RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 EDIL3O43854 480 aa15.6■□□□□ 0.09
TNFRSF1A-202ENST00000366159 TLL1O43897 1013 aa15.6■□□□□ 0.09
TNFRSF1A-202ENST00000366159 CHRNA1P02708 482 aa15.6■□□□□ 0.09
TNFRSF1A-202ENST00000366159 ATXN8OSP0DMR3 200 aa15.6■□□□□ 0.09
TNFRSF1A-202ENST00000366159 ACTR2P61160 394 aa15.6■□□□□ 0.09
TNFRSF1A-202ENST00000366159 MGAT3Q09327 533 aa15.6■□□□□ 0.09
TNFRSF1A-202ENST00000366159 JAKMIP3Q5VZ66 844 aa15.6■□□□□ 0.09
TNFRSF1A-202ENST00000366159 PLPPR4Q7Z2D5 763 aa15.6■□□□□ 0.09
TNFRSF1A-202ENST00000366159 PRDM6Q9NQX0 595 aa15.6■□□□□ 0.09
TNFRSF1A-202ENST00000366159 NAP1L2Q9ULW6 460 aaPredicted RBP15.6■□□□□ 0.09
TNFRSF1A-202ENST00000366159 SIP14410 1827 aa15.6■□□□□ 0.09
TNFRSF1A-202ENST00000366159 LPXNO60711 386 aa15.59■□□□□ 0.09
TNFRSF1A-202ENST00000366159 CCNE2O96020 404 aa15.59■□□□□ 0.09
TNFRSF1A-202ENST00000366159 IGFBP4P22692 258 aa15.59■□□□□ 0.09
TNFRSF1A-202ENST00000366159 MARK3P27448 753 aa15.59■□□□□ 0.09
TNFRSF1A-202ENST00000366159 HTRA4P83105 476 aaPredicted RBP15.59■□□□□ 0.09
TNFRSF1A-202ENST00000366159 PPFIA1Q13136 1202 aa15.59■□□□□ 0.09
TNFRSF1A-202ENST00000366159 GRIK4Q16099 956 aa15.59■□□□□ 0.09
TNFRSF1A-202ENST00000366159 MCTP2Q6DN12 878 aa15.59■□□□□ 0.09
TNFRSF1A-202ENST00000366159 TAF2Q6P1X5 1199 aa15.59■□□□□ 0.09
TNFRSF1A-202ENST00000366159 GLG1Q92896 1179 aa15.59■□□□□ 0.09
TNFRSF1A-202ENST00000366159 CERS4Q9HA82 394 aa15.59■□□□□ 0.09
TNFRSF1A-202ENST00000366159 C6orf50Q9HD87 102 aa15.59■□□□□ 0.09
TNFRSF1A-202ENST00000366159 MTCH2Q9Y6C9 303 aa15.59■□□□□ 0.09
TNFRSF1A-202ENST00000366159 KAT6AQ92794 2004 aa15.58■□□□□ 0.09
TNFRSF1A-202ENST00000366159 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.58■□□□□ 0.08
TNFRSF1A-202ENST00000366159 CTSHP09668 335 aa15.58■□□□□ 0.08
TNFRSF1A-202ENST00000366159 INSRRP14616 1297 aa15.58■□□□□ 0.08
TNFRSF1A-202ENST00000366159 GNA11P29992 359 aa15.58■□□□□ 0.08
TNFRSF1A-202ENST00000366159 CIITAP33076 1130 aa15.58■□□□□ 0.08
TNFRSF1A-202ENST00000366159 PLCB4Q15147 1175 aa15.58■□□□□ 0.08
TNFRSF1A-202ENST00000366159 ERICH6BQ5W0A0 696 aa15.58■□□□□ 0.08
TNFRSF1A-202ENST00000366159 ABHD15Q6UXT9 468 aa15.58■□□□□ 0.08
TNFRSF1A-202ENST00000366159 CCDC12Q8WUD4 166 aaPredicted RBP15.58■□□□□ 0.08
TNFRSF1A-202ENST00000366159 SEPT8Q92599 483 aa15.58■□□□□ 0.08
TNFRSF1A-202ENST00000366159 TOP1MTQ969P6 601 aa15.58■□□□□ 0.08
TNFRSF1A-202ENST00000366159 ZNF274Q96GC6 653 aaPredicted RBP15.58■□□□□ 0.08
TNFRSF1A-202ENST00000366159 SDF4Q9BRK5 362 aa15.58■□□□□ 0.08
TNFRSF1A-202ENST00000366159 NCOA5Q9HCD5 579 aaKnown RBP15.58■□□□□ 0.08
TNFRSF1A-202ENST00000366159 PPP4R2Q9NY27 417 aa15.58■□□□□ 0.08
TNFRSF1A-202ENST00000366159 TUBE1Q9UJT0 475 aa15.58■□□□□ 0.08
TNFRSF1A-202ENST00000366159 LINC01553A4QN01 128 aa15.57■□□□□ 0.08
TNFRSF1A-202ENST00000366159 RRN3P2A6NIE6 340 aa15.57■□□□□ 0.08
TNFRSF1A-202ENST00000366159 NEFLP07196 543 aa15.57■□□□□ 0.08
TNFRSF1A-202ENST00000366159 STAT5BP51692 787 aa15.57■□□□□ 0.08
TNFRSF1A-202ENST00000366159 ERVK-21P61565 698 aa15.57■□□□□ 0.08
TNFRSF1A-202ENST00000366159 CCT2P78371 535 aaKnown RBP15.57■□□□□ 0.08
TNFRSF1A-202ENST00000366159 PLA2G4DQ86XP0 818 aa15.57■□□□□ 0.08
TNFRSF1A-202ENST00000366159 REXO1Q8N1G1 1221 aaKnown RBP15.57■□□□□ 0.08
TNFRSF1A-202ENST00000366159 SP7Q8TDD2 431 aaPredicted RBP15.57■□□□□ 0.08
TNFRSF1A-202ENST00000366159 PPM1EQ8WY54 764 aa15.57■□□□□ 0.08
TNFRSF1A-202ENST00000366159 APBB2Q92870 758 aa15.57■□□□□ 0.08
TNFRSF1A-202ENST00000366159 ZBED2Q9BTP6 218 aa15.57■□□□□ 0.08
TNFRSF1A-202ENST00000366159 SH3GLB2Q9NR46 395 aa15.57■□□□□ 0.08
TNFRSF1A-202ENST00000366159 CYP46A1Q9Y6A2 500 aa15.57■□□□□ 0.08
TNFRSF1A-202ENST00000366159 PPFIA3O75145 1194 aa15.56■□□□□ 0.08
TNFRSF1A-202ENST00000366159 AMHP03971 560 aa15.56■□□□□ 0.08
TNFRSF1A-202ENST00000366159 SLC26A2P50443 739 aa15.56■□□□□ 0.08
TNFRSF1A-202ENST00000366159 CCDC85BQ15834 202 aaPredicted RBP15.56■□□□□ 0.08
TNFRSF1A-202ENST00000366159 DNAJB3Q8WWF6 145 aa15.56■□□□□ 0.08
TNFRSF1A-202ENST00000366159 ATXN2LQ8WWM7 1075 aaKnown RBP15.56■□□□□ 0.08
TNFRSF1A-202ENST00000366159 ARNTL2Q8WYA1 636 aa15.56■□□□□ 0.08
TNFRSF1A-202ENST00000366159 LENG9Q96B70 501 aa15.56■□□□□ 0.08
TNFRSF1A-202ENST00000366159 ZBTB10Q96DT7 871 aa15.56■□□□□ 0.08
TNFRSF1A-202ENST00000366159 SLC26A6Q9BXS9 759 aa15.56■□□□□ 0.08
TNFRSF1A-202ENST00000366159 IFIH1Q9BYX4 1025 aaKnown RBP15.56■□□□□ 0.08
TNFRSF1A-202ENST00000366159 AZI2Q9H6S1 392 aa15.56■□□□□ 0.08
TNFRSF1A-202ENST00000366159 INSL6Q9Y581 213 aa15.56■□□□□ 0.08
TNFRSF1A-202ENST00000366159 COL4A6Q14031 1691 aa15.56■□□□□ 0.08
TNFRSF1A-202ENST00000366159 TTC28Q96AY4 2481 aa15.55■□□□□ 0.08
TNFRSF1A-202ENST00000366159 COL4A4P53420 1690 aaPredicted RBP15.55■□□□□ 0.08
TNFRSF1A-202ENST00000366159 M0R2N6 131 aa15.55■□□□□ 0.08
TNFRSF1A-202ENST00000366159 IPO5O00410 1097 aaKnown RBP15.55■□□□□ 0.08
TNFRSF1A-202ENST00000366159 RPLP2P05387 115 aaKnown RBP15.55■□□□□ 0.08
TNFRSF1A-202ENST00000366159 ATP4AP20648 1035 aa15.55■□□□□ 0.08
TNFRSF1A-202ENST00000366159 ZNF76P36508 570 aa15.55■□□□□ 0.08
TNFRSF1A-202ENST00000366159 GRB10Q13322 594 aa15.55■□□□□ 0.08
TNFRSF1A-202ENST00000366159 LPIN1Q14693 890 aa15.55■□□□□ 0.08
TNFRSF1A-202ENST00000366159 CCDC60Q8IWA6 550 aaPredicted RBP15.55■□□□□ 0.08
TNFRSF1A-202ENST00000366159 MYOCDQ8IZQ8 938 aa15.55■□□□□ 0.08
TNFRSF1A-202ENST00000366159 BICD2Q8TD16 824 aa15.55■□□□□ 0.08
TNFRSF1A-202ENST00000366159 RASGRP4Q8TDF6 673 aa15.55■□□□□ 0.08
TNFRSF1A-202ENST00000366159 UPF3BQ9BZI7 483 aaKnown RBP15.55■□□□□ 0.08
TNFRSF1A-202ENST00000366159 SUGCTQ9HAC7 445 aa15.55■□□□□ 0.08
TNFRSF1A-202ENST00000366159 VPS54Q9P1Q0 977 aa15.55■□□□□ 0.08
TNFRSF1A-202ENST00000366159 PCDHA2Q9Y5H9 948 aa15.55■□□□□ 0.08
TNFRSF1A-202ENST00000366159 PRRC2BQ5JSZ5 2229 aaKnown RBP15.55■□□□□ 0.08
TNFRSF1A-202ENST00000366159 POTEB3A0JP26 581 aa15.54■□□□□ 0.08
TNFRSF1A-202ENST00000366159 GHRP10912 638 aa15.54■□□□□ 0.08
TNFRSF1A-202ENST00000366159 IGBP1P78318 339 aa15.54■□□□□ 0.08
TNFRSF1A-202ENST00000366159 SETQ01105 290 aaPredicted RBP15.54■□□□□ 0.08
TNFRSF1A-202ENST00000366159 AKAP17AQ02040 695 aaKnown RBP15.54■□□□□ 0.08
TNFRSF1A-202ENST00000366159 NPY5RQ15761 445 aa15.54■□□□□ 0.08
TNFRSF1A-202ENST00000366159 TJAP1Q5JTD0 557 aa15.54■□□□□ 0.08
TNFRSF1A-202ENST00000366159 FBXO47Q5MNV8 452 aa15.54■□□□□ 0.08
TNFRSF1A-202ENST00000366159 KRT40Q6A162 431 aa15.54■□□□□ 0.08
TNFRSF1A-202ENST00000366159 FAM117BQ6P1L5 589 aa15.54■□□□□ 0.08
TNFRSF1A-202ENST00000366159 POTEBQ6S5H4 581 aa15.54■□□□□ 0.08
TNFRSF1A-202ENST00000366159 RSPH3Q86UC2 560 aa15.54■□□□□ 0.08
TNFRSF1A-202ENST00000366159 CCDC148Q8NFR7 591 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms