RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 HSPA1AP0DMV8 641 aaKnown RBP9.53□□□□□ -0.88
CTNND1-201ENST00000358694 HSPA1BP0DMV9 641 aaKnown RBP9.53□□□□□ -0.88
CTNND1-201ENST00000358694 ESRRAP11474 423 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-201ENST00000358694 KRT4P19013 534 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 POLE2P56282 527 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 UBE3AQ05086 875 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 SURF1Q15526 300 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 IFNL3Q8IZI9 196 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 CNOT6LQ96LI5 555 aaKnown RBP9.53□□□□□ -0.88
CTNND1-201ENST00000358694 KLC2Q9H0B6 622 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 KLHL8Q9P2G9 620 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-201ENST00000358694 SNAPC4Q5SXM2 1469 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 EXOC1LA0A1B0GW35 172 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 GDF11O95390 407 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 CACNB1Q02641 598 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-201ENST00000358694 GABPB1Q06547 395 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-201ENST00000358694 RBBP7Q16576 425 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 TAS2R42Q7RTR8 314 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 TBC1D19Q8N5T2 526 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 FANCBQ8NB91 859 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 CYTH2Q99418 400 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 SLC52A2Q9HAB3 445 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 TNKSO95271 1327 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 ASMTLO95671 621 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 CA4P22748 312 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 SLCO1A2P46721 670 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 IFT88Q13099 833 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 DDX53Q86TM3 631 aaKnown RBP9.53□□□□□ -0.88
CTNND1-201ENST00000358694 TCP11Q8WWU5 503 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 SPDYE5A6NIY4 337 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 ORC4O43929 436 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 DTNBO60941 627 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 VAMP4O75379 141 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 SPDYE7PQ495Y7 208 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 PPP6R3Q5H9R7 873 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-201ENST00000358694 MEI1Q5TIA1 1274 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 WDR11Q9BZH6 1224 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 PCDHGB4Q9UN71 923 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 PPP2R2CQ9Y2T4 447 aa9.53□□□□□ -0.88
CTNND1-201ENST00000358694 ZNF197O14709 1029 aa9.52□□□□□ -0.88
CTNND1-201ENST00000358694 KRT7P08729 469 aa9.52□□□□□ -0.88
CTNND1-201ENST00000358694 RLBP1P12271 317 aa9.52□□□□□ -0.88
CTNND1-201ENST00000358694 CARSP49589 748 aaKnown RBP9.52□□□□□ -0.88
CTNND1-201ENST00000358694 MED21Q13503 144 aa9.52□□□□□ -0.88
CTNND1-201ENST00000358694 KRT72Q14CN4 511 aa9.52□□□□□ -0.88
CTNND1-201ENST00000358694 ZNF827Q17R98 1081 aa9.52□□□□□ -0.88
CTNND1-201ENST00000358694 LRRC23Q53EV4 343 aaPredicted RBP9.52□□□□□ -0.88
CTNND1-201ENST00000358694 C2orf69Q8N8R5 385 aa9.52□□□□□ -0.88
CTNND1-201ENST00000358694 GPBP1L1Q9HC44 474 aaPredicted RBP9.52□□□□□ -0.88
CTNND1-201ENST00000358694 PNMA3Q9UL41 463 aa9.52□□□□□ -0.88
CTNND1-201ENST00000358694 IFT140Q96RY7 1462 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 DDAH1O94760 285 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 DDIT3P35638 169 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 AARSP49588 968 aaKnown RBP eCLIP9.52□□□□□ -0.893e-6■□□□□ 10.9
CTNND1-201ENST00000358694 RAD51Q06609 339 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 E4F1Q66K89 784 aaPredicted RBP9.52□□□□□ -0.89
CTNND1-201ENST00000358694 PDXDC2PQ6P474 469 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 PYROXD1Q8WU10 500 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 MSTO1Q9BUK6 570 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 DSCC1Q9BVC3 393 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 TRIM54Q9BYV2 358 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 GSNP06396 782 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 CUL1Q13616 776 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 DDX42Q86XP3 938 aaKnown RBP eCLIP9.52□□□□□ -0.89
CTNND1-201ENST00000358694 CRLF3Q8IUI8 442 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 ARHGAP10A1A4S6 786 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 CCDC151A5D8V7 595 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 IMPDH2P12268 514 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 DDX5P17844 614 aaKnown RBP9.52□□□□□ -0.89
CTNND1-201ENST00000358694 BRD2P25440 801 aaKnown RBP9.52□□□□□ -0.89
CTNND1-201ENST00000358694 PSMA2P25787 234 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 CENPAP49450 140 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 CATSPER3Q86XQ3 398 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 TEX2Q8IWB9 1127 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 NLGN1Q8N2Q7 840 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 SYMPKQ92797 1274 aaKnown RBP9.52□□□□□ -0.89
CTNND1-201ENST00000358694 EEF2KMTQ96G04 330 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.52□□□□□ -0.894e-16■□□□□ 9.4
CTNND1-201ENST00000358694 MAGEB5Q9BZ81 275 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 NGRNQ9NPE2 291 aaKnown RBP9.52□□□□□ -0.89
CTNND1-201ENST00000358694 NEK2P51955 445 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 CCDC157Q569K6 752 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 MMS22LQ6ZRQ5 1243 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 G2E3Q7L622 706 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 ERICH1Q86X53 443 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 TTC8Q8TAM2 541 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 LARP4BQ92615 738 aaKnown RBP9.52□□□□□ -0.89
CTNND1-201ENST00000358694 ACAP3Q96P50 834 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 CACNA2D2Q9NY47 1150 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 SEL1LQ9UBV2 794 aa9.52□□□□□ -0.89
CTNND1-201ENST00000358694 PRR23D1E9PI22 279 aaPredicted RBP9.51□□□□□ -0.89
CTNND1-201ENST00000358694 MEIS1O00470 390 aa9.51□□□□□ -0.89
CTNND1-201ENST00000358694 GFPT2O94808 682 aa9.51□□□□□ -0.89
CTNND1-201ENST00000358694 PRR23D2P0DMB1 279 aaPredicted RBP9.51□□□□□ -0.89
CTNND1-201ENST00000358694 DEUP1Q05D60 604 aa9.51□□□□□ -0.89
CTNND1-201ENST00000358694 E2F5Q15329 346 aa9.51□□□□□ -0.89
CTNND1-201ENST00000358694 ACAD11Q709F0 780 aa9.51□□□□□ -0.89
CTNND1-201ENST00000358694 APPL2Q8NEU8 664 aa9.51□□□□□ -0.89
CTNND1-201ENST00000358694 CEP70Q8NHQ1 597 aa9.51□□□□□ -0.89
CTNND1-201ENST00000358694 PPP2R3CQ969Q6 453 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms