RNA–Protein interactions for RNA: ENST00000360218.2

CTSE-202, Transcript of cathepsin E, humanhuman

TSL 1 (best) BASIC

Gene CTSE, Length 2,071 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSE-202ENST00000360218 NIPA1Q7RTP0 329 aa12.29□□□□□ -0.44
CTSE-202ENST00000360218 ATRIPQ8WXE1 791 aa12.29□□□□□ -0.44
CTSE-202ENST00000360218 PCMTD1Q96MG8 357 aaPredicted RBP12.29□□□□□ -0.44
CTSE-202ENST00000360218 RIT2Q99578 217 aa12.29□□□□□ -0.44
CTSE-202ENST00000360218 AGO4Q9HCK5 861 aaKnown RBP12.29□□□□□ -0.44
CTSE-202ENST00000360218 CAPN11Q9UMQ6 739 aa12.29□□□□□ -0.44
CTSE-202ENST00000360218 AFG3L2Q9Y4W6 797 aa12.29□□□□□ -0.44
CTSE-202ENST00000360218 ADGRG1Q9Y653 693 aa12.29□□□□□ -0.44
CTSE-202ENST00000360218 DHX15O43143 795 aaKnown RBP12.28□□□□□ -0.44
CTSE-202ENST00000360218 TBCAO75347 108 aaKnown RBP12.28□□□□□ -0.44
CTSE-202ENST00000360218 FDX1P10109 184 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 BAATQ14032 418 aaPredicted RBP12.28□□□□□ -0.44
CTSE-202ENST00000360218 FKBP15Q5T1M5 1219 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 EPM2AIP1Q7L775 607 aaPredicted RBP12.28□□□□□ -0.44
CTSE-202ENST00000360218 MIER3Q7Z3K6 550 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 ERGIC2Q96RQ1 377 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 LXNQ9BS40 222 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 NDST4Q9H3R1 872 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 JADE2Q9NQC1 790 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 PXMP2Q9NR77 195 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 MAP3K20Q9NYL2 800 aaKnown RBP12.28□□□□□ -0.44
CTSE-202ENST00000360218 TMOD4Q9NZQ9 345 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 SNCAIPQ9Y6H5 919 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 KIAA1217Q5T5P2 1943 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 DOCK5Q9H7D0 1870 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 SFI1A8K8P3 1242 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 FANCGO15287 622 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 PRPF6O94906 941 aaKnown RBP12.28□□□□□ -0.44
CTSE-202ENST00000360218 CCDC175P0C221 793 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 YBX3P16989 372 aaKnown RBP eCLIP12.28□□□□□ -0.44
CTSE-202ENST00000360218 HOXD13P35453 343 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 ETF1P62495 437 aaKnown RBP12.28□□□□□ -0.44
CTSE-202ENST00000360218 FKBP3Q00688 224 aaKnown RBP12.28□□□□□ -0.44
CTSE-202ENST00000360218 MTMR1Q13613 665 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 VGLL4Q14135 290 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 TMEM132BQ14DG7 1078 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 CCDC40Q4G0X9 1142 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 CYP26C1Q6V0L0 522 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 CATSPERGQ6ZRH7 1159 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 C1orf186Q6ZWK4 172 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 TMTC1Q8IUR5 882 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 KCTD17Q8N5Z5 321 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 ACRBPQ8NEB7 543 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 RMDN3Q96TC7 470 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 DNAJC7Q99615 494 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 CHP1Q99653 195 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 PDCD2LQ9BRP1 358 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 ADARB2Q9NS39 739 aaKnown RBP12.28□□□□□ -0.44
CTSE-202ENST00000360218 AGPAT5Q9NUQ2 364 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 DNAI1Q9UI46 699 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 ZNF214Q9UL59 606 aaPredicted RBP12.28□□□□□ -0.44
CTSE-202ENST00000360218 LUC7L2Q9Y383 392 aaKnown RBP12.28□□□□□ -0.44
CTSE-202ENST00000360218 COL4A3BPQ9Y5P4 624 aa12.28□□□□□ -0.44
CTSE-202ENST00000360218 KIF20AO95235 890 aa12.27□□□□□ -0.45
CTSE-202ENST00000360218 TRIM21P19474 475 aaKnown RBP12.27□□□□□ -0.45
CTSE-202ENST00000360218 COG2Q14746 738 aa12.27□□□□□ -0.45
CTSE-202ENST00000360218 ARHGEF16Q5VV41 709 aa12.27□□□□□ -0.45
CTSE-202ENST00000360218 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.27□□□□□ -0.45
CTSE-202ENST00000360218 SAMD3Q8N6K7 520 aa12.27□□□□□ -0.45
CTSE-202ENST00000360218 OR8K1Q8NGG5 319 aa12.27□□□□□ -0.45
CTSE-202ENST00000360218 CNKSR2Q8WXI2 1034 aa12.27□□□□□ -0.45
CTSE-202ENST00000360218 CEP63Q96MT8 703 aa12.27□□□□□ -0.45
CTSE-202ENST00000360218 NACC1Q96RE7 527 aa12.27□□□□□ -0.45
CTSE-202ENST00000360218 PNMA2Q9UL42 364 aa12.27□□□□□ -0.45
CTSE-202ENST00000360218 ADAMTS5Q9UNA0 930 aa12.27□□□□□ -0.45
CTSE-202ENST00000360218 SIK3Q9Y2K2 1263 aa12.27□□□□□ -0.45
CTSE-202ENST00000360218 WDR81Q562E7 1941 aa12.27□□□□□ -0.45
CTSE-202ENST00000360218 PHLPP2Q6ZVD8 1323 aa12.27□□□□□ -0.45
CTSE-202ENST00000360218 GOLGA6L9A6NEM1 432 aa12.26□□□□□ -0.45
CTSE-202ENST00000360218 CTIFO43310 598 aaKnown RBP12.26□□□□□ -0.45
CTSE-202ENST00000360218 FAM13AO94988 1023 aa12.26□□□□□ -0.45
CTSE-202ENST00000360218 MUTP22033 750 aa12.26□□□□□ -0.45
CTSE-202ENST00000360218 WDR59Q6PJI9 974 aa12.26□□□□□ -0.45
CTSE-202ENST00000360218 ZC3H3Q8IXZ2 948 aaKnown RBP12.26□□□□□ -0.45
CTSE-202ENST00000360218 PIAS4Q8N2W9 510 aaPredicted RBP12.26□□□□□ -0.45
CTSE-202ENST00000360218 CCDC155Q8N6L0 562 aa12.26□□□□□ -0.45
CTSE-202ENST00000360218 NUP58Q9BVL2 599 aa12.26□□□□□ -0.45
CTSE-202ENST00000360218 A0A0G2JMZ2 1700 aa12.26□□□□□ -0.45
CTSE-202ENST00000360218 SPDYE16A6NNV3 312 aaPredicted RBP12.26□□□□□ -0.45
CTSE-202ENST00000360218 EPHB6O15197 1021 aa12.26□□□□□ -0.45
CTSE-202ENST00000360218 GCNT3O95395 438 aa12.26□□□□□ -0.45
CTSE-202ENST00000360218 GAP43P17677 238 aa12.26□□□□□ -0.45
CTSE-202ENST00000360218 OAZ1P54368 228 aa12.26□□□□□ -0.45
CTSE-202ENST00000360218 NEK9Q8TD19 979 aa12.26□□□□□ -0.45
CTSE-202ENST00000360218 DCPSQ96C86 337 aaKnown RBP12.26□□□□□ -0.45
CTSE-202ENST00000360218 LZTFL1Q9NQ48 299 aa12.26□□□□□ -0.45
CTSE-202ENST00000360218 TESPA1A2RU30 521 aaPredicted RBP12.25□□□□□ -0.45
CTSE-202ENST00000360218 ATP9AO75110 1047 aa12.25□□□□□ -0.45
CTSE-202ENST00000360218 TUBB4AP04350 444 aa12.25□□□□□ -0.45
CTSE-202ENST00000360218 NMT1P30419 496 aaKnown RBP12.25□□□□□ -0.45
CTSE-202ENST00000360218 MAP3K9P80192 1104 aa12.25□□□□□ -0.45
CTSE-202ENST00000360218 KCNA1Q09470 495 aa12.25□□□□□ -0.45
CTSE-202ENST00000360218 ADAM9Q13443 819 aa12.25□□□□□ -0.45
CTSE-202ENST00000360218 PLS1Q14651 629 aa12.25□□□□□ -0.45
CTSE-202ENST00000360218 KNOP1Q1ED39 458 aaKnown RBP12.25□□□□□ -0.45
CTSE-202ENST00000360218 EDRF1Q3B7T1 1238 aa12.25□□□□□ -0.45
CTSE-202ENST00000360218 SH3D19Q5HYK7 790 aa12.25□□□□□ -0.45
CTSE-202ENST00000360218 TREML2Q5T2D2 321 aa12.25□□□□□ -0.45
CTSE-202ENST00000360218 PPP4R3CPQ6ZMV5 832 aa12.25□□□□□ -0.45
CTSE-202ENST00000360218 MYCT1Q8N699 235 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms