -0.71
VTA1-201ENST00000367621 HOOK1Q9UJC3 728 aaKnown RBP10.63□□□□□ -0.71
VTA1-201ENST00000367621 ABT1Q9ULW3 272 aaKnown RBP10.63□□□□□ -0.71
VTA1-201ENST00000367621 KIAA1024Q9UPX6 916 aa10.63□□□□□ -0.71
VTA1-201ENST00000367621 KDM3AQ9Y4C1 1321 aa10.62□□□□□ -0.71
VTA1-201ENST00000367621 GPR37O15354 613 aa10.62□□□□□ -0.71
VTA1-201ENST00000367621 CHMP2AO43633 222 aa10.62□□□□□ -0.71
VTA1-201ENST00000367621 SMC2O95347 1197 aa10.62□□□□□ -0.71
VTA1-201ENST00000367621 RPN1P04843 607 aaKnown RBP10.62□□□□□ -0.71
VTA1-201ENST00000367621 MYL1P05976 194 aa10.62□□□□□ -0.71
VTA1-201ENST00000367621 DEKP35659 375 aaKnown RBP10.62□□□□□ -0.71
VTA1-201ENST00000367621 SLC12A3P55017 1021 aa10.62□□□□□ -0.71
VTA1-201ENST00000367621 CTTNQ14247 550 aaKnown RBP10.62□□□□□ -0.71
VTA1-201ENST00000367621 GRB14Q14449 540 aa10.62□□□□□ -0.71
VTA1-201ENST00000367621 ARSHQ5FYA8 562 aa10.62□□□□□ -0.71
VTA1-201ENST00000367621 SV2BQ7L1I2 683 aa10.62□□□□□ -0.71
VTA1-201ENST00000367621 GPR142Q7Z601 462 aa10.62□□□□□ -0.71
VTA1-201ENST00000367621 NLRX1Q86UT6 975 aa10.62□□□□□ -0.71
VTA1-201ENST00000367621 DHX40Q8IX18 779 aaKnown RBP10.62□□□□□ -0.71
VTA1-201ENST00000367621 TRIML1Q8N9V2 468 aa10.62□□□□□ -0.71
VTA1-201ENST00000367621 RASSF8Q8NHQ8 419 aa10.62□□□□□ -0.71
VTA1-201ENST00000367621 ERMNQ8TAM6 284 aa10.62□□□□□ -0.71
VTA1-201ENST00000367621 LARP4BQ92615 738 aaKnown RBP10.62□□□□□ -0.71
VTA1-201ENST00000367621 DNAJC19Q96DA6 116 aa10.62□□□□□ -0.71
VTA1-201ENST00000367621 BPIFA3Q9BQP9 254 aa10.62□□□□□ -0.71
VTA1-201ENST00000367621 NT5C3AQ9H0P0 336 aa10.62□□□□□ -0.71
VTA1-201ENST00000367621 TUFT1Q9NNX1 390 aa10.62□□□□□ -0.71
VTA1-201ENST00000367621 ADD3Q9UEY8 706 aaKnown RBP10.62□□□□□ -0.71
VTA1-201ENST00000367621 NFASCO94856 1347 aa10.61□□□□□ -0.71
VTA1-201ENST00000367621 LCTP09848 1927 aa10.61□□□□□ -0.71
VTA1-201ENST00000367621 LOC102724159A0A0B4J2E5 919 aa10.61□□□□□ -0.71
VTA1-201ENST00000367621 RASSF10A6NK89 507 aa10.61□□□□□ -0.71
VTA1-201ENST00000367621 DDX39AO00148 427 aaKnown RBP10.61□□□□□ -0.71
VTA1-201ENST00000367621 ZBTB39O15060 712 aa10.61□□□□□ -0.71
VTA1-201ENST00000367621 AP5Z1O43299 807 aa10.61□□□□□ -0.71
VTA1-201ENST00000367621 STRNO43815 780 aa10.61□□□□□ -0.71
VTA1-201ENST00000367621 TLR2O60603 784 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms