RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 SUCLA2Q9P2R7 463 aaPredicted RBP14.41□□□□□ -0.1
CCDC144A-203ENST00000360495 ZNF608Q9ULD9 1512 aaPredicted RBP14.41□□□□□ -0.1
CCDC144A-203ENST00000360495 THOC5Q13769 683 aaKnown RBP14.41□□□□□ -0.1
CCDC144A-203ENST00000360495 KIF19Q2TAC6 998 aa14.41□□□□□ -0.1
CCDC144A-203ENST00000360495 RNF207Q6ZRF8 634 aa14.41□□□□□ -0.1
CCDC144A-203ENST00000360495 MCF2L2Q86YR7 1114 aa14.41□□□□□ -0.1
CCDC144A-203ENST00000360495 TEKT3Q9BXF9 490 aa14.41□□□□□ -0.1
CCDC144A-203ENST00000360495 PCDHA4Q9UN74 947 aa14.41□□□□□ -0.1
CCDC144A-203ENST00000360495 RTCBQ9Y3I0 505 aaKnown RBP14.41□□□□□ -0.1
CCDC144A-203ENST00000360495 CFAP69A5D8W1 941 aa14.41□□□□□ -0.1
CCDC144A-203ENST00000360495 APOA1P02647 267 aa14.41□□□□□ -0.1
CCDC144A-203ENST00000360495 TMED10P49755 219 aaKnown RBP14.41□□□□□ -0.1
CCDC144A-203ENST00000360495 VSNL1P62760 191 aa14.41□□□□□ -0.1
CCDC144A-203ENST00000360495 CEP55Q53EZ4 464 aa14.41□□□□□ -0.1
CCDC144A-203ENST00000360495 IP6K1Q92551 441 aa14.41□□□□□ -0.1
CCDC144A-203ENST00000360495 THAP11Q96EK4 314 aa14.41□□□□□ -0.1
CCDC144A-203ENST00000360495 RBM17Q96I25 401 aaKnown RBP14.41□□□□□ -0.1
CCDC144A-203ENST00000360495 NPR1P16066 1061 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 NR5A1Q13285 461 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 TMEM154Q6P9G4 183 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 CADPS2Q86UW7 1296 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 RASSF3Q86WH2 238 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 RASGRP4Q8TDF6 673 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 BTBD6Q96KE9 485 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 MLXIPQ9HAP2 919 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 THRAP3Q9Y2W1 955 aaKnown RBP14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 PCDH11XQ9BZA7 1347 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 PCDH11YQ9BZA8 1340 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 IFRD2Q12894 506 aaPredicted RBP14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 OLFML2BQ68BL8 750 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 TEX9Q8N6V9 391 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 KCTD6Q8NC69 237 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 ANO3Q9BYT9 981 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 GAP43P17677 238 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 RARS2Q5T160 578 aaKnown RBP14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 PPP1R2P3Q6NXS1 205 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 NFRKBQ6P4R8 1299 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 ZNF589Q86UQ0 364 aaPredicted RBP14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 RHOT2Q8IXI1 618 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 TAF1DQ9H5J8 278 aaPredicted RBP14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 MRPL40Q9NQ50 206 aaKnown RBP14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 HDAC6Q9UBN7 1215 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 ARHGEF12Q9NZN5 1544 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 SYNGAP1Q96PV0 1343 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 GTPBP10A4D1E9 387 aaKnown RBP14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 KCNA3P22001 575 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 CDC25AP30304 524 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 WDR70Q9NW82 654 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 TESPA1A2RU30 521 aaPredicted RBP14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 HNRNPCL2B2RXH8 293 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 EIF3HO15372 352 aaKnown RBP eCLIP14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 HNRNPCL1O60812 293 aaKnown RBP14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 ZSCAN20P17040 1043 aaPredicted RBP14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 GLG1Q92896 1179 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 GGA1Q9UJY5 639 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 ADGRG1Q9Y653 693 aa14.4□□□□□ -0.1
CCDC144A-203ENST00000360495 UGGT2Q9NYU1 1516 aa14.39□□□□□ -0.11
CCDC144A-203ENST00000360495 MDH1P40925 334 aaKnown RBP14.39□□□□□ -0.11
CCDC144A-203ENST00000360495 ACAD11Q709F0 780 aa14.39□□□□□ -0.11
CCDC144A-203ENST00000360495 GRAMD1AQ96CP6 724 aa14.39□□□□□ -0.11
CCDC144A-203ENST00000360495 CYP4F11Q9HBI6 524 aa14.39□□□□□ -0.11
CCDC144A-203ENST00000360495 PICK1Q9NRD5 415 aa14.39□□□□□ -0.11
CCDC144A-203ENST00000360495 YTHDC2Q9H6S0 1430 aaKnown RBP14.39□□□□□ -0.11
CCDC144A-203ENST00000360495 TARSL2A2RTX5 802 aaKnown RBP14.39□□□□□ -0.11
CCDC144A-203ENST00000360495 PSMD7P51665 324 aa14.39□□□□□ -0.11
CCDC144A-203ENST00000360495 TSTA3Q13630 321 aaPredicted RBP14.39□□□□□ -0.11
CCDC144A-203ENST00000360495 ATG3Q9NT62 314 aa14.39□□□□□ -0.11
CCDC144A-203ENST00000360495 A1BGP04217 495 aa14.39□□□□□ -0.11
CCDC144A-203ENST00000360495 ARL4CP56559 192 aa14.39□□□□□ -0.11
CCDC144A-203ENST00000360495 EIF4A1P60842 406 aaKnown RBP14.39□□□□□ -0.11
CCDC144A-203ENST00000360495 CYTH1Q15438 398 aa14.39□□□□□ -0.11
CCDC144A-203ENST00000360495 ANKRD7Q92527 254 aa14.39□□□□□ -0.11
CCDC144A-203ENST00000360495 NCLNQ969V3 563 aa14.39□□□□□ -0.11
CCDC144A-203ENST00000360495 L3MBTL1Q9Y468 752 aa14.39□□□□□ -0.11
CCDC144A-203ENST00000360495 HNRNPDLO14979 420 aaKnown RBP14.39□□□□□ -0.11
CCDC144A-203ENST00000360495 BPIFA3Q9BQP9 254 aa14.39□□□□□ -0.11
CCDC144A-203ENST00000360495 PCDHB6Q9Y5E3 794 aa14.39□□□□□ -0.11
CCDC144A-203ENST00000360495 TCP10Q12799 353 aa14.38□□□□□ -0.11
CCDC144A-203ENST00000360495 ZMYM1Q5SVZ6 1142 aa14.38□□□□□ -0.11
CCDC144A-203ENST00000360495 ZC3H15Q8WU90 426 aaKnown RBP14.38□□□□□ -0.11
CCDC144A-203ENST00000360495 ASCC2Q9H1I8 757 aaPredicted RBP14.38□□□□□ -0.11
CCDC144A-203ENST00000360495 TBC1D23Q9NUY8 699 aa14.38□□□□□ -0.11
CCDC144A-203ENST00000360495 GGT7Q9UJ14 662 aa14.38□□□□□ -0.11
CCDC144A-203ENST00000360495 NCK2O43639 380 aa14.38□□□□□ -0.11
CCDC144A-203ENST00000360495 CHEK2O96017 543 aa14.38□□□□□ -0.11
CCDC144A-203ENST00000360495 AP1B1Q10567 949 aa14.38□□□□□ -0.11
CCDC144A-203ENST00000360495 SPATA21Q7Z572 469 aa14.38□□□□□ -0.11
CCDC144A-203ENST00000360495 LONP2Q86WA8 852 aa14.38□□□□□ -0.11
CCDC144A-203ENST00000360495 LRRC47Q8N1G4 583 aaKnown RBP14.38□□□□□ -0.11
CCDC144A-203ENST00000360495 CCT8L2Q96SF2 557 aa14.38□□□□□ -0.11
CCDC144A-203ENST00000360495 EMILIN3Q9NT22 766 aa14.38□□□□□ -0.11
CCDC144A-203ENST00000360495 SUN2Q9UH99 717 aa14.38□□□□□ -0.11
CCDC144A-203ENST00000360495 GRID2IPA4D2P6 1211 aa14.38□□□□□ -0.11
CCDC144A-203ENST00000360495 KRT75O95678 551 aa14.38□□□□□ -0.11
CCDC144A-203ENST00000360495 KRT8P05787 483 aa14.38□□□□□ -0.11
CCDC144A-203ENST00000360495 MKRN3Q13064 507 aaKnown RBP14.38□□□□□ -0.11
CCDC144A-203ENST00000360495 RABGAP1LQ5R372 815 aa14.38□□□□□ -0.11
CCDC144A-203ENST00000360495 PAWRQ96IZ0 340 aaKnown RBP14.38□□□□□ -0.11
CCDC144A-203ENST00000360495 CCDC195A0A1B0GUA6 201 aa14.38□□□□□ -0.11
CCDC144A-203ENST00000360495 POLR2MP0CAP2 368 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms