RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 SWT1Q5T5J6 900 aaKnown RBP13.22□□□□□ -0.29
SHPRH-202ENST00000367503 AGBL2Q5U5Z8 902 aa13.22□□□□□ -0.29
SHPRH-202ENST00000367503 TTLL11Q8NHH1 800 aa13.22□□□□□ -0.29
SHPRH-202ENST00000367503 MAML1Q92585 1016 aa13.22□□□□□ -0.29
SHPRH-202ENST00000367503 DDX39AO00148 427 aaKnown RBP13.22□□□□□ -0.29
SHPRH-202ENST00000367503 PSMD14O00487 310 aa13.22□□□□□ -0.29
SHPRH-202ENST00000367503 DNAJC6O75061 913 aa13.22□□□□□ -0.29
SHPRH-202ENST00000367503 PDHBP11177 359 aa13.22□□□□□ -0.29
SHPRH-202ENST00000367503 CHN1P15882 459 aa13.22□□□□□ -0.29
SHPRH-202ENST00000367503 PPWD1Q96BP3 646 aaKnown RBP13.22□□□□□ -0.29
SHPRH-202ENST00000367503 TTC1Q99614 292 aa13.22□□□□□ -0.29
SHPRH-202ENST00000367503 WDR19Q8NEZ3 1342 aa13.22□□□□□ -0.29
SHPRH-202ENST00000367503 hCG_1984214I3L0E3 225 aa13.22□□□□□ -0.29
SHPRH-202ENST00000367503 CRCPO75575 148 aa13.22□□□□□ -0.29
SHPRH-202ENST00000367503 OLFML2BQ68BL8 750 aa13.22□□□□□ -0.29
SHPRH-202ENST00000367503 EPM2AIP1Q7L775 607 aaPredicted RBP13.22□□□□□ -0.29
SHPRH-202ENST00000367503 ZNF713Q8N859 430 aaPredicted RBP13.22□□□□□ -0.29
SHPRH-202ENST00000367503 JDP2Q8WYK2 163 aa13.22□□□□□ -0.29
SHPRH-202ENST00000367503 CCT6BQ92526 530 aa13.22□□□□□ -0.29
SHPRH-202ENST00000367503 TRAIPQ9BWF2 469 aa13.22□□□□□ -0.29
SHPRH-202ENST00000367503 RHBDL2Q9NX52 303 aa13.22□□□□□ -0.29
SHPRH-202ENST00000367503 MT-ND3P03897 115 aa13.21□□□□□ -0.29
SHPRH-202ENST00000367503 MYCLP12524 364 aaPredicted RBP13.21□□□□□ -0.29
SHPRH-202ENST00000367503 BRAFP15056 766 aa13.21□□□□□ -0.29
SHPRH-202ENST00000367503 ATF7P17544 494 aaPredicted RBP13.21□□□□□ -0.29
SHPRH-202ENST00000367503 TNNI1P19237 187 aa13.21□□□□□ -0.29
SHPRH-202ENST00000367503 NR2F2P24468 414 aa13.21□□□□□ -0.29
SHPRH-202ENST00000367503 SCTRP47872 440 aa13.21□□□□□ -0.29
SHPRH-202ENST00000367503 YWHAEP62258 255 aaKnown RBP13.21□□□□□ -0.29
SHPRH-202ENST00000367503 BFSP1Q12934 665 aa13.21□□□□□ -0.29
SHPRH-202ENST00000367503 AOC3Q16853 763 aa13.21□□□□□ -0.29
SHPRH-202ENST00000367503 RCSD1Q6JBY9 416 aa13.21□□□□□ -0.29
SHPRH-202ENST00000367503 USP6NLQ92738 828 aa13.21□□□□□ -0.29
SHPRH-202ENST00000367503 MOV10L1Q9BXT6 1211 aaKnown RBP13.21□□□□□ -0.29
SHPRH-202ENST00000367503 DDX47Q9H0S4 455 aaKnown RBP13.21□□□□□ -0.29
SHPRH-202ENST00000367503 GJB4Q9NTQ9 266 aa13.21□□□□□ -0.29
SHPRH-202ENST00000367503 GDAQ9Y2T3 454 aa13.21□□□□□ -0.29
SHPRH-202ENST00000367503 SOS2Q07890 1332 aaPredicted RBP13.21□□□□□ -0.29
SHPRH-202ENST00000367503 PRR36Q9H6K5 1346 aa13.21□□□□□ -0.29
SHPRH-202ENST00000367503 RASA4BC9J798 803 aa13.21□□□□□ -0.29
SHPRH-202ENST00000367503 RASA4O43374 803 aa13.21□□□□□ -0.29
SHPRH-202ENST00000367503 TMOD1P28289 359 aa13.21□□□□□ -0.29
SHPRH-202ENST00000367503 LRRN4CLQ8ND94 238 aa13.21□□□□□ -0.29
SHPRH-202ENST00000367503 FAM161BQ96MY7 647 aa13.21□□□□□ -0.29
SHPRH-202ENST00000367503 TRPM1Q7Z4N2 1603 aa13.21□□□□□ -0.29
SHPRH-202ENST00000367503 IGF2BP3O00425 579 aaKnown RBP eCLIP13.21□□□□□ -0.29
SHPRH-202ENST00000367503 ZRANB2O95218 330 aaKnown RBP eCLIP13.21□□□□□ -0.297e-6■■■■■ 37.3
SHPRH-202ENST00000367503 TSGA10IPQ3SY00 556 aa13.21□□□□□ -0.29
SHPRH-202ENST00000367503 DPP8Q6V1X1 898 aaPredicted RBP13.21□□□□□ -0.29
SHPRH-202ENST00000367503 SRRM1Q8IYB3 904 aaKnown RBP13.21□□□□□ -0.29
SHPRH-202ENST00000367503 HIPK4Q8NE63 616 aa13.21□□□□□ -0.29
SHPRH-202ENST00000367503 C8orf37Q96NL8 207 aa13.21□□□□□ -0.29
SHPRH-202ENST00000367503 EFHD1Q9BUP0 239 aa13.21□□□□□ -0.29
SHPRH-202ENST00000367503 USP40Q9NVE5 1235 aa13.21□□□□□ -0.29
SHPRH-202ENST00000367503 KIAA1024Q9UPX6 916 aa13.21□□□□□ -0.29
SHPRH-202ENST00000367503 TRAF3IP3Q9Y228 551 aa13.21□□□□□ -0.29
SHPRH-202ENST00000367503 YEATS2Q9ULM3 1422 aa13.21□□□□□ -0.3
SHPRH-202ENST00000367503 TCP11X1B4DZS4 312 aa13.21□□□□□ -0.3
SHPRH-202ENST00000367503 SLC44A4Q53GD3 710 aa13.21□□□□□ -0.3
SHPRH-202ENST00000367503 GPATCH4Q5T3I0 446 aaKnown RBP13.21□□□□□ -0.3
SHPRH-202ENST00000367503 ALKBH5Q6P6C2 394 aaKnown RBP13.21□□□□□ -0.3
SHPRH-202ENST00000367503 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.21□□□□□ -0.3
SHPRH-202ENST00000367503 PRAMEF22A3QJZ6 481 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 H7C1W4 665 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 HSPA9P38646 679 aaKnown RBP13.2□□□□□ -0.3
SHPRH-202ENST00000367503 IL6STP40189 918 aaPredicted RBP13.2□□□□□ -0.3
SHPRH-202ENST00000367503 YWHAGP61981 247 aaKnown RBP eCLIP13.2□□□□□ -0.3
SHPRH-202ENST00000367503 GFPT1Q06210 699 aaPredicted RBP13.2□□□□□ -0.3
SHPRH-202ENST00000367503 NR1H3Q13133 447 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 HIC2Q96JB3 615 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 SERPINI1Q99574 410 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 SLITRK6Q9H5Y7 841 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 STK36Q9NRP7 1315 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 AFPP02771 609 aaKnown RBP13.2□□□□□ -0.3
SHPRH-202ENST00000367503 SERPINB3P29508 390 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 CYLC2Q14093 348 aaPredicted RBP13.2□□□□□ -0.3
SHPRH-202ENST00000367503 RGS9BPQ6ZS82 235 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 ANO5Q75V66 913 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 KIF2BQ8N4N8 673 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.2□□□□□ -0.32e-6■■■□□ 16.4
SHPRH-202ENST00000367503 TRIM56Q9BRZ2 755 aaKnown RBP13.2□□□□□ -0.3
SHPRH-202ENST00000367503 HAUS8Q9BT25 410 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 MED14O60244 1454 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 A0A1W2PQC6 194 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 HNRNPCL1O60812 293 aaKnown RBP13.2□□□□□ -0.3
SHPRH-202ENST00000367503 CDC25AP30304 524 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 ASPHQ12797 758 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 ASPRV1Q53RT3 343 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 SHC4Q6S5L8 630 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 PPARGC1AQ9UBK2 798 aaKnown RBP13.2□□□□□ -0.3
SHPRH-202ENST00000367503 LRRC53A6NM62 1247 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 H0YCG3 227 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 AGTP01019 485 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 PLS3P13797 630 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 NR1I3Q14994 352 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 FBXO11Q86XK2 927 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 MMGT1Q8N4V1 131 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 TTC16Q8NEE8 873 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 GJA10Q969M2 543 aa13.2□□□□□ -0.3
SHPRH-202ENST00000367503 MTA3Q9BTC8 594 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms