RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 SEPT12Q8IYM1 358 aa9.44□□□□□ -0.9
RFX3-202ENST00000358730 MBOAT7Q96N66 472 aa9.44□□□□□ -0.9
RFX3-202ENST00000358730 REEP2Q9BRK0 252 aa9.44□□□□□ -0.9
RFX3-202ENST00000358730 PACSIN2Q9UNF0 486 aaPredicted RBP9.44□□□□□ -0.9
RFX3-202ENST00000358730 RRP15Q9Y3B9 282 aaKnown RBP9.44□□□□□ -0.9
RFX3-202ENST00000358730 MYO1CO00159 1063 aa9.44□□□□□ -0.9
RFX3-202ENST00000358730 ACTN1P12814 892 aa9.44□□□□□ -0.9
RFX3-202ENST00000358730 PSMC6P62333 389 aa9.44□□□□□ -0.9
RFX3-202ENST00000358730 ICA1Q05084 483 aa9.44□□□□□ -0.9
RFX3-202ENST00000358730 DCAF17Q5H9S7 520 aaPredicted RBP9.44□□□□□ -0.9
RFX3-202ENST00000358730 MEX3CQ5U5Q3 659 aaKnown RBP9.44□□□□□ -0.9
RFX3-202ENST00000358730 MOXD1Q6UVY6 613 aa9.44□□□□□ -0.9
RFX3-202ENST00000358730 KIAA0825Q8IV33 1275 aa9.44□□□□□ -0.9
RFX3-202ENST00000358730 RUFY1Q96T51 708 aa9.44□□□□□ -0.9
RFX3-202ENST00000358730 P2RX7Q99572 595 aaKnown RBP9.44□□□□□ -0.9
RFX3-202ENST00000358730 PLEKHA4Q9H4M7 779 aa9.44□□□□□ -0.9
RFX3-202ENST00000358730 AIPL1Q9NZN9 384 aa9.44□□□□□ -0.9
RFX3-202ENST00000358730 RNF14Q9UBS8 474 aa9.44□□□□□ -0.9
RFX3-202ENST00000358730 ARMCX3Q9UH62 379 aaPredicted RBP9.44□□□□□ -0.9
RFX3-202ENST00000358730 DNM3Q9UQ16 869 aa9.44□□□□□ -0.9
RFX3-202ENST00000358730 PCDHGC5Q9Y5F6 944 aa9.44□□□□□ -0.9
RFX3-202ENST00000358730 PCDHAC2Q9Y5I4 1007 aa9.44□□□□□ -0.9
RFX3-202ENST00000358730 DDTLA6NHG4 134 aaPredicted RBP9.43□□□□□ -0.9
RFX3-202ENST00000358730 SPDYE3A6NKU9 549 aa9.43□□□□□ -0.9
RFX3-202ENST00000358730 TNFRSF8P28908 595 aa9.43□□□□□ -0.9
RFX3-202ENST00000358730 RBM5P52756 815 aaKnown RBP eCLIP9.43□□□□□ -0.9
RFX3-202ENST00000358730 CYP4A11Q02928 519 aa9.43□□□□□ -0.9
RFX3-202ENST00000358730 GIT2Q14161 759 aa9.43□□□□□ -0.9
RFX3-202ENST00000358730 KNOP1Q1ED39 458 aaKnown RBP9.43□□□□□ -0.9
RFX3-202ENST00000358730 TSEN2Q8NCE0 465 aaKnown RBP9.43□□□□□ -0.9
RFX3-202ENST00000358730 SPAG5Q96R06 1193 aa9.43□□□□□ -0.9
RFX3-202ENST00000358730 AMNQ9BXJ7 453 aa9.43□□□□□ -0.9
RFX3-202ENST00000358730 DBNDD1Q9H9R9 158 aa9.43□□□□□ -0.9
RFX3-202ENST00000358730 HEXIM1O94992 359 aaKnown RBP9.43□□□□□ -0.9
RFX3-202ENST00000358730 GDF11O95390 407 aa9.43□□□□□ -0.9
RFX3-202ENST00000358730 AFPP02771 609 aaKnown RBP9.43□□□□□ -0.9
RFX3-202ENST00000358730 MYBP10242 640 aa9.43□□□□□ -0.9
RFX3-202ENST00000358730 TAL1P17542 331 aaPredicted RBP9.43□□□□□ -0.9
RFX3-202ENST00000358730 GLE1Q53GS7 698 aaKnown RBP9.43□□□□□ -0.9
RFX3-202ENST00000358730 SLC27A3Q5K4L6 730 aa9.43□□□□□ -0.9
RFX3-202ENST00000358730 CRYGNQ8WXF5 182 aa9.43□□□□□ -0.9
RFX3-202ENST00000358730 ZDHHC15Q96MV8 337 aa9.43□□□□□ -0.9
RFX3-202ENST00000358730 TSPYL1Q9H0U9 437 aa9.43□□□□□ -0.9
RFX3-202ENST00000358730 NYAP2Q9P242 653 aa9.43□□□□□ -0.9
RFX3-202ENST00000358730 RSPH14Q9UHP6 348 aa9.43□□□□□ -0.9
RFX3-202ENST00000358730 ESYT3A0FGR9 886 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 GRID2IPA4D2P6 1211 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 ZSCAN5CA6NGD5 496 aaPredicted RBP9.42□□□□□ -0.9
RFX3-202ENST00000358730 FAM86B1E9PN63 330 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 HSF2BPO75031 334 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 GLI1P08151 1106 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 FAM86B2P0C5J1 330 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 SPATA31C1P0DKV0 1188 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 XRCC5P13010 732 aaKnown RBP9.42□□□□□ -0.9
RFX3-202ENST00000358730 NPR1P16066 1061 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 SLC9A1P19634 815 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 RPA1P27694 616 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 PTK2Q05397 1052 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 EXOC3L4Q17RC7 722 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 MEI1Q5TIA1 1274 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 TCERG1LQ5VWI1 586 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 FBXO11Q86XK2 927 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 IFT20Q8IY31 132 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 C10orf67Q8IYJ2 551 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 SYT2Q8N9I0 419 aaPredicted RBP9.42□□□□□ -0.9
RFX3-202ENST00000358730 CAVIN3Q969G5 261 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 MKL1Q969V6 931 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 LENG9Q96B70 501 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 TMX4Q9H1E5 349 aaPredicted RBP9.42□□□□□ -0.9
RFX3-202ENST00000358730 PI4KBQ9UBF8 816 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 FEZ2Q9UHY8 353 aaPredicted RBP9.42□□□□□ -0.9
RFX3-202ENST00000358730 TRAF3IP3Q9Y228 551 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 SPATA31A6Q5VVP1 1343 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 COL11A2P13942 1736 aaPredicted RBP9.42□□□□□ -0.9
RFX3-202ENST00000358730 RSPH10B2B2RC85 870 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 GOLGA8KD6RF30 607 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 F5H6K3 240 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 TRIM66O15016 1216 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 TBX3O15119 743 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 CALUO43852 315 aaPredicted RBP9.42□□□□□ -0.9
RFX3-202ENST00000358730 OPA1O60313 960 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 TBCAO75347 108 aaKnown RBP9.42□□□□□ -0.9
RFX3-202ENST00000358730 RSPH10BP0C881 870 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 UCHL3P15374 230 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 SREBF1P36956 1147 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 RNASE9P60153 205 aaKnown RBP9.42□□□□□ -0.9
RFX3-202ENST00000358730 GUCY2DQ02846 1103 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 KLRC3Q07444 240 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 PPFIA1Q13136 1202 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 Q4G0T1 1027 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 FRMD5Q7Z6J6 570 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 INPP4AQ96PE3 977 aaPredicted RBP9.42□□□□□ -0.9
RFX3-202ENST00000358730 KCNQ5Q9NR82 932 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 PPFIA4O75335 1185 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 AKAP3O75969 853 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 GCNT3O95395 438 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 NDUFB10O96000 172 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 HOXA13P31271 388 aaPredicted RBP9.42□□□□□ -0.9
RFX3-202ENST00000358730 HOXD13P35453 343 aa9.42□□□□□ -0.9
RFX3-202ENST00000358730 CARSP49589 748 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms