RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 TUBB6Q9BUF5 446 aa16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 INPP5FQ9Y2H2 1132 aa16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 ZBTB1Q9Y2K1 713 aa16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 FARP1Q9Y4F1 1045 aaPredicted RBP16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 INSRP06213 1382 aa16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 DRP2Q13474 957 aa16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 TAF1BQ53T94 588 aaPredicted RBP16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 EMILIN3Q9NT22 766 aa16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 PNMA6FA0A0J9YX94 578 aa16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 SNX2O60749 519 aa16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 TTC19Q6DKK2 380 aaPredicted RBP16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 LRRC31Q6UY01 552 aa16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 TEX12Q9BXU0 123 aa16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 MYOM2P54296 1465 aa16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 PLA2G4BP0C869 781 aa16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 ZNF667Q5HYK9 610 aa16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 ACBD5Q5T8D3 534 aaPredicted RBP16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 EXT2Q93063 718 aa16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 MRFAP1L1Q96HT8 127 aa16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 ATP6V0A4Q9HBG4 840 aa16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 PACSIN2Q9UNF0 486 aaPredicted RBP16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 ATP7AQ04656 1500 aa16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 GLE1Q53GS7 698 aaKnown RBP16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 FAM133AQ8N9E0 248 aa16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 HSPH1Q92598 858 aa16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 SKIV2LQ15477 1246 aaKnown RBP16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 LCMT1Q9UIC8 334 aa16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 PHKA2P46019 1235 aa16.89■□□□□ 0.29
NUCKS1-201ENST00000367142 NSUN2Q08J23 767 aaKnown RBP eCLIP16.89■□□□□ 0.29
NUCKS1-201ENST00000367142 STXBP2Q15833 593 aa16.89■□□□□ 0.29
NUCKS1-201ENST00000367142 ZBTB41Q5SVQ8 909 aa16.89■□□□□ 0.29
NUCKS1-201ENST00000367142 DCAF4Q8WV16 495 aa16.89■□□□□ 0.29
NUCKS1-201ENST00000367142 SLC7A5P2Q9GIP4 190 aa16.89■□□□□ 0.29
NUCKS1-201ENST00000367142 KIAA0556O60303 1618 aa16.89■□□□□ 0.29
NUCKS1-201ENST00000367142 IQANK1A0A1B0GTG1 560 aa16.89■□□□□ 0.29
NUCKS1-201ENST00000367142 FAM95CA0A1B0GW59 222 aa16.89■□□□□ 0.29
NUCKS1-201ENST00000367142 MTMR6Q9Y217 621 aa16.89■□□□□ 0.29
NUCKS1-201ENST00000367142 PSMA2P25787 234 aa16.89■□□□□ 0.29
NUCKS1-201ENST00000367142 ESRRGP62508 458 aa16.89■□□□□ 0.29
NUCKS1-201ENST00000367142 SLMAPQ14BN4 828 aa16.89■□□□□ 0.29
NUCKS1-201ENST00000367142 SLC39A14Q15043 492 aa16.89■□□□□ 0.29
NUCKS1-201ENST00000367142 SCYL3Q8IZE3 742 aa16.89■□□□□ 0.29
NUCKS1-201ENST00000367142 HOXC10Q9NYD6 342 aa16.89■□□□□ 0.29
NUCKS1-201ENST00000367142 ADD2P35612 726 aa16.89■□□□□ 0.29
NUCKS1-201ENST00000367142 SZRD1Q7Z422 152 aa16.89■□□□□ 0.29
NUCKS1-201ENST00000367142 FBXO18Q8NFZ0 1043 aa16.89■□□□□ 0.29
NUCKS1-201ENST00000367142 LZICQ8WZA0 190 aa16.89■□□□□ 0.29
NUCKS1-201ENST00000367142 SEC31BQ9NQW1 1179 aa16.89■□□□□ 0.29
NUCKS1-201ENST00000367142 MYO3BQ8WXR4 1341 aa16.89■□□□□ 0.29
NUCKS1-201ENST00000367142 PLTPP55058 493 aa16.89■□□□□ 0.29
NUCKS1-201ENST00000367142 APOA5Q6Q788 366 aa16.89■□□□□ 0.29
NUCKS1-201ENST00000367142 SERPINI1Q99574 410 aa16.89■□□□□ 0.29
NUCKS1-201ENST00000367142 CA4P22748 312 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 UBE2SQ16763 222 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 CDO1Q16878 200 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 TMEM179Q6ZVK1 233 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 SUN2Q9UH99 717 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 SUFUQ9UMX1 484 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 OCRLQ01968 901 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 NEUROG2Q9H2A3 272 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 ZWILCHQ9H900 591 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 HUS1O60921 280 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 ASNSP08243 561 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 USP17L8P0C7I0 530 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 MFSD14CQ5VZR4 134 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 TTC23LQ6PF05 361 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 SPATA17Q96L03 361 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 EDEM3Q9BZQ6 932 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 COBLO75128 1261 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 CLTAP09496 248 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 IFNAR2P48551 515 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 EPHB4P54760 987 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 PPP4R3CPQ6ZMV5 832 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 SCN4BQ8IWT1 228 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 YAF2Q8IY57 180 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 SCG3Q8WXD2 468 aaKnown RBP16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 THAP9Q9H5L6 903 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 SUGT1Q9Y2Z0 365 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 TMEM94Q12767 1356 aa16.88■□□□□ 0.29
NUCKS1-201ENST00000367142 ERVV-1B6SEH8 477 aa16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 CTTNQ14247 550 aaKnown RBP16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 BEST2Q8NFU1 509 aa16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 BCAS4Q8TDM0 211 aa16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 FSD1LQ9BXM9 530 aa16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 CARMIL3Q8ND23 1372 aa16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 SERPING1P05155 500 aa16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 TWF2Q6IBS0 349 aaKnown RBP16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 LRRC8AQ8IWT6 810 aa16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 LCORLQ8N3X6 602 aa16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 CEP19Q96LK0 163 aa16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 KLC2Q9H0B6 622 aa16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 SCHIP1Q9P0W5 487 aaPredicted RBP16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 TCOF1Q13428 1488 aaKnown RBP16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 RGS12O14924 1447 aa16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 KIF19Q2TAC6 998 aa16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 RWDD2AQ9UIY3 292 aa16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 PRPF3O43395 683 aaKnown RBP16.87■□□□□ 0.29
NUCKS1-201ENST00000367142 PLS3P13797 630 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms