RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 SREBF1P36956 1147 aa16.92■□□□□ 0.3
CTSD-202ENST00000367196 SLC26A2P50443 739 aa16.92■□□□□ 0.3
CTSD-202ENST00000367196 TFF2Q03403 129 aa16.92■□□□□ 0.3
CTSD-202ENST00000367196 ADCK5Q3MIX3 580 aa16.92■□□□□ 0.3
CTSD-202ENST00000367196 KRT40Q6A162 431 aa16.92■□□□□ 0.3
CTSD-202ENST00000367196 NIPA1Q7RTP0 329 aa16.92■□□□□ 0.3
CTSD-202ENST00000367196 PLPPR4Q7Z2D5 763 aa16.92■□□□□ 0.3
CTSD-202ENST00000367196 SPRED2Q7Z698 418 aa16.92■□□□□ 0.3
CTSD-202ENST00000367196 TELO2Q9Y4R8 837 aa16.92■□□□□ 0.3
CTSD-202ENST00000367196 RALGAPA2Q2PPJ7 1873 aa16.92■□□□□ 0.3
CTSD-202ENST00000367196 UPP2O95045 317 aa16.91■□□□□ 0.3
CTSD-202ENST00000367196 BMP1P13497 986 aa16.91■□□□□ 0.3
CTSD-202ENST00000367196 FUT2Q10981 343 aa16.91■□□□□ 0.3
CTSD-202ENST00000367196 IER5Q5VY09 327 aa16.91■□□□□ 0.3
CTSD-202ENST00000367196 BLOC1S2Q6QNY1 142 aa16.91■□□□□ 0.3
CTSD-202ENST00000367196 RUFY4Q6ZNE9 571 aa16.91■□□□□ 0.3
CTSD-202ENST00000367196 RWDD3Q9Y3V2 267 aa16.91■□□□□ 0.3
CTSD-202ENST00000367196 XIRP2A4UGR9 3374 aa16.91■□□□□ 0.3
CTSD-202ENST00000367196 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.9■□□□□ 0.3
CTSD-202ENST00000367196 ESYT2A0FGR8 921 aa16.9■□□□□ 0.3
CTSD-202ENST00000367196 REC8O95072 547 aa16.9■□□□□ 0.3
CTSD-202ENST00000367196 CHRNA1P02708 482 aa16.9■□□□□ 0.3
CTSD-202ENST00000367196 GHRP10912 638 aa16.9■□□□□ 0.3
CTSD-202ENST00000367196 CDC27P30260 824 aa16.9■□□□□ 0.3
CTSD-202ENST00000367196 CLK2P49760 499 aaKnown RBP16.9■□□□□ 0.3
CTSD-202ENST00000367196 STAT5BP51692 787 aa16.9■□□□□ 0.3
CTSD-202ENST00000367196 KCNQ1P51787 676 aa16.9■□□□□ 0.3
CTSD-202ENST00000367196 ACTR2P61160 394 aa16.9■□□□□ 0.3
CTSD-202ENST00000367196 IGBP1P78318 339 aa16.9■□□□□ 0.3
CTSD-202ENST00000367196 MRPS6P82932 125 aaKnown RBP16.9■□□□□ 0.3
CTSD-202ENST00000367196 SETQ01105 290 aaPredicted RBP16.9■□□□□ 0.3
CTSD-202ENST00000367196 AKAP17AQ02040 695 aaKnown RBP16.9■□□□□ 0.3
CTSD-202ENST00000367196 MGAT3Q09327 533 aa16.9■□□□□ 0.3
CTSD-202ENST00000367196 PFKFB3Q16875 520 aaPredicted RBP16.9■□□□□ 0.3
CTSD-202ENST00000367196 TIGD5Q53EQ6 642 aa16.9■□□□□ 0.3
CTSD-202ENST00000367196 FAM160B1Q5W0V3 765 aa16.9■□□□□ 0.3
CTSD-202ENST00000367196 TYW1BQ6NUM6 668 aa16.9■□□□□ 0.3
CTSD-202ENST00000367196 TSHZ1Q6ZSZ6 1077 aa16.9■□□□□ 0.3
CTSD-202ENST00000367196 DNAJB3Q8WWF6 145 aa16.9■□□□□ 0.3
CTSD-202ENST00000367196 PGBD1Q96JS3 809 aa16.9■□□□□ 0.3
CTSD-202ENST00000367196 C17orf80Q9BSJ5 609 aa16.9■□□□□ 0.3
CTSD-202ENST00000367196 AGO4Q9HCK5 861 aaKnown RBP16.9■□□□□ 0.3
CTSD-202ENST00000367196 C6orf50Q9HD87 102 aa16.9■□□□□ 0.3
CTSD-202ENST00000367196 TCEAL9Q9UHQ7 104 aa16.9■□□□□ 0.3
CTSD-202ENST00000367196 SQORQ9Y6N5 450 aa16.9■□□□□ 0.3
CTSD-202ENST00000367196 NLRC5Q86WI3 1866 aa16.9■□□□□ 0.3
CTSD-202ENST00000367196 NID2Q14112 1375 aa16.89■□□□□ 0.3
CTSD-202ENST00000367196 TCF20Q9UGU0 1960 aaKnown RBP16.89■□□□□ 0.3
CTSD-202ENST00000367196 MEIS1O00470 390 aa16.89■□□□□ 0.29
CTSD-202ENST00000367196 SCG2P13521 617 aa16.89■□□□□ 0.29
CTSD-202ENST00000367196 INSRRP14616 1297 aa16.89■□□□□ 0.29
CTSD-202ENST00000367196 PSMA5P28066 241 aa16.89■□□□□ 0.29
CTSD-202ENST00000367196 GNA11P29992 359 aa16.89■□□□□ 0.29
CTSD-202ENST00000367196 EPC2Q52LR7 807 aa16.89■□□□□ 0.29
CTSD-202ENST00000367196 MARCH8Q5T0T0 291 aa16.89■□□□□ 0.29
CTSD-202ENST00000367196 FAM43BQ6ZT52 329 aaPredicted RBP16.89■□□□□ 0.29
CTSD-202ENST00000367196 Q6ZUG5 572 aa16.89■□□□□ 0.29
CTSD-202ENST00000367196 SKAP1Q86WV1 359 aa16.89■□□□□ 0.29
CTSD-202ENST00000367196 KCNB2Q92953 911 aa16.89■□□□□ 0.29
CTSD-202ENST00000367196 MRPL38Q96DV4 380 aaKnown RBP16.89■□□□□ 0.29
CTSD-202ENST00000367196 IL17RAQ96F46 866 aa16.89■□□□□ 0.29
CTSD-202ENST00000367196 CCDC136Q96JN2 1154 aa16.89■□□□□ 0.29
CTSD-202ENST00000367196 JAKMIP1Q96N16 626 aaKnown RBP16.89■□□□□ 0.29
CTSD-202ENST00000367196 FTHL17Q9BXU8 183 aa16.89■□□□□ 0.29
CTSD-202ENST00000367196 CDY2AQ9Y6F7 541 aa16.89■□□□□ 0.29
CTSD-202ENST00000367196 POTEB3A0JP26 581 aa16.88■□□□□ 0.29
CTSD-202ENST00000367196 ARP10275 920 aa16.88■□□□□ 0.29
CTSD-202ENST00000367196 HSPA4P34932 840 aa16.88■□□□□ 0.29
CTSD-202ENST00000367196 APOBRQ0VD83 1088 aa16.88■□□□□ 0.29
CTSD-202ENST00000367196 LPIN1Q14693 890 aa16.88■□□□□ 0.29
CTSD-202ENST00000367196 FBXO47Q5MNV8 452 aa16.88■□□□□ 0.29
CTSD-202ENST00000367196 POTEBQ6S5H4 581 aa16.88■□□□□ 0.29
CTSD-202ENST00000367196 TMEM192Q8IY95 271 aa16.88■□□□□ 0.29
CTSD-202ENST00000367196 REXO1Q8N1G1 1221 aaKnown RBP16.88■□□□□ 0.29
CTSD-202ENST00000367196 NME8Q8N427 588 aa16.88■□□□□ 0.29
CTSD-202ENST00000367196 FBXL16Q8N461 479 aa16.88■□□□□ 0.29
CTSD-202ENST00000367196 FIBCD1Q8N539 461 aa16.88■□□□□ 0.29
CTSD-202ENST00000367196 CCDC148Q8NFR7 591 aa16.88■□□□□ 0.29
CTSD-202ENST00000367196 CYP2W1Q8TAV3 490 aa16.88■□□□□ 0.29
CTSD-202ENST00000367196 BICD2Q8TD16 824 aa16.88■□□□□ 0.29
CTSD-202ENST00000367196 BRF1Q92994 677 aa16.88■□□□□ 0.29
CTSD-202ENST00000367196 FAM217BQ9NTX9 383 aaPredicted RBP16.88■□□□□ 0.29
CTSD-202ENST00000367196 PCDHA2Q9Y5H9 948 aa16.88■□□□□ 0.29
CTSD-202ENST00000367196 BRWD1Q9NSI6 2320 aa16.88■□□□□ 0.29
CTSD-202ENST00000367196 H3BNC9 293 aa16.87■□□□□ 0.29
CTSD-202ENST00000367196 BACH1O14867 736 aa16.87■□□□□ 0.29
CTSD-202ENST00000367196 CYP3A4P08684 503 aa16.87■□□□□ 0.29
CTSD-202ENST00000367196 ITGB3BPQ13352 177 aaPredicted RBP16.87■□□□□ 0.29
CTSD-202ENST00000367196 PLCB4Q15147 1175 aa16.87■□□□□ 0.29
CTSD-202ENST00000367196 MIS18BP1Q6P0N0 1132 aa16.87■□□□□ 0.29
CTSD-202ENST00000367196 PLA2G4DQ86XP0 818 aa16.87■□□□□ 0.29
CTSD-202ENST00000367196 PCYT2Q99447 389 aa16.87■□□□□ 0.29
CTSD-202ENST00000367196 ZMYND12Q9H0C1 365 aa16.87■□□□□ 0.29
CTSD-202ENST00000367196 FAM49AQ9H0Q0 323 aaPredicted RBP16.87■□□□□ 0.29
CTSD-202ENST00000367196 TBC1D22BQ9NU19 505 aa16.87■□□□□ 0.29
CTSD-202ENST00000367196 TMEM260Q9NX78 707 aa16.87■□□□□ 0.29
CTSD-202ENST00000367196 TRPV2Q9Y5S1 764 aa16.87■□□□□ 0.29
CTSD-202ENST00000367196 SNX14Q9Y5W7 946 aa16.87■□□□□ 0.29
CTSD-202ENST00000367196 BDP1A6H8Y1 2624 aa16.87■□□□□ 0.29
CTSD-202ENST00000367196 ADGRA3Q8IWK6 1321 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms