RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 PDXDC1Q6P996 788 aa13.32□□□□□ -0.28
SIRPA-201ENST00000356025 DDX42Q86XP3 938 aaKnown RBP eCLIP13.32□□□□□ -0.28
SIRPA-201ENST00000356025 SP8Q8IXZ3 490 aa13.32□□□□□ -0.28
SIRPA-201ENST00000356025 GOLGA5Q8TBA6 731 aa13.32□□□□□ -0.28
SIRPA-201ENST00000356025 PKD1L3Q7Z443 1732 aa13.32□□□□□ -0.28
SIRPA-201ENST00000356025 USP54Q70EL1 1684 aa13.32□□□□□ -0.28
SIRPA-201ENST00000356025 BACH1O14867 736 aa13.32□□□□□ -0.28
SIRPA-201ENST00000356025 CALUO43852 315 aaPredicted RBP13.32□□□□□ -0.28
SIRPA-201ENST00000356025 TCP1P17987 556 aaKnown RBP13.32□□□□□ -0.28
SIRPA-201ENST00000356025 TNFAIP3P21580 790 aa13.32□□□□□ -0.28
SIRPA-201ENST00000356025 COPB2P35606 906 aa13.32□□□□□ -0.28
SIRPA-201ENST00000356025 ALKBH5Q6P6C2 394 aaKnown RBP13.32□□□□□ -0.28
SIRPA-201ENST00000356025 TRAPPC11Q7Z392 1133 aa13.32□□□□□ -0.28
SIRPA-201ENST00000356025 DAGLBQ8NCG7 672 aa13.32□□□□□ -0.28
SIRPA-201ENST00000356025 IPO4Q8TEX9 1081 aaKnown RBP13.32□□□□□ -0.28
SIRPA-201ENST00000356025 HOOK2Q96ED9 719 aa13.32□□□□□ -0.28
SIRPA-201ENST00000356025 BICD1Q96G01 975 aa13.32□□□□□ -0.28
SIRPA-201ENST00000356025 SNX12Q9UMY4 172 aa13.32□□□□□ -0.28
SIRPA-201ENST00000356025 MYH14Q7Z406 1995 aaKnown RBP13.32□□□□□ -0.28
SIRPA-201ENST00000356025 SHTN1A0MZ66 631 aa13.32□□□□□ -0.28
SIRPA-201ENST00000356025 ZNF211Q13398 564 aaPredicted RBP13.32□□□□□ -0.28
SIRPA-201ENST00000356025 COL23A1Q86Y22 540 aaPredicted RBP13.32□□□□□ -0.28
SIRPA-201ENST00000356025 PRMT6Q96LA8 375 aaPredicted RBP13.32□□□□□ -0.28
SIRPA-201ENST00000356025 CCDC17Q96LX7 622 aa13.32□□□□□ -0.28
SIRPA-201ENST00000356025 ARHGEF10LQ9HCE6 1279 aa13.32□□□□□ -0.28
SIRPA-201ENST00000356025 TESPA1A2RU30 521 aaPredicted RBP13.31□□□□□ -0.28
SIRPA-201ENST00000356025 NPR1P16066 1061 aa13.31□□□□□ -0.28
SIRPA-201ENST00000356025 CEP85LQ5SZL2 805 aa13.31□□□□□ -0.28
SIRPA-201ENST00000356025 DDX47Q9H0S4 455 aaKnown RBP13.31□□□□□ -0.28
SIRPA-201ENST00000356025 EHD4Q9H223 541 aa13.31□□□□□ -0.28
SIRPA-201ENST00000356025 KRIT1O00522 736 aa13.31□□□□□ -0.28
SIRPA-201ENST00000356025 AFPP02771 609 aaKnown RBP13.31□□□□□ -0.28
SIRPA-201ENST00000356025 IL1R1P14778 569 aa13.31□□□□□ -0.28
SIRPA-201ENST00000356025 CYP11B2P19099 503 aa13.31□□□□□ -0.28
SIRPA-201ENST00000356025 TMEM132AQ24JP5 1023 aa13.31□□□□□ -0.28
SIRPA-201ENST00000356025 TTC31Q49AM3 519 aaPredicted RBP13.31□□□□□ -0.28
SIRPA-201ENST00000356025 FAM186BQ8IYM0 893 aa13.31□□□□□ -0.28
SIRPA-201ENST00000356025 ZNF577Q9BSK1 485 aa13.31□□□□□ -0.28
SIRPA-201ENST00000356025 ZNF277Q9NRM2 450 aaPredicted RBP13.31□□□□□ -0.28
SIRPA-201ENST00000356025 CTTNBP2NLQ9P2B4 639 aa13.31□□□□□ -0.28
SIRPA-201ENST00000356025 PLAGL2Q9UPG8 496 aa13.31□□□□□ -0.28
SIRPA-201ENST00000356025 GJA3Q9Y6H8 435 aa13.31□□□□□ -0.28
SIRPA-201ENST00000356025 LRP6O75581 1613 aa13.31□□□□□ -0.28
SIRPA-201ENST00000356025 ABCB11O95342 1321 aa13.31□□□□□ -0.28
SIRPA-201ENST00000356025 LAMB4A4D0S4 1761 aa13.31□□□□□ -0.28
SIRPA-201ENST00000356025 K7ENM7 598 aa13.31□□□□□ -0.28
SIRPA-201ENST00000356025 KRT14P02533 472 aa13.31□□□□□ -0.28
SIRPA-201ENST00000356025 EIF2AK2P19525 551 aaKnown RBP13.31□□□□□ -0.28
SIRPA-201ENST00000356025 APOBEC3HQ6NTF7 200 aaKnown RBP13.31□□□□□ -0.28
SIRPA-201ENST00000356025 GBP6Q6ZN66 633 aa13.31□□□□□ -0.28
SIRPA-201ENST00000356025 SLFN12Q8IYM2 578 aa13.31□□□□□ -0.28
SIRPA-201ENST00000356025 BCAS4Q8TDM0 211 aa13.31□□□□□ -0.28
SIRPA-201ENST00000356025 SH2D4AQ9H788 454 aa13.31□□□□□ -0.28
SIRPA-201ENST00000356025 PPANQ9NQ55 473 aaKnown RBP13.31□□□□□ -0.28
SIRPA-201ENST00000356025 GCOM1H8Y6P7 765 aaPredicted RBP13.3□□□□□ -0.28
SIRPA-201ENST00000356025 PSMD14O00487 310 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 NR3C1P04150 777 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 POLR2MP0CAP2 368 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 CARSP49589 748 aaKnown RBP13.3□□□□□ -0.28
SIRPA-201ENST00000356025 LIG3P49916 1009 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 WDR78Q5VTH9 848 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 GLYCTKQ8IVS8 523 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 FAM71BQ8TC56 605 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 SCFD1Q8WVM8 642 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 RUSC1Q9BVN2 902 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 SPEF2Q9C093 1822 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 SERPING1P05155 500 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 STAT1P42224 750 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 STAT2P52630 851 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 PDCLQ13371 301 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 COG2Q14746 738 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 TNIP1Q15025 636 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 IFT20Q8IY31 132 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 EXOC4Q96A65 974 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 FAM212AQ96EL1 285 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 MTMR9Q96QG7 549 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 EIF2AK1Q9BQI3 630 aaKnown RBP13.3□□□□□ -0.28
SIRPA-201ENST00000356025 SALL4Q9UJQ4 1053 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 FAM86B1E9PN63 330 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 POLRMTO00411 1230 aaKnown RBP13.3□□□□□ -0.28
SIRPA-201ENST00000356025 ATP8B1O43520 1251 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 IVLP07476 585 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 FAM86B2P0C5J1 330 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 VPS41P49754 854 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 PTK2Q05397 1052 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 PRAMEF18Q5VWM3 479 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 OR2W6PQ8NHA6 318 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 ERGIC2Q96RQ1 377 aa13.3□□□□□ -0.28
SIRPA-201ENST00000356025 NDUFAB1O14561 156 aa13.29□□□□□ -0.28
SIRPA-201ENST00000356025 FLOT1O75955 427 aa13.29□□□□□ -0.28
SIRPA-201ENST00000356025 H2AFZP0C0S5 128 aa13.29□□□□□ -0.28
SIRPA-201ENST00000356025 SSTR3P32745 418 aaPredicted RBP13.29□□□□□ -0.28
SIRPA-201ENST00000356025 FXR2P51116 673 aaKnown RBP eCLIP13.29□□□□□ -0.28
SIRPA-201ENST00000356025 PDIA5Q14554 519 aa13.29□□□□□ -0.28
SIRPA-201ENST00000356025 H2AFVQ71UI9 128 aa13.29□□□□□ -0.28
SIRPA-201ENST00000356025 PPM1KQ8N3J5 372 aa13.29□□□□□ -0.28
SIRPA-201ENST00000356025 CCPG1Q9ULG6 757 aa13.29□□□□□ -0.28
SIRPA-201ENST00000356025 TMEM150BA6NC51 233 aa13.29□□□□□ -0.28
SIRPA-201ENST00000356025 KIAA0754O94854 1291 aa13.29□□□□□ -0.28
SIRPA-201ENST00000356025 DLATP10515 647 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms